Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00214X
(331 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068708-11|AAC17757.1| 136|Caenorhabditis elegans Hypothetical... 31 0.26
U80445-7|AAB37798.1| 368|Caenorhabditis elegans Hypothetical pr... 29 0.79
U80437-6|AAB37621.1| 368|Caenorhabditis elegans Hypothetical pr... 29 0.79
Z81031-4|CAF31468.2| 421|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z81031-3|CAF31467.1| 455|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z81031-2|CAF31464.1| 429|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z81031-1|CAB02718.4| 432|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z74027-4|CAA98423.1| 561|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z74027-3|CAA98422.1| 557|Caenorhabditis elegans Hypothetical pr... 27 3.2
AF539814-1|AAN16459.1| 421|Caenorhabditis elegans tyramine rece... 27 3.2
AF539813-1|AAN16458.1| 444|Caenorhabditis elegans tyramine rece... 27 3.2
AC098856-6|AAR12981.1| 93|Caenorhabditis elegans Hypothetical ... 26 7.3
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 25 9.7
AF022970-7|AAB69900.2| 322|Caenorhabditis elegans Hypothetical ... 25 9.7
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 25 9.7
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 25 9.7
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 25 9.7
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 25 9.7
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 25 9.7
>AF068708-11|AAC17757.1| 136|Caenorhabditis elegans Hypothetical
protein C18G1.1 protein.
Length = 136
Score = 30.7 bits (66), Expect = 0.26
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -2
Query: 195 LSIQSLKLYKQKPFRLTFPTESKYRHHRTAYEIVL 91
+S+ LK Y +KP R TE++ +H+RT + I+L
Sbjct: 45 ISLFPLKDYSRKPGRGPQRTEAEMKHYRTVFYIIL 79
>U80445-7|AAB37798.1| 368|Caenorhabditis elegans Hypothetical
protein C50F2.5 protein.
Length = 368
Score = 29.1 bits (62), Expect = 0.79
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -2
Query: 132 SKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVF 31
+KY T E+V+ +N++ SNY++ R++VF
Sbjct: 189 TKYELELTDSEVVIDKNSDDPNASNYKSHRLIVF 222
>U80437-6|AAB37621.1| 368|Caenorhabditis elegans Hypothetical
protein C43E11.5 protein.
Length = 368
Score = 29.1 bits (62), Expect = 0.79
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -2
Query: 132 SKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVF 31
+KY T E+V+ +N++ SNY++ R++VF
Sbjct: 189 TKYELELTDSEVVIDKNSDDPNASNYKSHRLIVF 222
>Z81031-4|CAF31468.2| 421|Caenorhabditis elegans Hypothetical
protein C02D4.2f protein.
Length = 421
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 162 FVCIVLVTVWIKADCASLP 218
FVCIV+V VWI + S+P
Sbjct: 163 FVCIVIVIVWILSMLISVP 181
>Z81031-3|CAF31467.1| 455|Caenorhabditis elegans Hypothetical
protein C02D4.2e protein.
Length = 455
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 162 FVCIVLVTVWIKADCASLP 218
FVCIV+V VWI + S+P
Sbjct: 174 FVCIVIVIVWILSMLISVP 192
>Z81031-2|CAF31464.1| 429|Caenorhabditis elegans Hypothetical
protein C02D4.2b protein.
Length = 429
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 162 FVCIVLVTVWIKADCASLP 218
FVCIV+V VWI + S+P
Sbjct: 171 FVCIVIVIVWILSMLISVP 189
>Z81031-1|CAB02718.4| 432|Caenorhabditis elegans Hypothetical
protein C02D4.2a protein.
Length = 432
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 162 FVCIVLVTVWIKADCASLP 218
FVCIV+V VWI + S+P
Sbjct: 174 FVCIVIVIVWILSMLISVP 192
>Z74027-4|CAA98423.1| 561|Caenorhabditis elegans Hypothetical
protein C13G3.3b protein.
Length = 561
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -3
Query: 308 HRGPSLGPAHPGLSYPVRDFFDAPQSRWNER*TGAVGFYPYSH 180
H+ SL HP L+Y V F + S +G + F+P H
Sbjct: 280 HKVKSLSVYHPQLAYCVVQFIEKDSSLTEPVISGMLRFWPKQH 322
>Z74027-3|CAA98422.1| 557|Caenorhabditis elegans Hypothetical
protein C13G3.3a protein.
Length = 557
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -3
Query: 308 HRGPSLGPAHPGLSYPVRDFFDAPQSRWNER*TGAVGFYPYSH 180
H+ SL HP L+Y V F + S +G + F+P H
Sbjct: 276 HKVKSLSVYHPQLAYCVVQFIEKDSSLTEPVISGMLRFWPKQH 318
>AF539814-1|AAN16459.1| 421|Caenorhabditis elegans tyramine
receptor short isoformSER-2a protein.
Length = 421
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 162 FVCIVLVTVWIKADCASLP 218
FVCIV+V VWI + S+P
Sbjct: 163 FVCIVIVIVWILSMLISVP 181
>AF539813-1|AAN16458.1| 444|Caenorhabditis elegans tyramine
receptor long isoformSER-2 protein.
