Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00212X
(333 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g38280.2 68415.m04702 AMP deaminase, putative / myoadenylate ... 83 3e-17
At2g38280.1 68415.m04701 AMP deaminase, putative / myoadenylate ... 83 3e-17
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 36 0.007
At3g13460.2 68416.m01694 expressed protein contains Pfam profile... 29 0.59
At3g13460.1 68416.m01693 expressed protein contains Pfam profile... 29 0.59
At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing ... 29 0.77
At3g54680.1 68416.m06050 proteophosphoglycan-related contains si... 29 1.0
At4g12370.1 68417.m01955 hypothetical protein 28 1.4
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 28 1.4
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 28 1.8
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 28 1.8
At1g79400.1 68414.m09253 cation/proton exchanger, putative (CHX2... 28 1.8
At4g39330.1 68417.m05568 mannitol dehydrogenase, putative nearly... 27 3.1
At4g37990.1 68417.m05368 mannitol dehydrogenase, putative (ELI3-... 27 3.1
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 27 3.1
At5g55750.1 68418.m06949 hydroxyproline-rich glycoprotein family... 27 4.1
At5g35980.1 68418.m04333 protein kinase family protein contains ... 27 4.1
At5g01280.1 68418.m00037 expressed protein 27 4.1
At2g21890.1 68415.m02601 mannitol dehydrogenase, putative simila... 27 4.1
At2g21730.1 68415.m02585 mannitol dehydrogenase, putative simila... 27 4.1
At1g16380.1 68414.m01959 cation/proton exchanger, putative (CHX1... 27 4.1
At3g46230.1 68416.m05004 17.4 kDa class I heat shock protein (HS... 26 5.5
At3g17700.1 68416.m02259 cyclic nucleotide-binding transporter 1... 26 5.5
At3g11385.1 68416.m01386 DC1 domain-containing protein contains ... 26 5.5
At5g28130.1 68418.m03397 hypothetical protein 26 7.2
At4g37980.1 68417.m05367 mannitol dehydrogenase, putative (ELI3-... 26 7.2
At4g34230.1 68417.m04864 cinnamyl-alcohol dehydrogenase, putativ... 26 7.2
At4g29090.1 68417.m04163 reverse transcriptase, putative / RNA-d... 26 7.2
At4g08280.1 68417.m01368 expressed protein hypothetical protein ... 26 7.2
At4g37000.1 68417.m05242 accelerated cell death 2 (ACD2) identic... 25 9.5
At4g29230.1 68417.m04181 no apical meristem (NAM) family protein... 25 9.5
At4g26490.1 68417.m03812 expressed protein 25 9.5
At4g18740.2 68417.m02770 expressed protein 25 9.5
At4g18740.1 68417.m02769 expressed protein 25 9.5
At3g60730.1 68416.m06794 pectinesterase family protein contains ... 25 9.5
At3g24880.1 68416.m03120 expressed protein 25 9.5
At3g24870.1 68416.m03119 expressed protein 25 9.5
At2g47930.1 68415.m05993 hydroxyproline-rich glycoprotein family... 25 9.5
>At2g38280.2 68415.m04702 AMP deaminase, putative / myoadenylate
deaminase, putative similar to SP|P15274 AMP deaminase
(EC 3.5.4.6) (Myoadenylate deaminase) {Saccharomyces
cerevisiae}; contains Pfam profile PF00962:
Adenosine/AMP deaminase
Length = 839
Score = 83.4 bits (197), Expect = 3e-17
Identities = 43/97 (44%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +3
Query: 3 NMTVLNHFRKEQGLNTFVLRPHCGEAGPVQHLVCGLLLAENISHGLLLTKVPVXXXXXXX 182
N+ VLN R+ +G+ T LRPH GEAG + HL L +I+HG+ L K PV
Sbjct: 638 NLYVLNKLRESKGMTTITLRPHSGEAGDIDHLAATFLTCHSIAHGINLRKSPVLQYLYYL 697
Query: 183 XXXXXAMSPRTNNSLFLTYHRTTLRTSXLQG-SASLS 290
AMSP +NNSLFL YHR L+G + SLS
Sbjct: 698 AQIGLAMSPLSNNSLFLDYHRNPFPVFFLRGLNVSLS 734
Score = 33.5 bits (73), Expect = 0.036
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +2
Query: 260 FXAPGLCITLSTDDPLQYQSTKEP 331
F GL ++LSTDDPLQ TKEP
