Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00212X
         (333 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   1.7  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    22   1.7  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    22   1.7  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    22   1.7  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    22   1.7  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    22   1.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   1.7  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   2.2  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   2.2  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   2.2  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   3.0  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     20   6.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   6.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   9.1  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    20   9.1  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 13/54 (24%), Positives = 25/54 (46%)
 Frame = +1

Query: 91  SISSAASCSPRTSPTASYSRRYQSCSTCTTWNRSTSRCLRAPTTRCSSPTTGPP 252
           S  + +SC P  +  A+   + +S S C+    S++      ++R S  + G P
Sbjct: 149 SAPTGSSCGPGAAAAAALLSKRRSVSECSLGTASSTS--STASSRNSDRSAGSP 200


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +2

Query: 38  RSEHVRPASSLRRGGSCTASRLRPPARREHLPR-PPTHE 151
           R  H+ P++   R     A RLRPP      PR  PTH+
Sbjct: 140 RFRHIGPSTPFPRFIPPNAYRLRPPLN----PRFGPTHQ 174


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +2

Query: 38  RSEHVRPASSLRRGGSCTASRLRPPARREHLPR-PPTHE 151
           R  H+ P++   R     A RLRPP      PR  PTH+
Sbjct: 140 RFRHIGPSTPFPRFIPPNAYRLRPPLN----PRFGPTHQ 174


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +2

Query: 38  RSEHVRPASSLRRGGSCTASRLRPPARREHLPR-PPTHE 151
           R  H+ P++   R     A RLRPP      PR  PTH+
Sbjct: 140 RFRHIGPSTPFPRFIPPNAYRLRPPLN----PRFGPTHQ 174


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +2

Query: 38  RSEHVRPASSLRRGGSCTASRLRPPARREHLPR-PPTHE 151
           R  H+ P++   R     A RLRPP      PR  PTH+
Sbjct: 140 RFRHIGPSTPFPRFIPPNAYRLRPPLN----PRFGPTHQ 174


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +2

Query: 38  RSEHVRPASSLRRGGSCTASRLRPPARREHLPR-PPTHE 151
           R  H+ P++   R     A RLRPP      PR  PTH+
Sbjct: 140 RFRHIGPSTPFPRFIPPNAYRLRPPLN----PRFGPTHQ 174


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +1

Query: 166 STCTTWNRSTSRCLRAP-TTRCSSPTTGPP 252
           +T TT   +T+     P TT+ +S TT PP
Sbjct: 662 TTTTTTTTTTTTTTTTPNTTQNASATTPPP 691


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 172 CTTWNRSTSRCLRAPT 219
           C  W  STS+ LR P+
Sbjct: 77  CVIWIFSTSKSLRTPS 92


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +2

Query: 38  RSEHVRPASSLRRGGSCTASRLRPPARREHLPR-PPTHE 151
           R  H+ P++   R     A RLRPP      PR  PTH+
Sbjct: 140 RFRHIGPSTLFPRFIPPNAYRLRPPLN----PRFGPTHQ 174


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 172 CTTWNRSTSRCLRAPT 219
           C  W  STS+ LR P+
Sbjct: 77  CVIWIFSTSKSLRTPS 92


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 247 PPYGLLXSRALHHSQY 294
           PPYG+  + A H++ Y
Sbjct: 761 PPYGMELTEAEHYALY 776


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +2

Query: 239 PQDHPTDFXAPGLCITLSTDDP 304
           P D  T    P L + L  DDP
Sbjct: 309 PSDGATSEPFPFLMLPLGADDP 330


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 190 STSRCLRAPTTRCSSP 237
           ++S    APT+ CSSP
Sbjct: 593 ASSSASSAPTSVCSSP 608


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 15  LNHFRKEQGLNTF 53
           LN+F ++ GLNT+
Sbjct: 220 LNYFIEDIGLNTY 232


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = +1

Query: 244 GPPYGLLXSRALHHSQYRRSPAVSIHQG 327
           GP    L    +HH  + + P +   QG
Sbjct: 157 GPDSPPLVESQMHHQMHTQHPHMQPQQG 184


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,094
Number of Sequences: 438
Number of extensions: 2227
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)