BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00217X
(417 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-3186|AAF49132.2| 1319|Drosophila melanogaster CG8793-PA... 29 3.3
AE014134-1731|AAN10713.1| 146|Drosophila melanogaster CG31876-P... 28 5.7
AY122210-1|AAM52722.1| 662|Drosophila melanogaster LP06602p pro... 27 10.0
AE014297-1455|AAF54753.1| 662|Drosophila melanogaster CG10095-P... 27 10.0
AE014134-3583|AAF57254.2| 570|Drosophila melanogaster CG5929-PA... 27 10.0
>AE014296-3186|AAF49132.2| 1319|Drosophila melanogaster CG8793-PA
protein.
Length = 1319
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +3
Query: 303 VCQKQITAARHCILDLKCLRFCDTYXEMGK--IRVTSKQT 416
VC+ Q A R +L ++CL+ Y E+ K IR+T++++
Sbjct: 499 VCKLQQFATRATLLSMECLKTARLYSEVAKQLIRMTNEES 538
>AE014134-1731|AAN10713.1| 146|Drosophila melanogaster CG31876-PA
protein.
Length = 146
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 177 LQRIGNNGGEHCSFSPVVLREFNGRKIISKLTAAAMIAPTP 299
L+ + H F+ VV R+ G+K+I A ++AP P
Sbjct: 84 LRTVDYTSDAHNGFNAVVRRDPLGQKVIKAAPIAKLLAPAP 124
>AY122210-1|AAM52722.1| 662|Drosophila melanogaster LP06602p
protein.
Length = 662
Score = 27.1 bits (57), Expect = 10.0
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +3
Query: 60 KLL*LKDHGIFHCPNSQHRRRSRSLHGRVFDPNR---GTSARLQRIGNNGGEHCSFS 221
K + LKD G + C S + S +H R+ +P G S R + G+ C S
Sbjct: 261 KYVQLKDEGTYECQVSTEPKASAIVHLRIVEPKTELIGESTRHVKAGSQVKLRCIIS 317
>AE014297-1455|AAF54753.1| 662|Drosophila melanogaster CG10095-PA
protein.
Length = 662
Score = 27.1 bits (57), Expect = 10.0
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +3
Query: 60 KLL*LKDHGIFHCPNSQHRRRSRSLHGRVFDPNR---GTSARLQRIGNNGGEHCSFS 221
K + LKD G + C S + S +H R+ +P G S R + G+ C S
Sbjct: 261 KYVQLKDEGTYECQVSTEPKASAIVHLRIVEPKTELIGESTRHVKAGSQVKLRCIIS 317
>AE014134-3583|AAF57254.2| 570|Drosophila melanogaster CG5929-PA
protein.
Length = 570
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3
Query: 298 GVGAIMAAAVNFDIIFRPLNSRN 230
GVG++ AAA+N I R LNSR+
Sbjct: 498 GVGSLAAAALNNTINVRSLNSRD 520
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,946,667
Number of Sequences: 53049
Number of extensions: 422566
Number of successful extensions: 985
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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