Sbjct: 724 FFLRGLNVSLSTDDPLQIHLTKEP 747
>At2g38280.1 68415.m04701 AMP deaminase, putative / myoadenylate
deaminase, putative similar to SP|P15274 AMP deaminase
(EC 3.5.4.6) (Myoadenylate deaminase) {Saccharomyces
cerevisiae}; contains Pfam profile PF00962:
Adenosine/AMP deaminase
Length = 839
Score = 83.4 bits (197), Expect = 3e-17
Identities = 43/97 (44%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +3
Query: 3 NMTVLNHFRKEQGLNTFVLRPHCGEAGPVQHLVCGLLLAENISHGLLLTKVPVXXXXXXX 182
N+ VLN R+ +G+ T LRPH GEAG + HL L +I+HG+ L K PV
Sbjct: 638 NLYVLNKLRESKGMTTITLRPHSGEAGDIDHLAATFLTCHSIAHGINLRKSPVLQYLYYL 697
Query: 183 XXXXXAMSPRTNNSLFLTYHRTTLRTSXLQG-SASLS 290
AMSP +NNSLFL YHR L+G + SLS
Sbjct: 698 AQIGLAMSPLSNNSLFLDYHRNPFPVFFLRGLNVSLS 734
Score = 33.5 bits (73), Expect = 0.036
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +2
Query: 260 FXAPGLCITLSTDDPLQYQSTKEP 331
F GL ++LSTDDPLQ TKEP
Sbjct: 724 FFLRGLNVSLSTDDPLQIHLTKEP 747
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 35.9 bits (79), Expect = 0.007
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 20 PFPQGARSEHVRPASSLRRGGSCTASRLR--PPARREHLPRPPTHEGTSPAVP 172
P P R P + RR S A R R PPARR P PP SP+ P
Sbjct: 333 PSPPARRHRSPTPPARQRRSPSPPARRHRSPPPARRRRSPSPPARRRRSPSPP 385
Score = 32.7 bits (71), Expect = 0.063
Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +2
Query: 20 PFPQGARSEHVRPASSLRRGGSCTASRLR---PPARREHLPRPPTHEGTSPAVP 172
P P R PA RR S A R R PPARR P PP + SP+ P
Sbjct: 304 PAPSRRRRSPSPPARR-RRSPSPPARRRRSPSPPARRHRSPTPPARQRRSPSPP 356
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +2
Query: 56 PASSLRRGGSCTASRLR----PPARREHLPRPPTHEGTSPA 166
P+ RR S +R R PPARR P PP SP+
Sbjct: 353 PSPPARRHRSPPPARRRRSPSPPARRRRSPSPPARRRRSPS 393
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Frame = +2
Query: 35 ARSEHVRPASSLRRGGSCTASRLR---PPARREHLPRPPTHEGTSPA 166
AR P + RR S A R R PPARR P P SP+
Sbjct: 357 ARRHRSPPPARRRRSPSPPARRRRSPSPPARRRRSPSPLYRRNRSPS 403
Score = 25.8 bits (54), Expect = 7.2
Identities = 24/84 (28%), Positives = 28/84 (33%), Gaps = 1/84 (1%)
Frame = +2
Query: 26 PQGARSEHVRPASSLRRGGSCTASRL-RPPARREHLPRPPTHEGTSPAVPVLLGTDLHRD 202
P GAR P+ R A RL PP RR LP PP + P G
Sbjct: 437 PTGARLPS--PSIEQRLPSPPVAQRLPSPPPRRAGLPSPPPAQRLPSPPPRRAGLPSPMR 494
Query: 203 VSAHQQLVVPHLPQDHPTDFXAPG 274
+ HL P+ PG
Sbjct: 495 IGGSH--AANHLESPSPSSLSPPG 516
>At3g13460.2 68416.m01694 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 664
Score = 29.5 bits (63), Expect = 0.59
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +2
Query: 101 LRPPARREHLPRPPTHEGTSPAVPVLLGTDLHRDVSAHQQLVVPHLPQDHPTDFXAPGLC 280
L PA+ +P P AV G D+H V ++ + + P L P+D P +C
Sbjct: 17 LDSPAKASEIPEP----NKKTAVYQYGGVDVHGQVPSYDRSLTPML----PSDAADPSVC 68
Query: 281 ITLSTDDPLQY 313
+ +P QY
Sbjct: 69 YVPNPYNPYQY 79
>At3g13460.1 68416.m01693 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 667
Score = 29.5 bits (63), Expect = 0.59
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +2
Query: 101 LRPPARREHLPRPPTHEGTSPAVPVLLGTDLHRDVSAHQQLVVPHLPQDHPTDFXAPGLC 280
L PA+ +P P AV G D+H V ++ + + P L P+D P +C
Sbjct: 20 LDSPAKASEIPEP----NKKTAVYQYGGVDVHGQVPSYDRSLTPML----PSDAADPSVC 71
Query: 281 ITLSTDDPLQY 313
+ +P QY
Sbjct: 72 YVPNPYNPYQY 82
>At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing
protein
Length = 809
Score = 29.1 bits (62), Expect = 0.77
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +2
Query: 92 ASRLRPPARREHLPRPPTHEGTSPAVPVLLGTDLHRDVSAHQQLVVP 232
A + PPAR LP P P VP+ L RD +L P
Sbjct: 558 ARPMPPPARARPLPPPARSYDRRPPVPLYPKASLKRDYDRRDELPPP 604
>At3g54680.1 68416.m06050 proteophosphoglycan-related contains
