Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00215X
(408 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes ... 189 2e-47
UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127; Euka... 188 3e-47
UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4; Eukary... 165 4e-40
UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5; Magnol... 159 2e-38
UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protei... 140 1e-32
UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of cy... 128 3e-29
UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative; n... 126 1e-28
UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia... 122 2e-27
UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1; Guilla... 120 1e-26
UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n... 119 2e-26
UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7; T... 110 9e-24
UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1; Enceph... 105 3e-22
UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1; O... 95 6e-19
UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum... 91 1e-17
UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45; root|... 88 6e-17
UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus ... 87 2e-16
UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1; Archae... 85 7e-16
UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1; Methan... 84 9e-16
UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum... 84 1e-15
UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4; Entamoeba|... 81 6e-15
UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5; Thermo... 78 8e-14
UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11; Eurya... 74 1e-12
UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum ... 74 1e-12
UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropy... 73 3e-12
UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1; Nanoar... 72 5e-12
UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4; Haloba... 71 7e-12
UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3; Sulfol... 67 1e-10
UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiel... 64 8e-10
UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 64 1e-09
UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6; Methan... 63 2e-09
UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 60 1e-08
UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured... 60 2e-08
UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;... 60 2e-08
UniRef50_A4RYI1 Cluster: Plastid ribosomal protein L13 large rib... 49 3e-05
UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32; Bacter... 49 3e-05
UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12; Bacter... 46 2e-04
UniRef50_Q9TLV3 Cluster: Putative uncharacterized protein rpl13;... 43 0.002
UniRef50_Q1AU63 Cluster: 50S ribosomal protein L13; n=3; Bacteri... 42 0.004
UniRef50_Q67JX6 Cluster: 50S ribosomal protein L13; n=59; Bacter... 41 0.008
UniRef50_Q6G3I6 Cluster: 50S ribosomal protein L13; n=33; Bacter... 40 0.015
UniRef50_Q7XYN9 Cluster: Ribosomal protein rpL13; n=1; Bigelowie... 40 0.025
UniRef50_Q2IA19 Cluster: Chloroplast 50S ribosomal protein L13; ... 39 0.034
UniRef50_UPI0000EBD60B Cluster: PREDICTED: similar to ribosomal ... 39 0.045
UniRef50_Q8DW98 Cluster: 50S ribosomal protein L13; n=42; Lactob... 39 0.045
UniRef50_Q85FU2 Cluster: 50S ribosomal protein L13; n=1; Cyanidi... 39 0.045
UniRef50_Q82UK0 Cluster: 50S ribosomal protein L13; n=30; Bacter... 38 0.059
UniRef50_A5Z5I7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.10
UniRef50_Q1IU84 Cluster: 50S ribosomal protein L13; n=17; Bacter... 37 0.14
UniRef50_Q9SYL9 Cluster: 50S ribosomal protein L13, chloroplast ... 37 0.14
UniRef50_O46915 Cluster: Chloroplast 50S ribosomal protein L13; ... 36 0.24
UniRef50_Q6KI61 Cluster: 50S ribosomal protein l13; n=1; Mycopla... 36 0.31
UniRef50_Q7WFC3 Cluster: 50S ribosomal protein L13; n=265; Bacte... 36 0.42
UniRef50_Q53K43 Cluster: Retrotransposon protein, putative, uncl... 34 0.96
UniRef50_O51314 Cluster: 50S ribosomal protein L13; n=3; Borreli... 34 0.96
UniRef50_UPI00015B47D5 Cluster: PREDICTED: similar to protease, ... 34 1.3
UniRef50_A2AX70 Cluster: Gustatory receptor candidate 8; n=1; Tr... 33 1.7
UniRef50_Q12487 Cluster: 54S ribosomal protein L23, mitochondria... 33 1.7
UniRef50_UPI0000E4735E Cluster: PREDICTED: similar to pats1; n=2... 32 3.9
UniRef50_Q8KTT2 Cluster: 50S ribosomal protein L13; n=1; Candida... 32 3.9
UniRef50_Q9RXY1 Cluster: 50S ribosomal protein L13; n=6; Bacteri... 32 3.9
UniRef50_Q7TFK1 Cluster: Rh139; n=2; Cercopithecine herpesvirus ... 31 6.8
UniRef50_Q6YR78 Cluster: 50S ribosomal protein L13; n=2; Candida... 31 6.8
UniRef50_Q6MQH5 Cluster: 50S ribosomal protein L13; n=2; Bacteri... 31 6.8
UniRef50_Q54I73 Cluster: Putative uncharacterized protein; n=1; ... 31 6.8
UniRef50_Q39JK0 Cluster: 50S ribosomal protein L13; n=129; Bacte... 31 6.8
UniRef50_UPI0000D9F467 Cluster: PREDICTED: trophinin; n=2; Catar... 31 8.9
>UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes
aegypti|Rep: 60S ribosomal protein L13a - Aedes aegypti
(Yellowfever mosquito)
Length = 236
Score = 189 bits (461), Expect = 2e-47
Identities = 82/119 (68%), Positives = 100/119 (84%)
Frame = +3
Query: 51 MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFL 230
M G S K I+IDGRGHLLGRLA+VIAK +L G KVVVV CE + +SG+FFRNK+K +++L
Sbjct: 1 MPGLSEKPILIDGRGHLLGRLASVIAKQILNGRKVVVVRCEDLQLSGHFFRNKIKFLAYL 60
Query: 231 RKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNRRR 407
RKRCNVNP RGPFHFRAPS++LWK VRGM+PHKT+RG NAL+RL+ YEG P P D ++R
Sbjct: 61 RKRCNVNPARGPFHFRAPSRMLWKAVRGMVPHKTKRGHNALKRLKVYEGIPSPFDRQKR 119
>UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127;
Eukaryota|Rep: 60S ribosomal protein L13A - Drosophila
melanogaster (Fruit fly)
Length = 205
Score = 188 bits (459), Expect = 3e-47
Identities = 81/119 (68%), Positives = 102/119 (85%)
Frame = +3
Query: 51 MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFL 230
MTG +N+ +VIDGRGHLLGRLA+V+AK LL+G KV VV CE++N+SG+F+RNK+K +++L
Sbjct: 1 MTGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYL 60
Query: 231 RKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNRRR 407
RKRCNVNP RGPFHFRAPS+I +K VRGMIPHKT+RG+ AL RLR ++G P P D RRR
Sbjct: 61 RKRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRR 119
>UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4;
Eukaryota|Rep: 60S ribosomal protein L13a - Cyanophora
paradoxa
Length = 200
Score = 165 bits (400), Expect = 4e-40
Identities = 73/113 (64%), Positives = 89/113 (78%)
Frame = +3
Query: 69 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNV 248
K +V+D RGHLLGRLAA +AK LL G +VV V E+INISG+ FRNKLK +FL+KR N
Sbjct: 4 KVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNT 63
Query: 249 NPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNRRR 407
NP RGPFHFR+P++ILW+T+RGMIPHKT RG AL RL+ +EG PPP D +R
Sbjct: 64 NPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKR 116
>UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5;
Magnoliophyta|Rep: 60S ribosomal protein L13a - Capsicum
annuum (Bell pepper)
Length = 220
Score = 159 bits (386), Expect = 2e-38
Identities = 71/122 (58%), Positives = 91/122 (74%)
Frame = +3
Query: 42 VVKMTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLM 221
+V +G S + IV+D R H+LGRL++++AK LL G +VVVV CE+I +SG R K+K +
Sbjct: 1 MVSGSGISARRIVVDARHHMLGRLSSILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 60
Query: 222 SFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNR 401
FLRKR N P+ GP HFRAPSKILW+T+RGMIPHKT+RG AL RL+ YEG PPP D
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
Query: 402 RR 407
+R
Sbjct: 121 KR 122
>UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protein;
n=16; Alveolata|Rep: Ribosomal protein L13 containing
protein - Tetrahymena thermophila SB210
Length = 270
Score = 140 bits (339), Expect = 1e-32
Identities = 64/114 (56%), Positives = 82/114 (71%)
Frame = +3
Query: 66 NKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCN 245
+K +VID +GHLLGRLA+ +AK LL G ++VVV E INISG+ FRN++K FL K N
Sbjct: 75 DKLVVIDAKGHLLGRLASYVAKELLSGQRIVVVRTEAINISGSLFRNRVKFSEFLNKWMN 134
Query: 246 VNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNRRR 407
NP RG HFRAPS+I W+ VRGM+PHKT +G AL RL+ +EG P P D ++
Sbjct: 135 HNPRRGVQHFRAPSRIFWRAVRGMLPHKTPKGAAALERLKIFEGIPTPYDRVKK 188
>UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit; n=2;
Ostreococcus|Rep: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit -
Ostreococcus lucimarinus CCE9901
Length = 199
Score = 128 bits (310), Expect = 3e-29
Identities = 57/114 (50%), Positives = 77/114 (67%)
Frame = +3
Query: 66 NKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCN 245
+K IVID +GHL GRLA++++K LL+G VVVV E I +SG R ++ + KR N
Sbjct: 2 DKVIVIDAKGHLFGRLASIVSKQLLQGQHVVVVRTEGICMSGGMVRRRMAHDRYKNKRMN 61
Query: 246 VNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNRRR 407
NP +GP+H+ +PS++ WKTVRGM+PHKT RG A R + YEG P P D +R
Sbjct: 62 TNPKKGPYHYTSPSRLFWKTVRGMLPHKTVRGAAAFERFKAYEGIPAPYDKVKR 115
>UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative;
n=10; Trypanosomatidae|Rep: 60S ribosomal protein L13a,
putative - Leishmania major
Length = 222
Score = 126 bits (305), Expect = 1e-28
Identities = 60/104 (57%), Positives = 74/104 (71%)
Frame = +3
Query: 75 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNVNP 254
IVID + H+LGR AAV+AK LL G K+ VV CEQ+NI+G RNK+K + +LRKR NP
Sbjct: 25 IVIDLKDHVLGRAAAVVAKQLLLGKKITVVRCEQLNIAGTEIRNKIKYLQYLRKRKLTNP 84
Query: 255 TRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPP 386
T+GPFH RAPS + +TVR M+P T+RG AL L YEG PP
Sbjct: 85 TKGPFHHRAPSDVFVRTVRSMLPRYTKRGMKALNSLVAYEGIPP 128
>UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_608_8346_8939 - Giardia lamblia ATCC
50803
Length = 197
Score = 122 bits (295), Expect = 2e-27
Identities = 57/104 (54%), Positives = 77/104 (74%)
Frame = +3
Query: 75 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNVNP 254
IVID +GH+LGRL+A++AK LL G++V +V CE+ ISG F K + + KR N N
Sbjct: 4 IVIDCKGHILGRLSAIVAKELLHGHEVALVRCEKAIISGAFRDVKAHYLKKMHKRTNFNH 63
Query: 255 TRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPP 386
RGPFHFRAP++I+ +T+RGMIP+KT RG +A+ RLR Y+G PP
Sbjct: 64 LRGPFHFRAPAEIVRRTIRGMIPYKTVRGSDAMSRLRVYDGIPP 107
>UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1;
Guillardia theta|Rep: 60s ribosomal protein L13A -
Guillardia theta (Cryptomonas phi)
Length = 194
Score = 120 bits (288), Expect = 1e-26
Identities = 51/105 (48%), Positives = 76/105 (72%)
Frame = +3
Query: 69 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNV 248
K V+D + HLLGR+A++ AK +L+G+K++++ E +I+G RN K S +K+ N
Sbjct: 2 KIHVLDAKNHLLGRMASICAKKILQGDKIIIIRSELTSITGKLGRNVNKYKSIFKKKTNT 61
Query: 249 NPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGP 383
NP RGPFHF++PSKIL++T++ MIPHKT RG AL+ L+ +EG P
Sbjct: 62 NPRRGPFHFKSPSKILYQTIKRMIPHKTMRGSKALKNLKIFEGLP 106
>UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB39CE UniRef100
entry - Canis familiaris
Length = 172
Score = 119 bits (287), Expect = 2e-26
Identities = 56/88 (63%), Positives = 70/88 (79%)
Frame = +3
Query: 69 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNV 248
+ +V+ GRGHLLG LAA +AK +L G KVVVV E INISGNF+RNKLK ++FL K+ N
Sbjct: 5 QVLVLSGRGHLLGCLAATVAKQVL-GCKVVVVHYEGINISGNFYRNKLKYLAFLCKQMNT 63
