Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00214X
         (331 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   0.24 
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   2.2  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         21   2.9  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   3.9  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   5.1  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    20   8.9  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    20   8.9  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    20   8.9  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    20   8.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   8.9  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 25.0 bits (52), Expect = 0.24
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +3

Query: 132 TQLEMLSGKVFVCIVLVTVWIKADCA-SLPFIPTR 233
           +QL + SG VFV I++  VW+  D A ++   PTR
Sbjct: 767 SQLIICSGLVFVQILINGVWMIIDPAKAMHHYPTR 801


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -1

Query: 256 ATSLTLPNLVGMNGRLAQSAFIHTVTKTIQTKTFPLNISN 137
           ATSLT P  +   GR     ++     ++Q     + +SN
Sbjct: 199 ATSLTEPYTLRNYGRRINCTYVALYPSSVQVIALGVGVSN 238


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 156 KVFVCIVLVTVWIKADCASLP 218
           K FV   ++   + A CAS+P
Sbjct: 2   KFFVLFAILIAIVHASCASVP 22


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 8/33 (24%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
 Frame = +3

Query: 129 WTQLEMLSGKVFVCIVLVTVWIKAD---CASLP 218
           W Q+ ++S +  +C+  +T  +      C S P
Sbjct: 421 WKQVALVSDRALLCVFFLTTIVSTTVILCGSPP 453


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = +3

Query: 171 IVLVT-VWIKADCASLP 218
           IV V+ VW+ A C SLP
Sbjct: 159 IVYVSLVWLGAACISLP 175


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 244 TLPNLVGMNGRLAQSA 197
           TLP L+G N    QS+
Sbjct: 137 TLPTLIGKNETSTQSS 152


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 244 TLPNLVGMNGRLAQSA 197
           TLP L+G N    QS+
Sbjct: 185 TLPTLIGKNETSTQSS 200


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 244 TLPNLVGMNGRLAQSA 197
           TLP L+G N    QS+
Sbjct: 185 TLPTLIGKNETSTQSS 200


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 244 TLPNLVGMNGRLAQSA 197
           TLP L+G N    QS+
Sbjct: 185 TLPTLIGKNETSTQSS 200


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 272 LSYPVRDFFDAPQSRW 225
           LS+P  D+F+  + +W
Sbjct: 257 LSHPTYDWFEKLELKW 272


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,421
Number of Sequences: 438
Number of extensions: 2221
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)