Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00218
         (673 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g09450.1 68414.m01057 haspin-related similar to haspin (GI:92...    37   0.011
At1g43670.1 68414.m05016 fructose-1,6-bisphosphatase, putative /...    29   3.7  
At1g32560.1 68414.m04018 late embryogenesis abundant group 1 dom...    29   3.7  
At1g20470.1 68414.m02551 auxin-responsive family protein similar...    29   3.7  
At3g26125.1 68416.m03258 cytochrome P450, putative                     28   4.9  
At3g28040.1 68416.m03500 leucine-rich repeat transmembrane prote...    28   6.5  
At3g10770.2 68416.m01297 expressed protein                             27   8.6  
At3g10770.1 68416.m01296 expressed protein                             27   8.6  

>At1g09450.1 68414.m01057 haspin-related similar to haspin
           (GI:9229937) {Mus musculus} and haploid germ
           cell-specific nuclear protein kinase (GI:13561418) {Mus
           musculus}
          Length = 599

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 17/38 (44%), Positives = 26/38 (68%)
 Frame = +2

Query: 533 VMKIVPIAGHTKVHGEDQKDYHEIISEIVIAMELSALR 646
           V KIVPI G  +V+GE QK   E++ E++++  L+ LR
Sbjct: 308 VCKIVPIDGDFRVNGEVQKRADELLEEVILSWTLNQLR 345


>At1g43670.1 68414.m05016 fructose-1,6-bisphosphatase, putative /
           D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative
           / FBPase, putative very strong similarity to SP|P46267
           Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11)
           (D-fructose-1,6- bisphosphate 1-phosphohydrolase)
           (FBPase) {Brassica napus}; contains Pfam profile
           PF00316: fructose-1,6-bisphosphatase
          Length = 341

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/44 (25%), Positives = 26/44 (59%)
 Frame = +2

Query: 524 RARVMKIVPIAGHTKVHGEDQKDYHEIISEIVIAMELSALRAPI 655
           +A + K++ +AG T + GE+QK    + +++ +   +S+ R  +
Sbjct: 53  KAGLAKLIGLAGETNIQGEEQKKLDVLSNDVFVNALVSSGRTSV 96


>At1g32560.1 68414.m04018 late embryogenesis abundant group 1
           domain-containing protein / LEA group 1
           domain-containing protein contains Pfam domain, PF03760:
           Late embryogenesis abundant (LEA) group 1
          Length = 134

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -1

Query: 316 ARVLITRQSYHHNRRSKTLCMQGKMHALGFGHF*RNKKPSKKTYYPVTDNGSH 158
           AR    ++  H  R++K       MH     H   +K  +K+++Y VTD+G H
Sbjct: 35  ARTKEEKEIAHQRRKAKEAEANMDMHMAKAAHA-EDKLMAKQSHYHVTDHGPH 86


>At1g20470.1 68414.m02551 auxin-responsive family protein similar to
           indole-3-acetic acid induced protein ARG7 (SP:P32295)
           [Vigna radiata]
          Length = 146

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 443 SRRTFEKLSQDWRRCVRGSISLRARDGRARVMKI 544
           SR     L + WR+C +G  ++  R+GR  V+ +
Sbjct: 9   SRLRLTDLMEKWRKCKKGHFAVYTREGRRFVLPL 42


>At3g26125.1 68416.m03258 cytochrome P450, putative
          Length = 541

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -1

Query: 667 FDIGYGSAQGAQFHSNHNFRDNLVIVLLVFSMDLGMTSN 551
           FDIGY         + HNF D +V+  +    D G  +N
Sbjct: 247 FDIGYEKGLREAVETVHNFIDKMVVERIAMLKDQGTLAN 285


>At3g28040.1 68416.m03500 leucine-rich repeat transmembrane protein
           kinase, putative contains Pfam profiles: PF00560 leucine
           rich repeat, PF00069 eukaryotic protein kinase domain
          Length = 1016

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 444 PDALLKNCHKIGEGVYGEVF 503
           P++LL    +IGEGV+G V+
Sbjct: 722 PESLLNKASRIGEGVFGTVY 741


>At3g10770.2 68416.m01297 expressed protein
          Length = 325

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 574 MDLGMTSNWNYFHYSSSAISSTQRNTSPYTPSP 476
           M  G  +N NY H  + A+S    N + YTP P
Sbjct: 266 MPRGHQANLNYGHPLNPALSPFTHNVASYTPWP 298


>At3g10770.1 68416.m01296 expressed protein
          Length = 333

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 574 MDLGMTSNWNYFHYSSSAISSTQRNTSPYTPSP 476
           M  G  +N NY H  + A+S    N + YTP P
Sbjct: 274 MPRGHQANLNYGHPLNPALSPFTHNVASYTPWP 306


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,095,809
Number of Sequences: 28952
Number of extensions: 286744
Number of successful extensions: 815
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)