Query: 249 NPTRGPFHFRAPSKILWKTVRGMIPHKT 332
NP+RGP+ F+APS+I W T RGM+PHKT
Sbjct: 64 NPSRGPYRFQAPSRIFWWTARGMLPHKT 91
>UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein L13,
putative - Trichomonas vaginalis G3
Length = 200
Score = 110 bits (265), Expect = 9e-24
Identities = 55/103 (53%), Positives = 67/103 (65%)
Frame = +3
Query: 75 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNVNP 254
IVID +GH+ GRLAA +AK LL+G KVVVV CE+I ++G FL K N NP
Sbjct: 5 IVIDAKGHIQGRLAAAVAKQLLKGRKVVVVRCEEIELNGQHKFTVHTYERFLNKTTNSNP 64
Query: 255 TRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGP 383
GPFH RAP +I + VRGMIP+KT RG +A L+ YEG P
Sbjct: 65 RDGPFHQRAPHEIFARAVRGMIPYKTHRGADAFANLQCYEGIP 107
>UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13A
- Encephalitozoon cuniculi
Length = 198
Score = 105 bits (253), Expect = 3e-22
Identities = 54/111 (48%), Positives = 69/111 (62%)
Frame = +3
Query: 75 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNVNP 254
++ID G + G+LAA +AK+LLEG +V VV E+ G+ R K +L KRC VNP
Sbjct: 7 VIIDATGQVAGKLAAKVAKLLLEGVRVTVVCAEEAVFVGSLERAMDKFKQYLNKRCLVNP 66
Query: 255 TRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNRRR 407
RGPFHFR P L K +R MI +K RGK A+ RL TYEG P L+ + R
Sbjct: 67 RRGPFHFREPRMHLAKIIRRMISYKKPRGKAAMSRLATYEGIPRELEGQPR 117
>UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
ribosomal protein L13a - Oryza sativa subsp. japonica
(Rice)
Length = 172
Score = 94.7 bits (225), Expect = 6e-19
Identities = 53/122 (43%), Positives = 69/122 (56%)
Frame = +3
Query: 42 VVKMTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLM 221
+V +G +V+D R H+L RLA++IAK LL G +VV
Sbjct: 1 MVSGSGVCAPRVVVDARHHMLSRLASIIAKELLNGKRVV--------------------- 39
Query: 222 SFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNR 401
R N P+ GP HFR+P+KILW+TVRGMIPHKT+RG+ AL RL+ YE PP D
Sbjct: 40 -----RMNTKPSHGPIHFRSPAKILWRTVRGMIPHKTKRGEAALARLKAYEVVTPPYDRT 94
Query: 402 RR 407
+R
Sbjct: 95 KR 96
>UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L13 - Cenarchaeum
symbiosum
Length = 139
Score = 90.6 bits (215), Expect = 1e-17
Identities = 42/102 (41%), Positives = 62/102 (60%)
Frame = +3
Query: 78 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNVNPT 257
++D H+ GRLA+ +AK+LLEGN+V ++ CE++ ISG + FL+ ++P
Sbjct: 1 MVDATDHIAGRLASNVAKMLLEGNRVSIINCEKVMISGKRASIVREYRDFLKIASIIHPE 60
Query: 258 RGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGP 383
GP+H R P I+ + +RGM+P K GK A RLR Y G P
Sbjct: 61 HGPYHPRRPDTIMTRMIRGMLPRKKPSGKAAHSRLRAYIGSP 102
>UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45;
root|Rep: 50S ribosomal protein L13P - Pyrococcus
horikoshii
Length = 142
Score = 88.2 bits (209), Expect = 6e-17
Identities = 47/111 (42%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
Frame = +3
Query: 78 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGN--FFRNKLKLMSFLRKRCNVN 251
+I+ G +LGRLA+ +AK+LLEG +VV+V E+ I+GN +K K + LR N
Sbjct: 3 IINADGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTL--TN 60
Query: 252 PTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNRR 404
P RGPF+ + +I+ +T+RGM+P KT+RG+ A RRL+ Y G P +++
Sbjct: 61 PRRGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEFQDKQ 111
>UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L13
- Candidatus Nitrosopumilus maritimus SCM1
Length = 154
Score = 86.6 bits (205), Expect = 2e-16
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Frame = +3
Query: 63 SNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRC 242
+++ IV+D H+ GRL++ +AK+L +G++V +V CE+I SG + FL
Sbjct: 10 TDRPIVVDATNHIAGRLSSNVAKLLKQGHRVSIVNCEKIMYSGTRSNLIKEYREFLEINS 69
Query: 243 NVNPTRGPFHFRAPSKILWKTVRGMIPH-KTERGKNALRRLRTYEGGPPPL 392
+NP GP H+R P I+ K +R M+P+ + GK +++RLR Y G P L
Sbjct: 70 IINPKHGPVHYRRPDTIITKMIRQMLPYDRKPSGKESIKRLRAYIGSPKEL 120
>UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L13P -
Archaeoglobus fulgidus
Length = 156
Score = 84.6 bits (200), Expect = 7e-16
Identities = 45/108 (41%), Positives = 66/108 (61%)
Frame = +3
Query: 78 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNVNPT 257
VID GH+LGRL++ IAK LL G ++VVV E+ I+G+ + + + K +
Sbjct: 18 VIDASGHILGRLSSKIAKRLLNGERIVVVNAEKAVITGDKY---MVFERYKEKYDRGSKE 74
Query: 258 RGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNR 401
+GP+ R P +I +TVRGM+P K+ RG++A RRLR + G P L R
Sbjct: 75 KGPYFPRHPERIFKRTVRGMLPWKSSRGRDAYRRLRVFMGVPEELQGR 122
>UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1;
Methanopyrus kandleri|Rep: 50S ribosomal protein L13P -
Methanopyrus kandleri
Length = 159
Score = 84.2 bits (199), Expect = 9e-16
Identities = 44/102 (43%), Positives = 66/102 (64%)
Frame = +3
Query: 78 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNVNPT 257
VID +LGRLA+V+AK +L+G ++ V+ E+ I+G +N +K +L+K +P
Sbjct: 17 VIDAENAVLGRLASVVAKRILKGERIAVINTEKAIITGK--KNTIK-EEWLQKIQRGDPK 73
Query: 258 RGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGP 383
+GPF+ R P I + VRGM+P KT+RG+ A +RLR Y G P
Sbjct: 74 KGPFYPRRPDLIFRRVVRGMLPWKTKRGREAFKRLRAYIGTP 115
>UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L13 - Thermofilum
pendens (strain Hrk 5)
Length = 154
Score = 83.8 bits (198), Expect = 1e-15
Identities = 50/120 (41%), Positives = 75/120 (62%), Gaps = 2/120 (1%)
Frame = +3
Query: 51 MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLK-LMSF 227
M+G +AIVIDG GH+ GRLA+V+AK LL+G++VVVV E+I I+G R K L +
Sbjct: 1 MSG-KEEAIVIDGTGHIAGRLASVVAKRLLKGDRVVVVNAEKIVITGKPKRVVEKYLKRW 59
Query: 228 LRKRCNVNP-TRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNRR 404
+ + NP RGP + + P ++ + VRGM+P + G+++L+RL Y G P N +
Sbjct: 60 VEWKTYYNPELRGPKYPKTPDRLFKRMVRGMLPMEKTIGRDSLKRLTVYVGLPDEYRNAK 119
>UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4;
Entamoeba|Rep: Ribosomal protein L13A - Entamoeba dispar
Length = 87
Score = 81.4 bits (192), Expect = 6e-15
Identities = 37/80 (46%), Positives = 54/80 (67%)
Frame = +3
Query: 63 SNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRC 242
+NK VID GH+LGR+A+V+AK LL G K+V+V CE + + G ++ + RKR
Sbjct: 8 NNKVTVIDCHGHVLGRVASVVAKHLLLGQKIVLVRCEDLQVCGTLKMRLVQWELYQRKRV 67
Query: 243 NVNPTRGPFHFRAPSKILWK 302
N NPTRG FH R+P++++ K
Sbjct: 68 NTNPTRGAFHHRSPAEMVRK 87
>UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L13P -
Pyrobaculum aerophilum
Length = 187
Score = 77.8 bits (183), Expect = 8e-14
Identities = 47/118 (39%), Positives = 71/118 (60%), Gaps = 7/118 (5%)
Frame = +3
Query: 75 IVIDGRGHLLGRLAAVIAKVLLE--GNKVVVVPCEQINISGNFFRNKLKLMSFLRK---- 236
+++D GH+ GRLA IAK LLE ++VVV E++ I+G+ K+ + F RK
Sbjct: 19 VIVDAEGHVAGRLATYIAKALLERPNLRIVVVNAEKLVITGD---EKMVIEWFKRKISEW 75
Query: 237 RCNVNPTR-GPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNRRR 407
R + NP + GP R P ++ + VRGM+P K+E G++AL+RLR Y P + R+R
Sbjct: 76 RTHYNPEKAGPKVPRRPDRVFKRIVRGMLPKKSETGRSALKRLRVYMSIPIEIMQRKR 133
>UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L13P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 140
Score = 74.1 bits (174), Expect = 1e-12
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = +3
Query: 78 VIDGRGHLLGRLAAVIAKVLLEGN-KVVVVPCEQINISGNFFRNKLKLMSFLRKRCNVNP 254
VID +G +LGRLA+ +AK LL G+ KV ++ E+ ISG+ L + R
Sbjct: 3 VIDAKGLILGRLASSVAKQLLSGDEKVYIINAEKAIISGS---RAATLREYRETRDRGAT 59
Query: 255 TRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGP 383
GP+ + P +IL +T+RGM+P+K RG++A+ RL+ Y G P
Sbjct: 60 EFGPYFPKRPDRILKRTIRGMLPYKRARGRDAMSRLKVYVGVP 102
>UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein L13 -
Halorubrum lacusprofundi ATCC 49239
Length = 149
Score = 73.7 bits (173), Expect = 1e-12
Identities = 36/103 (34%), Positives = 60/103 (58%)
Frame = +3
Query: 75 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNVNP 254
+V+D R +LGR+++ +A+ +L+G V VV E+ I+GN + M R +
Sbjct: 10 VVVDARDCILGRVSSKVAQRVLDGETVAVVNAERAVITGN----EEATMETYHTRAELGS 65
Query: 255 TRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGP 383
GP++ + P +I + +RGM+P+KTE G+ AL +R Y G P
Sbjct: 66 DSGPYYPKRPDRIFKRAIRGMLPYKTEDGREALSNVRVYVGNP 108
>UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L13P - Aeropyrum
pernix
Length = 155
Score = 72.5 bits (170), Expect = 3e-12
Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = +3
Query: 51 MTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGN-FFRNKLKLMSF 227
+ G + IV+DG G ++GRLA+V+AK+LL G +V VV E+I +SG+ + +
Sbjct: 3 LAGGEAREIVVDGSGMIMGRLASVVAKLLLAGWRVNVVNAEKIVLSGDPRMVVESYRTTV 62
Query: 228 LRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNR 401
L + + + P R P ++ VRGM+P RG+ AL RLR Y G P L R
Sbjct: 63 LGVKSHFSHKWRPKRPRTPQRLFKHAVRGMLPKNKARGRRALARLRVYVGVPDELKGR 120
>UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L13P -
Nanoarchaeum equitans
Length = 162
Score = 71.7 bits (168), Expect = 5e-12
Identities = 38/109 (34%), Positives = 66/109 (60%)
Frame = +3
Query: 75 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNVNP 254
++ D G +LGRLA+++A+ L G +V +V E+ I+G+ N +K +L+K +
Sbjct: 7 LIYDAEGLVLGRLASIVARNLKRGYRVKIVNAEKAIITGD--PNMVK-KEWLQKVKRGDY 63
Query: 255 TRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNR 401
+GPF+ + P IL + +RGM+P KT RG+ L+ ++ Y G P L ++
Sbjct: 64 YKGPFYPKRPDNILKRVIRGMLPRKTARGRELLKNVKVYIGVPEELKDK 112
>UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4;
Halobacteriaceae|Rep: 50S ribosomal protein L13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 145
Score = 71.3 bits (167), Expect = 7e-12
Identities = 34/103 (33%), Positives = 60/103 (58%)
Frame = +3
Query: 75 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNVNP 254
+++D R ++GR+A+ +A+ L+G V VV E+ I+G + +++ KR ++
Sbjct: 10 VIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGR----EEQIVEKYEKRVDIGN 65
Query: 255 TRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGP 383
G F+ + P I +T+RGM+PHK +RG+ A +R Y G P
Sbjct: 66 DNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNP 108
>UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3;
Sulfolobaceae|Rep: 50S ribosomal protein L13P -
Sulfolobus solfataricus
Length = 149
Score = 66.9 bits (156), Expect = 1e-10
Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = +3
Query: 54 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLR 233
T + ++I+ G +LGR+A+ + ++L EG KV++V E+ ISG R L
Sbjct: 3 TQVQEQVVIINAEGQILGRMASNVVRLLKEGKKVIIVNGEKAVISGEKNRVIESYKLLLT 62
Query: 234 KRCNVNPTR-GPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNRR 404
+ NP R G R+P I+ +T+RGM+P K+ +G+ L+ ++ Y G P + R+
Sbjct: 63 VKTLFNPYRNGIRRPRSPINIVKRTIRGMLP-KSSKGRRMLKNVKIYVGVPKEFEGRQ 119
>UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L13A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 181
Score = 64.5 bits (150), Expect = 8e-10
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +3
Query: 69 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNV 248
K IVIDGR L+GRLA+ I +L +G + V+ C+ + SG + +++ +
Sbjct: 3 KTIVIDGRNQLIGRLASNIVILLKKGYTLKVIRCKDLVFSGRYEHVYNRILKKKNLKTRT 62
Query: 249 NPTRGPFHFRAPSKILWKTVRGMI 320
NP +GP+ F PS +L K V+GM+
Sbjct: 63 NPNKGPYFFSNPSSLLKKIVKGML 86
>UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L13P -
Picrophilus torridus
Length = 138
Score = 63.7 bits (148), Expect = 1e-09
Identities = 33/109 (30%), Positives = 57/109 (52%)
Frame = +3
Query: 75 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNVNP 254
I ID H+ GRL++ +AK LL G + +V ++ I+G R + + F R +
Sbjct: 2 IYIDASNHIYGRLSSYVAKKLLNGESITIVNASKVVITG---RKEFIIDKFNNLRNTGSI 58
