Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00214X
         (331 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064844-1|AAH64844.1|  664|Homo sapiens DCST1 protein protein.        29   2.6  
AL451085-34|CAI13272.1|  706|Homo sapiens DC-STAMP domain contai...    29   2.6  
AL451085-33|CAI13271.1|  664|Homo sapiens DC-STAMP domain contai...    29   2.6  
AK057347-1|BAB71440.1|  706|Homo sapiens protein ( Homo sapiens ...    29   2.6  
AF308819-1|AAL55819.1|  450|Homo sapiens nuclear receptor-intera...    29   3.5  
AF209198-1|AAF85941.1|  438|Homo sapiens zinc finger protein 277...    29   3.5  
AC004112-1|AAS07407.1|  419|Homo sapiens unknown protein.              29   3.5  
AL050348-13|CAC36109.2|  161|Homo sapiens ubiquitin-conjugating ...    29   4.6  
BT009807-1|AAP88809.1|  568|Homo sapiens numb homolog (Drosophil...    28   8.0  
AF015041-1|AAD01549.1|  609|Homo sapiens NUMB-R protein protein.       28   8.0  

>BC064844-1|AAH64844.1|  664|Homo sapiens DCST1 protein protein.
          Length = 664

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 268 HIRCATSLTLPNLVGMNGRL 209
           HIRCA+ L +P ++G  GRL
Sbjct: 99  HIRCASLLLVPKMLGKEGRL 118


>AL451085-34|CAI13272.1|  706|Homo sapiens DC-STAMP domain
           containing 1 protein.
          Length = 706

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 268 HIRCATSLTLPNLVGMNGRL 209
           HIRCA+ L +P ++G  GRL
Sbjct: 99  HIRCASLLLVPKMLGKEGRL 118


>AL451085-33|CAI13271.1|  664|Homo sapiens DC-STAMP domain
           containing 1 protein.
          Length = 664

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 268 HIRCATSLTLPNLVGMNGRL 209
           HIRCA+ L +P ++G  GRL
Sbjct: 99  HIRCASLLLVPKMLGKEGRL 118


>AK057347-1|BAB71440.1|  706|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32785 fis, clone TESTI2002251. ).
          Length = 706

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 268 HIRCATSLTLPNLVGMNGRL 209
           HIRCA+ L +P ++G  GRL
Sbjct: 99  HIRCASLLLVPKMLGKEGRL 118


>AF308819-1|AAL55819.1|  450|Homo sapiens nuclear
           receptor-interacting factor protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -2

Query: 135 ESKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVFRRTLVYGCR 4
           E  Y H   A+E  L++  +   L+ YQ  ++V F R  V+ CR
Sbjct: 315 EKLYVHMEDAHEFDLLKIKSELGLNFYQQVKLVNFIRRQVHQCR 358


>AF209198-1|AAF85941.1|  438|Homo sapiens zinc finger protein 277
           protein.
          Length = 438

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -2

Query: 135 ESKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVFRRTLVYGCR 4
           E  Y H   A+E  L++  +   L+ YQ  ++V F R  V+ CR
Sbjct: 303 EKLYVHMEDAHEFDLLKIKSELGLNFYQQVKLVNFIRRQVHQCR 346


>AC004112-1|AAS07407.1|  419|Homo sapiens unknown protein.
          Length = 419

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -2

Query: 135 ESKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVFRRTLVYGCR 4
           E  Y H   A+E  L++  +   L+ YQ  ++V F R  V+ CR
Sbjct: 284 EKLYVHMEDAHEFDLLKIKSELGLNFYQQVKLVNFIRRQVHQCR 327


>AL050348-13|CAC36109.2|  161|Homo sapiens ubiquitin-conjugating
           enzyme E2C protein.
          Length = 161

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 21/57 (36%), Positives = 28/57 (49%)
 Frame = -2

Query: 327 HSGGGTPSRTLARTSSPGALISGARLL*RSPISLE*TVDWRSRLLSIQSLKLYKQKP 157
           H   GT   ++ RTSS   L+SG R    S   L   + W  RLL   +L+L+ Q P
Sbjct: 67  HGAAGTAVGSI-RTSSTVCLLSGPRETQDSSKPLVWGLGWDMRLLLELTLQLFLQMP 122


>BT009807-1|AAP88809.1|  568|Homo sapiens numb homolog
           (Drosophila)-like protein.
          Length = 568

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 311 PHRGPSLGPAHPGLSYP 261
           PH  P   PA+PGL YP
Sbjct: 443 PHMQPPFVPAYPGLGYP 459


>AF015041-1|AAD01549.1|  609|Homo sapiens NUMB-R protein protein.
          Length = 609

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 311 PHRGPSLGPAHPGLSYP 261
           PH  P   PA+PGL YP
Sbjct: 484 PHMQPPFVPAYPGLGYP 500


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,514,419
Number of Sequences: 237096
Number of extensions: 1098338
Number of successful extensions: 2665
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2665
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)