Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00214X
         (331 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g35230.2 68415.m04322 VQ motif-containing protein contains PF...    33   0.046
At2g35230.1 68415.m04321 VQ motif-containing protein contains PF...    33   0.046

>At2g35230.2 68415.m04322 VQ motif-containing protein contains
           PF05678: VQ motif
          Length = 295

 Score = 33.1 bits (72), Expect = 0.046
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -3

Query: 311 PHRGPSLGPAHPGLSYPV--RDFFDAPQSRWNE 219
           P +GP   P  PGL +P+    FF  P  RWN+
Sbjct: 262 PSQGPPQPPPSPGLMFPLSPSGFFPMPSPRWND 294


>At2g35230.1 68415.m04321 VQ motif-containing protein contains
           PF05678: VQ motif
          Length = 402

 Score = 33.1 bits (72), Expect = 0.046
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -3

Query: 311 PHRGPSLGPAHPGLSYPV--RDFFDAPQSRWNE 219
           P +GP   P  PGL +P+    FF  P  RWN+
Sbjct: 369 PSQGPPQPPPSPGLMFPLSPSGFFPMPSPRWND 401


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,863,068
Number of Sequences: 28952
Number of extensions: 148249
Number of successful extensions: 374
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 374
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 380568784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)