Query: 255 TRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNR 401
+GP++ + +IL +++ M+P K G AL+R Y P L+N+
Sbjct: 59 RKGPYYPKTADRILKRSIGDMLPKKKTHGMEALKRCMVYANVPKSLENK 107
>UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6;
Methanococcales|Rep: 50S ribosomal protein L13P -
Methanococcus maripaludis
Length = 137
Score = 62.9 bits (146), Expect = 2e-09
Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Frame = +3
Query: 75 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNVNP 254
+V++ ++GRLA+ +AK+ L G ++ VV E+ ++GN K + ++ NP
Sbjct: 2 VVVNAENAVVGRLASYVAKLALSGEEITVVNAEKAIMTGNKEYIFQKYVQLRTRKSISNP 61
Query: 255 TR-GPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGP 383
+ GP + R P I+ + +RGM+P+K RG A ++++ G P
Sbjct: 62 KKMGPKYPRRPDDIVRRVIRGMLPYKKPRGVEAFKKIKIEVGVP 105
>UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4;
Thermoprotei|Rep: 50S ribosomal protein L13P -
Sulfolobus acidocaldarius
Length = 148
Score = 60.5 bits (140), Expect = 1e-08
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = +3
Query: 75 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNVNP 254
+++D +LGR++ IAK+L G KV VV E+ ISG R + NP
Sbjct: 8 VIVDATNQILGRMSTHIAKLLKSGKKVYVVNAEKAIISGPRSRVLEGYSLLFTVKTMQNP 67
Query: 255 TR-GPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNR 401
R G R P I+ +TVRGM+P K + GK R L+ Y G P L+ +
Sbjct: 68 YRQGIRRPRNPINIVKRTVRGMLP-KNKLGKQIYRNLKAYIGIPKELEGK 116
>UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L13P -
uncultured organism HF70_19B12
Length = 161
Score = 60.1 bits (139), Expect = 2e-08
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Frame = +3
Query: 75 IVIDGRGHLLGRLAAVIAKVLL----EGN--KVVVVPCEQINISGNFFRNKLKLMSFLRK 236
+V D +LGRLA+ IAK LL EG+ +V+++ E ++G ++++ L + RK
Sbjct: 7 LVFDAHDKVLGRLASHIAKTLLVTRREGDPKRVIIINAEMAIVTGP--KDRI-LADYDRK 63
Query: 237 RCNVNPTRGPFHFRAPSKILWKTVRGMIPH-KTERGKNALRRLRTYEGGPPPL 392
+P +GPF R P IL +TVRGM+P+ K G+ A++ LR G P L
Sbjct: 64 YKLNHPRKGPFFPRMPDMILKRTVRGMLPYQKKSSGRQAVKDLRVMIGTPTNL 116
>UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;
n=1; Pisum sativum|Rep: Putative senescence-associated
protein - Pisum sativum (Garden pea)
Length = 255
Score = 59.7 bits (138), Expect = 2e-08
Identities = 28/59 (47%), Positives = 38/59 (64%)
Frame = +3
Query: 99 LLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNVNPTRGPFHF 275
+LGRLA+++AK L + +V CE+I ISG R K+K M FLR+R N P+ GP F
Sbjct: 1 MLGRLASIVAKELSMVRRSFLVRCEEICISGGLGRQKMKYMRFLRRRMNTKPSHGPITF 59
>UniRef50_A4RYI1 Cluster: Plastid ribosomal protein L13 large
ribosomal subunit; n=2; Ostreococcus|Rep: Plastid
ribosomal protein L13 large ribosomal subunit -
Ostreococcus lucimarinus CCE9901
Length = 218
Score = 49.2 bits (112), Expect = 3e-05
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 14/119 (11%)
Frame = +3
Query: 75 IVIDGRGHLLGRLAAVIAKVLLEGN------------KVVVVPCEQINISGNFFRNKLKL 218
+VID G LGRL+ V A L GN VVV+ ++I ++GN KL
Sbjct: 75 VVIDAAGLRLGRLSTVAATYLRGGNSGCYTPAFNMGVNVVVINADKIVVTGNKANQKLYY 134
Query: 219 MSFLRKR--CNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPP 389
+R + T H R P++++ K ++GM+P K G+ L+ Y G P
Sbjct: 135 TLGVRGKPGSMKEETYASLHARQPARVIEKAIKGMLP-KNRMGRETFTHLKVYAGADHP 192
>UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32;
Bacteria|Rep: 50S ribosomal protein L13 -
Prochlorococcus marinus (strain MIT 9313)
Length = 150
Score = 49.2 bits (112), Expect = 3e-05
Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 12/121 (9%)
Frame = +3
Query: 78 VIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVPCEQINISGNFFRNKLKLM 221
++D LGRLA +A VL NK VVVV ++I +SGN KL
Sbjct: 18 LVDAENQTLGRLATEVASVLRGKNKPSFTPHLDTGDFVVVVNADKIRVSGNKANQKLYRR 77
Query: 222 SFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNR 401
R T R P +I+ K ++GM+PH G+ R+L+ Y G P +
Sbjct: 78 HSGRPGGMKVETFQALQDRLPERIVEKAIKGMLPHNA-LGRQLFRKLKVYRGPEHPHSAQ 136
Query: 402 R 404
R
Sbjct: 137 R 137
>UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12;
Bacteria|Rep: 50S ribosomal protein L13 - Synechococcus
sp. (strain CC9902)
Length = 150
Score = 46.4 bits (105), Expect = 2e-04
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Frame = +3
Query: 78 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVPCEQINISGNFFRNKLKLM 221
V+D LGRLA +A +L G+ VVVV E+I +SG + KL
Sbjct: 18 VVDAENQTLGRLATEVASILRGKNNPNFTPHLDTGDFVVVVNAEKIQVSGKKPQQKLYRR 77
Query: 222 SFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPP 389
R T R P +I+ K ++GM+PH G+ R+L+ Y+G P
Sbjct: 78 HSGRPGGMKVETFESLQERIPERIVEKAIKGMLPHNA-LGRQMYRKLKVYKGTEHP 132
>UniRef50_Q9TLV3 Cluster: Putative uncharacterized protein rpl13;
n=1; Cyanidium caldarium|Rep: Putative uncharacterized
protein rpl13 - Cyanidium caldarium
Length = 143
Score = 43.2 bits (97), Expect = 0.002
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +3
Query: 99 LLGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNVNPTRGPFHF- 275
L+G+ + + + N V+++ Q+ I+GN +N K+ + T +H
Sbjct: 37 LMGKNRSTYSYNSMSANFVIIINSRQVAITGN--KNTQKVYKRYSAKPGATKTESFYHLK 94
Query: 276 -RAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPP 389
R P++IL + V+GM+P K+ GK L+ Y G P
Sbjct: 95 KRIPNRILEQAVKGMLP-KSVLGKKMFSHLKVYAGDSHP 132
>UniRef50_Q1AU63 Cluster: 50S ribosomal protein L13; n=3;
Bacteria|Rep: 50S ribosomal protein L13 - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 143
Score = 42.3 bits (95), Expect = 0.004
Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 17/124 (13%)
Frame = +3
Query: 69 KAIVIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVPCEQINISGNFFRNKL 212
K VID G LGRLAA I+++L NK VVVV +++ ++G K+
Sbjct: 14 KWYVIDAEGKTLGRLAAEISRLLRGKNKPQYTPHVDVGDFVVVVNADKVEVTGRKAEQKV 73
Query: 213 KLMSF-----LRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEG 377