Length = 444
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 162 FVCIVLVTVWIKADCASLP 218
FVCIV+V VWI + S+P
Sbjct: 163 FVCIVIVIVWILSMLISVP 181
>AC098856-6|AAR12981.1| 93|Caenorhabditis elegans Hypothetical
protein Y37F4.7 protein.
Length = 93
Score = 25.8 bits (54), Expect = 7.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 218 VHSNEIGERQRSRAPDMRAPGELVLARVRDGVPPPL 325
VH N I + AP MR+P E + RD P P+
Sbjct: 24 VHVNPISQLSPESAPRMRSPTETHIEMPRD-TPSPV 58
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 25.4 bits (53), Expect = 9.7
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Frame = +2
Query: 71 ATFVFRIKTISYAVRWCLYLDSVGNVKRKGFCLYSFSDCMDKSRLRQST----VHSNEIG 238
ATF ++K V+W + N K K S+S + ++L + V SN+ G
Sbjct: 4417 ATFNVKVKGPVKQVKWYKNGKEIPNAKAKDNGDGSYSLEIPNAQLDDTADYKVVVSNDAG 4476
Query: 239 ERQRSRAPDMRAPGELVLARVRDGVPP 319
+ S A ++ PG ++ + D P
Sbjct: 4477 DADSSAALTVKLPGIAIVKGLEDAEVP 4503
>AF022970-7|AAB69900.2| 322|Caenorhabditis elegans Hypothetical
protein F13A2.6 protein.
Length = 322
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 283 LTRGSHIRCATSLTLPNLVGMNGRLAQS 200
+TRG++ C ++ P+ MNG AQS
Sbjct: 159 VTRGNYSVCLSTRAFPDPYCMNGNAAQS 186
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 25.4 bits (53), Expect = 9.7
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Frame = +2
Query: 71 ATFVFRIKTISYAVRWCLYLDSVGNVKRKGFCLYSFSDCMDKSRLRQST----VHSNEIG 238
ATF ++K V+W + N K K S+S + ++L + V SN+ G
Sbjct: 3777 ATFNVKVKGPVKQVKWYKNGKEIPNAKAKDNGDGSYSLEIPNAQLDDTADYKVVVSNDAG 3836
Query: 239 ERQRSRAPDMRAPGELVLARVRDGVPP 319
+ S A ++ PG ++ + D P
Sbjct: 3837 DADSSAALTVKLPGIAIVKGLEDAEVP 3863
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 25.4 bits (53), Expect = 9.7
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Frame = +2
Query: 71 ATFVFRIKTISYAVRWCLYLDSVGNVKRKGFCLYSFSDCMDKSRLRQST----VHSNEIG 238
ATF ++K V+W + N K K S+S + ++L + V SN+ G
Sbjct: 4417 ATFNVKVKGPVKQVKWYKNGKEIPNAKAKDNGDGSYSLEIPNAQLDDTADYKVVVSNDAG 4476
Query: 239 ERQRSRAPDMRAPGELVLARVRDGVPP 319
+ S A ++ PG ++ + D P
Sbjct: 4477 DADSSAALTVKLPGIAIVKGLEDAEVP 4503
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 25.4 bits (53), Expect = 9.7
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Frame = +2
Query: 71 ATFVFRIKTISYAVRWCLYLDSVGNVKRKGFCLYSFSDCMDKSRLRQST----VHSNEIG 238
ATF ++K V+W + N K K S+S + ++L + V SN+ G
Sbjct: 4417 ATFNVKVKGPVKQVKWYKNGKEIPNAKAKDNGDGSYSLEIPNAQLDDTADYKVVVSNDAG 4476
Query: 239 ERQRSRAPDMRAPGELVLARVRDGVPP 319
+ S A ++ PG ++ + D P
Sbjct: 4477 DADSSAALTVKLPGIAIVKGLEDAEVP 4503
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 25.4 bits (53), Expect = 9.7
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Frame = +2
Query: 71 ATFVFRIKTISYAVRWCLYLDSVGNVKRKGFCLYSFSDCMDKSRLRQST----VHSNEIG 238
ATF ++K V+W + N K K S+S + ++L + V SN+ G
Sbjct: 3777 ATFNVKVKGPVKQVKWYKNGKEIPNAKAKDNGDGSYSLEIPNAQLDDTADYKVVVSNDAG 3836
Query: 239 ERQRSRAPDMRAPGELVLARVRDGVPP 319
+ S A ++ PG ++ + D P
Sbjct: 3837 DADSSAALTVKLPGIAIVKGLEDAEVP 3863
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 25.4 bits (53), Expect = 9.7
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Frame = +2
Query: 71 ATFVFRIKTISYAVRWCLYLDSVGNVKRKGFCLYSFSDCMDKSRLRQST----VHSNEIG 238
ATF ++K V+W + N K K S+S + ++L + V SN+ G
Sbjct: 4417 ATFNVKVKGPVKQVKWYKNGKEIPNAKAKDNGDGSYSLEIPNAQLDDTADYKVVVSNDAG 4476
Query: 239 ERQRSRAPDMRAPGELVLARVRDGVPP 319
+ S A ++ PG ++ + D P
Sbjct: 4477 DADSSAALTVKLPGIAIVKGLEDAEVP 4503
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,374,171
Number of Sequences: 27780
Number of extensions: 164031
Number of successful extensions: 422
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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