LR+R R + P +IL + VRGM+P KT + L++LR Y G
Sbjct: 74 YRWHTGYPGGLRERSYRQMLR-----KRPEEILRQAVRGMMP-KTRLARRQLKKLRIYAG 127
Query: 378 GPPP 389
P
Sbjct: 128 PEHP 131
>UniRef50_Q67JX6 Cluster: 50S ribosomal protein L13; n=59;
Bacteria|Rep: 50S ribosomal protein L13 -
Symbiobacterium thermophilum
Length = 143
Score = 41.1 bits (92), Expect = 0.008
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 12/119 (10%)
Frame = +3
Query: 69 KAIVIDGRGHLLGRLAAVIAKVLLE------------GNKVVVVPCEQINISGNFFRNKL 212
K V+D G LGRLA+ +A +L G+ V++V E+I ++G +K+
Sbjct: 15 KWYVVDAEGKTLGRLASKVAAILRGKHKPTFTPHVDCGDFVIIVNAEKIQVTGKKVTDKV 74
Query: 213 KLMSFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPP 389
T R P ++L ++GM+PH G+ R+L+ Y G P
Sbjct: 75 YYRHSGYPGGQKATTFEQMIARRPERVLELAIKGMLPH-NRLGRQMYRKLKVYAGPEHP 132
>UniRef50_Q6G3I6 Cluster: 50S ribosomal protein L13; n=33;
Bacteria|Rep: 50S ribosomal protein L13 - Bartonella
henselae (Rochalimaea henselae)
Length = 154
Score = 40.3 bits (90), Expect = 0.015
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Frame = +3
Query: 48 KMTGFSNKAIVIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVPCEQINISG 191
K T K ++ID +LGRLAA +A L +G+ V+V+ ++I+++G
Sbjct: 7 KPTEVVKKWVIIDAENLVLGRLAAFVANRLRGKHKATFTPHVDDGDNVIVINADKISLTG 66
Query: 192 NFFRNK-----LKLMSFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALR 356
+ +K + ++KR G F P +++ K V MIP + G+ L+
Sbjct: 67 KKYTDKKYYWHTGYIGGIKKRTARQILEGRF----PERVVEKAVERMIP-RGPLGRRQLK 121
Query: 357 RLRTYEGGPPP 389
LR Y G P
Sbjct: 122 NLRVYAGSQHP 132
>UniRef50_Q7XYN9 Cluster: Ribosomal protein rpL13; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpL13 - Bigelowiella
natans (Pedinomonas minutissima) (Chlorarachnion
sp.(strain CCMP 621))
Length = 273
Score = 39.5 bits (88), Expect = 0.025
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Frame = +3
Query: 75 IVIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVPCEQINISGNFFRNKL-K 215
IV+D + +LGRLA++ A +++ G VV++ +++ ++G + +KL K
Sbjct: 127 IVLDAQDQILGRLASLAATLVMGKWHPLYHPAMNMGAHVVIINADKVRVTGRKYTDKLYK 186
Query: 216 LMSFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPP 389
R + R P +I+ ++GM+P KT G+ ++L Y G P
Sbjct: 187 RHVTGRPGSMKSEAFRDLQARIPERIVEVAIKGMLP-KTRLGREQFKQLHIYAGDENP 243
>UniRef50_Q2IA19 Cluster: Chloroplast 50S ribosomal protein L13;
n=1; Pavlova lutheri|Rep: Chloroplast 50S ribosomal
protein L13 - Pavlova lutherii (Monochrysis lutheri)
Length = 225
Score = 39.1 bits (87), Expect = 0.034
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
Frame = +3
Query: 78 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVPCEQINISGNFFRNKLKLM 221
VID G LGR+A IAK L+ G+ V+V+ +++ ISG F K
Sbjct: 73 VIDAEGMRLGRMATEIAKRLMGKHKVTFFPGSNMGDYVIVINADKVVISGAKFYQKEYFR 132
Query: 222 SFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEG 377
R + R P +I+ K V+GM+P K G+ R L+ + G
Sbjct: 133 HSGRPGGVTVESFEQLQARIPERIVEKAVKGMLP-KGPLGREQFRHLKVFAG 183
>UniRef50_UPI0000EBD60B Cluster: PREDICTED: similar to ribosomal
protein L13a; n=2; Bos taurus|Rep: PREDICTED: similar to
ribosomal protein L13a - Bos taurus
Length = 112
Score = 38.7 bits (86), Expect = 0.045
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 219 MSFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYE 374
+ + + NP+ GPF F P I TV+ ++P+K + + L L+ ++
Sbjct: 6 LDLFHRPLDTNPSNGPFQFWVPKHIFRHTVQDLLPYKIKHDQETLEHLKVFD 57
>UniRef50_Q8DW98 Cluster: 50S ribosomal protein L13; n=42;
Lactobacillales|Rep: 50S ribosomal protein L13 -
Streptococcus mutans
Length = 148
Score = 38.7 bits (86), Expect = 0.045
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Frame = +3
Query: 69 KAIVIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVPCEQINISGNFFRNKL 212
K ++D LGRL+AV+A VL NK V+V+ E++ ++G NK+
Sbjct: 16 KWYIVDATDVPLGRLSAVVASVLRGKNKPTFTPHTDTGDFVIVINAEKVKLTGKKAANKI 75
Query: 213 KLMSFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEG 377
+ + G + +++ K+V+GM+PH T G+ +L+ + G
Sbjct: 76 YYTHSMYPGGLKQISAGELRSKNAVRLIEKSVKGMLPHNT-LGRAQGMKLKVFVG 129
>UniRef50_Q85FU2 Cluster: 50S ribosomal protein L13; n=1;
Cyanidioschyzon merolae|Rep: 50S ribosomal protein L13 -
Cyanidioschyzon merolae (Red alga)
Length = 98
Score = 38.7 bits (86), Expect = 0.045
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Frame = +3
Query: 75 IVIDGRGHLLGRLAAVIAKVLLEGNK--VVVVPCEQINISGNFFRNKLKLMSFLRKRCNV 248
++I+ + +LGRLA+ + K LL + + +V QI ++GN ++NK S+ R
Sbjct: 1 MLINAKDEILGRLASRVVKTLLTQSVTCIEIVQANQIQVTGNKYKNK----SYRRHSGRP 56
Query: 249 NPTRGPFHFRAPSK-ILWKTVRGMIPHKTERGKNALRRLR 365
+ + ++ K L ++GM+P K +G+ R++R
Sbjct: 57 GGMKIRYFYQIGGKRALEHAIKGMLP-KGVKGRQLWRKIR 95
>UniRef50_Q82UK0 Cluster: 50S ribosomal protein L13; n=30;
Bacteria|Rep: 50S ribosomal protein L13 - Nitrosomonas
europaea
Length = 144
Score = 38.3 bits (85), Expect = 0.059
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Frame = +3
Query: 78 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVPCEQINISGNFFRNKLKLM 221
V+D +LGRLAA IA L G+ +VV+ +++ ++GN +K
Sbjct: 17 VVDATDKVLGRLAAAIAHRLRGKHKPIYTPHVDTGDYIVVINADKLRVTGNKAEDKKYYR 76
Query: 222 SFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPP 389
T H R P++ L K V+GM+P K G +++L+ Y G P
Sbjct: 77 HSGYPGGIYETTFKKMHERFPTRPLEKAVKGMLP-KGPLGYAMIKKLKIYAGDTHP 131
>UniRef50_A5Z5I7 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 106
Score = 37.5 bits (83), Expect = 0.10
Identities = 24/75 (32%), Positives = 36/75 (48%)
Frame = -3
Query: 358 LLRAFLPRSVLCGIIPLTVFHRILDGALKWKGPRVGFTLHLLRRNDISLSLFLKKLPEML 179
+LR F R+ L FHR L+W+ R G + + + +S S F+KK+P
Sbjct: 1 MLRYFSQRNSLAACSSSGCFHR-----LEWRACRSGESPYKFQSLSVSRSKFIKKVPSGR 55
Query: 178 ICSQGTTTTLFPSRR 134
+ SQ T+ P RR
Sbjct: 56 VISQSTSAFWLPFRR 70
>UniRef50_Q1IU84 Cluster: 50S ribosomal protein L13; n=17;
Bacteria|Rep: 50S ribosomal protein L13 - Acidobacteria
bacterium (strain Ellin345)
Length = 142
Score = 37.1 bits (82), Expect = 0.14
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 13/122 (10%)
Frame = +3
Query: 63 SNKAIVIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVPCEQINISGNFFRN 206
+ K V+D G LGRLA+ +A++L G+ VVV+ E+I I+G N
Sbjct: 11 ARKWFVVDADGQTLGRLASRVARILSGKDNPKYTPFIDTGDHVVVINAEKIKITGLKADN 70
Query: 207 KLKLMSFLRKRCNVNPTRGPFHF-RAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGP 383
K K + + R P IL ++GM+P K++ GK +L+ Y G
Sbjct: 71 K-KYYHYSGYPGGMKEEEFLKRLERRPELILETAIKGMLP-KSKLGKAMGGKLKVYRGAD 128
Query: 384 PP 389
P
Sbjct: 129 HP 130
>UniRef50_Q9SYL9 Cluster: 50S ribosomal protein L13, chloroplast
precursor; n=47; cellular organisms|Rep: 50S ribosomal
protein L13, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 241
Score = 37.1 bits (82), Expect = 0.14
Identities = 36/116 (31%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Frame = +3
Query: 78 VIDGRGHLLGRLAAVIA-----KVLLE-------GNKVVVVPCEQINISGNFFRNKLKLM 221
V+D +LGRLA+ IA K L G V+VV E++ +SG KL
Sbjct: 107 VVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRR 166
Query: 222 SFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPP 389
R T R P +I+ VRGM+P K G+ L+ Y+G P
Sbjct: 167 HSGRPGGMTVETFDQLQQRIPERIVEHAVRGMLP-KGRLGRALFNHLKVYKGPDHP 221
>UniRef50_O46915 Cluster: Chloroplast 50S ribosomal protein L13;
n=4; Eukaryota|Rep: Chloroplast 50S ribosomal protein
L13 - Guillardia theta (Cryptomonas phi)
Length = 143
Score = 36.3 bits (80), Expect = 0.24
Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 12/119 (10%)
Frame = +3
Query: 69 KAIVIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVPCEQINISGNFFRNKL 212
K +ID LGRLA+ AK L+ N +V++ ++I ++GN +K
Sbjct: 15 KWFIIDATDKNLGRLASETAKTLVGKYDPLYAPNVNPKNIIVIINADKIRVTGNKKFDKF 74
Query: 213 KLMSFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPP 389
+ T R P +IL K V+G++P K G+ L+ Y G P
Sbjct: 75 YYRHSGQVGGLTIETFNELQSRLPGRILEKAVKGILP-KGPLGRELFNNLKVYAGSSHP 132
>UniRef50_Q6KI61 Cluster: 50S ribosomal protein l13; n=1; Mycoplasma
mobile|Rep: 50S ribosomal protein l13 - Mycoplasma
mobile
Length = 144
Score = 35.9 bits (79), Expect = 0.31
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 12/124 (9%)
Frame = +3
Query: 42 VVKMTGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVPCEQINI 185
+++ K V+D G +LGRLA+V+A L NK ++V+ +++ +
Sbjct: 6 IIRHKETDKKWFVVDAEGQVLGRLASVVASYLRGKNKPTFTPNVDMGDNIIVINADKVVL 65
Query: 186 SGNFFRNKLKLMSFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLR 365
+ +K+ S + P ++ K V+GMIPH T+ G+ L
Sbjct: 66 TAKKEDDKIYYSSSGYNGGLKAINARDLRAKKPFALVEKAVKGMIPH-TKLGRKQFGNLY 124
Query: 366 TYEG 377
Y G
Sbjct: 125 VYAG 128
>UniRef50_Q7WFC3 Cluster: 50S ribosomal protein L13; n=265;
Bacteria|Rep: 50S ribosomal protein L13 - Bordetella
bronchiseptica (Alcaligenes bronchisepticus)
Length = 142
Score = 35.5 bits (78), Expect = 0.42
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Frame = +3
Query: 78 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVPCEQINISGNFFRNKLKLM 221
VID +G +LGR+A+ +A L G+ +V++ I ++GN ++K K
Sbjct: 17 VIDAKGKVLGRVASEVAHRLRGKHKPEFTPHVDTGDYIVIINAADIVVTGNKAQDK-KYF 75
Query: 222 SFLRKRCNVNPTR-GPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPP 389
+ T R P + + K V+GM+P K G +++L+ Y G P
Sbjct: 76 RHTTYPGGIRETNFEKMQQRFPGRAIQKAVKGMLP-KGPLGYAMIKKLKVYAGAEHP 131
>UniRef50_Q53K43 Cluster: Retrotransposon protein, putative,
unclassified; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 512
Score = 34.3 bits (75), Expect = 0.96
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 336 RGKNALRRLRTYEGGPPPLDNRRR 407
RG+ AL RL+ YEG PPP D +R
Sbjct: 9 RGEAALARLKAYEGVPPPYDRTKR 32
>UniRef50_O51314 Cluster: 50S ribosomal protein L13; n=3; Borrelia
burgdorferi group|Rep: 50S ribosomal protein L13 -
Borrelia burgdorferi (Lyme disease spirochete)
Length = 146
Score = 34.3 bits (75), Expect = 0.96
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Frame = +3
Query: 45 VKMTGFSNKAIVIDGRGHLLGRLAAVIAKVLLE------------GNKVVVVPCEQINIS 188
+K K VID +LG++A + K+L G+ V+++ ++ ++
Sbjct: 12 IKPKTVEKKWYVIDAADRILGKVAVDVVKILRGKHKAYYTPHQDLGDNVIIINASKVKLT 71
Query: 189 GNFFRNKLKLMSFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRT 368
G ++ KL + T R P L ++GM+P K G+N R L+
Sbjct: 72 GKKYQQKLYYRHSRYPGGLYSDTFRTLSERKPCAPLEIAIKGMLP-KGPLGRNLFRNLKV 130
Query: 369 YEG 377
+ G
Sbjct: 131 FSG 133
>UniRef50_UPI00015B47D5 Cluster: PREDICTED: similar to protease,
reverse transcriptase, ribonuclease H, integrase; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to protease,
reverse transcriptase, ribonuclease H, integrase -
Nasonia vitripennis
Length = 1567
Score = 33.9 bits (74), Expect = 1.3
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 132 VLLEGNKVVVVPCEQINISGNFFRNKLKLMSF---LRKRCNVNPTRGPFHFRAPSKILWK 302
VLL V+PC+ + +F+ LK+ S L+ N +P R P HF K W
Sbjct: 1072 VLLNSVMAKVIPCDDLEPVPSFYITPLKVRSIMHELKDNANPDPDRIPAHF---VKCCWS 1128
Query: 303 TVRGMI 320
++G I
Sbjct: 1129 ALKGPI 1134
>UniRef50_A2AX70 Cluster: Gustatory receptor candidate 8; n=1;
Tribolium castaneum|Rep: Gustatory receptor candidate 8
- Tribolium castaneum (Red flour beetle)
Length = 379
Score = 33.5 bits (73), Expect = 1.7
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 192 NFFRNKLKLMSFLRKRCNVNPTRGPFHFRAP--SKILWKTVRGMI 320
N+ + ++ +SF K CN+ P+ F P K LWK ++G++
Sbjct: 5 NYSKKDIRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWKKIQGVV 49
>UniRef50_Q12487 Cluster: 54S ribosomal protein L23, mitochondrial
precursor; n=12; Saccharomycetales|Rep: 54S ribosomal
protein L23, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 163
Score = 33.5 bits (73), Expect = 1.7
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 144 GNKVVVVPCEQINISGNFFRNKLKLMSFLRK-RCNVNPTRGPFHFRAPSKILWKTVRGMI 320
G+ VVV C++I ++G F K R + + + +IL K V GM+
Sbjct: 54 GDYVVVTNCQKIRVTGKKFEQKTYWSHSGRPGQLKLQTMNKVVADKGFGEILKKAVSGML 113
Query: 321 PHKTERGKNALRRLRTYEGGPPP 389
P K + K L RL+ ++G P
Sbjct: 114 P-KNKLRKQRLDRLKVFDGSENP 135
>UniRef50_UPI0000E4735E Cluster: PREDICTED: similar to pats1; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
pats1 - Strongylocentrotus purpuratus
Length = 1204
Score = 32.3 bits (70), Expect = 3.9
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 322 GIIPLTVFHRILDGALKWKGPRVGFTLHLLRRNDISLSLFLK--KLPEMLICSQGT 161
G +P +FHR++ A++W G R G + L R ISL + + L EML C + T
Sbjct: 940 GFLPDGLFHRLMTRAVRWMGERDGEPVILFYR-QISLMVDEEHHALLEMLPCHEAT 994
>UniRef50_Q8KTT2 Cluster: 50S ribosomal protein L13; n=1; Candidatus
Tremblaya princeps|Rep: 50S ribosomal protein L13 -
Tremblaya princeps
Length = 124
Score = 32.3 bits (70), Expect = 3.9
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 12/101 (11%)
Frame = +3
Query: 78 VIDGRGHLLGRLAAVIAKVL------------LEGNKVVVVPCEQINISGNFFRNKLKLM 221
V+D RG +LGRLA +A +L N V V+ CE + ISG+ K+
Sbjct: 8 VLDARGMVLGRLAVTVAGLLRGKYKASYAHNAAPHNAVTVLNCEHVRISGSKAVGKVYYR 67
Query: 222 SFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGK 344
R+P+ +L V GM+P R +
Sbjct: 68 HSGHPGGLRRTKLHDLMLRSPATVLRAAVHGMLPRNRLRDR 108
>UniRef50_Q9RXY1 Cluster: 50S ribosomal protein L13; n=6;
Bacteria|Rep: 50S ribosomal protein L13 - Deinococcus
radiodurans
Length = 174
Score = 32.3 bits (70), Expect = 3.9
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Frame = +3
Query: 75 IVIDGRGHLLGRLAAVIAK------------VLLEGNKVVVVPCEQINISGNFFRNKLKL 218
+V+D G LGRLA +IA +++G+ VVV+ Q+ ++G +K+
Sbjct: 42 VVVDASGVPLGRLATLIASRIRGKHRPDFTPNMIQGDFVVVINAAQVALTGKKLDDKVYT 101
Query: 219 MSFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPP 389
+ T + P +++ V GM+P K +G+ RL+ Y G P
Sbjct: 102 RYTGYQGGLKTETAREALSKHPERVIEHAVFGMLP-KGRQGRAMHTRLKVYAGETHP 157
>UniRef50_Q7TFK1 Cluster: Rh139; n=2; Cercopithecine herpesvirus
8|Rep: Rh139 - Rhesus cytomegalovirus (strain 68-1)
(RhCMV)
Length = 724
Score = 31.5 bits (68), Expect = 6.8
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +3
Query: 42 VVKMTGFSNKAIVIDG--RGHLLGRLAAVIAKVLLEGNKVVVV 164
VV G++N A DG R L R ++V+A+VLLEG+ ++ V
Sbjct: 60 VVHRGGYANLAATADGEERQQSLDRRSSVLARVLLEGSALIRV 102
>UniRef50_Q6YR78 Cluster: 50S ribosomal protein L13; n=2; Candidatus
Phytoplasma asteris|Rep: 50S ribosomal protein L13 -
Onion yellows phytoplasma
Length = 152
Score = 31.5 bits (68), Expect = 6.8
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 12/110 (10%)
Frame = +3
Query: 78 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVPCEQINISGNFFRNKLKLM 221
++D +G LGRLA +A +L G+ V+VV I+++G ++ K
Sbjct: 27 LVDAKGKTLGRLATKVASILKGKHKTHYTPHVDNGDYVIVVNAAYIHLTGKKWQQKTYYK 86
Query: 222 SFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTY 371
+ P++++ K + GM+PH T+ G ++L Y
Sbjct: 87 HSGYPGGLTKVVASEMMRKFPTRMVEKAILGMVPH-TKLGSQIGKKLFVY 135
>UniRef50_Q6MQH5 Cluster: 50S ribosomal protein L13; n=2;
Bacteria|Rep: 50S ribosomal protein L13 - Bdellovibrio
bacteriovorus
Length = 146
Score = 31.5 bits (68), Expect = 6.8
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Frame = +3
Query: 78 VIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVPCEQINISGNFFRNKLKLM 221
++D G +GR+A +A +L NK VVV+ +++ +SG +++K K
Sbjct: 17 IVDAAGQKVGRVATHVATILRGKNKAIYTPNVDTGDFVVVINTDKMELSGTKWQDK-KYY 75
Query: 222 SFLRKRCNVNP-TRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPP 389
S R ++ T + + I+ + VRGM+P + ++ + +++ Y G P
Sbjct: 76 SHTRFFGSLKEMTAAQAKEKDSTFIIHEAVRGMLP-TNKLSRHVIMKMKAYTGAEHP 131
>UniRef50_Q54I73 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1471
Score = 31.5 bits (68), Expect = 6.8
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +3
Query: 102 LGRLAAVIAKVLLEGNKVVVVPCEQINISGNFFRNKLKLMSFLRKRCNVN 251
L LA +I VL+E N E I +S F N+ K +S RKR N N
Sbjct: 991 LDSLALIIGSVLIEANTCERSEFE-IKVSSKAFENQFKYISEQRKRINDN 1039
>UniRef50_Q39JK0 Cluster: 50S ribosomal protein L13; n=129;
Bacteria|Rep: 50S ribosomal protein L13 - Burkholderia
sp. (strain 383) (Burkholderia cepacia (strain ATCC
17760/ NCIB 9086 / R18194))
Length = 142
Score = 31.5 bits (68), Expect = 6.8
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 12/116 (10%)
Frame = +3
Query: 78 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVPCEQINISGNFFRNKLKLM 221
VID +LGR+A+ +A+ L G+ ++++ ++ ++GN +K
Sbjct: 17 VIDATDKVLGRVASEVARRLRGKHKPEFTPHVDTGDFIIIINASKLKVTGNKTLDKKYYR 76
Query: 222 SFLRKRCNVNPTRGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPP 389
T G R P + L K V+GM+P K G +++L+ Y P
Sbjct: 77 HSGYPGGIYETTFGKMQERFPGRALEKAVKGMLP-KGPLGYAMIKKLKVYAEATHP 131
>UniRef50_UPI0000D9F467 Cluster: PREDICTED: trophinin; n=2;
Catarrhini|Rep: PREDICTED: trophinin - Macaca mulatta
Length = 1648
Score = 31.1 bits (67), Expect = 8.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 285 SKILWKTVRGMIPHKTERGKNALRRLRTYEGGPPPLDNRR 404
+++ WK V G IP + ++GK R ++GG P D R+
Sbjct: 154 TQVAWKKVGGRIPFEPQKGK-IWTRFGPWKGGIPSWDRRK 192
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,452,863
Number of Sequences: 1657284
Number of extensions: 7832724
Number of successful extensions: 20046
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 19666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20012
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18196175969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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