similarity to proteophosphoglycan [Leishmania major]
gi|5420389|emb|CAB46680
Length = 211
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 115 SPRTSPTASYSRRYQSCSTCTTWNRSTSRCLRAPTTRCSSPTTGPP 252
S +S +ASYS +S +S+ + LR+P+ ++ TT PP
Sbjct: 25 SSSSSSSASYSSVARSNGRMLVLTKSSPKPLRSPSAAPTTTTTAPP 70
>At4g12370.1 68417.m01955 hypothetical protein
Length = 300
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 46 TRSSCVLTAERRVLYSISSAASCSPRTSPTASYSRRYQSCSTCTTWNRS 192
T +CVL A + V Y I++ ++C P+ + + ++ T N S
Sbjct: 81 TSGTCVLLAFKHVSYRITTTSTCHPKATEWVTEDLQFHRRFRSETLNHS 129
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +2
Query: 20 PFPQGARSEHVRPASSLRRGG---SCTASRLRPPARREHLPRPPTHEGTSPAVP 172
P P +S P SL S + L PP ++ P PP+H +SP+ P
Sbjct: 118 PHPTPKKSPSPPPTPSLPPPAPKKSPSTPSLPPPTPKKSPPPPPSHHSSSPSNP 171
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 77 GGSCTASRLRPPARREHLPRPPTHEGTSP 163
G S + S RPP R PRPPT + P
Sbjct: 143 GSSPSPSPSRPPKRSRGPPRPPTRPKSPP 171
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 77 GGSCTASRLRPPARREHLPRPPTHEGTSP 163
G S + S RPP R PRPPT + P
Sbjct: 143 GSSPSPSPSRPPKRSRGPPRPPTRPKSPP 171
>At1g79400.1 68414.m09253 cation/proton exchanger, putative (CHX2)
monovalent cation:proton antiporter family 2 (CPA2)
member, PMID:11500563
Length = 783
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +3
Query: 54 VLRPHCGEAGPVQHLVCGLLLAENISHGLLLTKVP 158
+L+P CG+AGPV ++ G++L+ +LL+++P
Sbjct: 39 LLKP-CGQAGPVAQILAGIVLSP-----VLLSRIP 67
>At4g39330.1 68417.m05568 mannitol dehydrogenase, putative nearly
identical to SP|P42734, probable mannitol dehydrogenase
Length = 360
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 218 QLVVPHLPQDHPTDFXAPGLCITLSTDDPLQYQSTKE 328
Q V P++ P+D AP LC ++ P++Y E
Sbjct: 146 QRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGMTE 182
>At4g37990.1 68417.m05368 mannitol dehydrogenase, putative (ELI3-2)
identical to GI:16269
Length = 359
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 227 VPHLPQDHPTDFXAPGLCITLSTDDPLQYQSTKEP 331
V +P + P D AP LC ++ P++Y +P
Sbjct: 145 VIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKP 179
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 8 DCTEPFPQGARSEHVRPASSLRRGGSCTASRLRPPARREHLPRPPT 145
DCT P P A H P ++ +PPA + P+PPT
Sbjct: 26 DCTPPKPSPA--PHKPPKHPVKPPKPPAVKPPKPPAVKPPTPKPPT 69
>At5g55750.1 68418.m06949 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 175
Score = 26.6 bits (56), Expect = 4.1
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Frame = +1
Query: 109 SCSPRTSPTASY------SRRYQSCSTCTTWNRSTSRCLRAPTTRCSSPTTGPPYGLLXS 270
SC PR + Y S +Y + + SRC PTT C + GPP + S
Sbjct: 51 SCKPRLQRYSPYGNPPPPSPQYSPPPPPSQSSPPRSRCPPVPTTGCCNQPPGPPPSTMYS 110
>At5g35980.1 68418.m04333 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 956
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 124 TSPTASYSRRYQSCSTCTTWNRSTSRCLRAPTTRCSSPTTGPP 252
++ +SYSRR+ S ++ ++ N +T R AP S TG P
Sbjct: 807 STDASSYSRRFNSNASTSSSNPTTQR-RYAPNQAFSQVETGSP 848
>At5g01280.1 68418.m00037 expressed protein
Length = 460
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +1
Query: 115 SPRTSPTASYSRRYQSCSTCTTWNRSTSRCLRAPTTRCSSPTTG 246
S TS T S+SR S T T+ T+ PTT TTG
Sbjct: 130 SSTTSSTRSWSRPSSSSGTGTSRVTLTAARATRPTTSTDQQTTG 173
>At2g21890.1 68415.m02601 mannitol dehydrogenase, putative similar
to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase
(Populus tremuloides) (gi:14279694); contains Pfam
zinc-binding dehydrogenase domain PF00107
Length = 375
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 194 HRDVSAHQQLVVPHLPQDHPTDFXAPGLCITLSTDDPLQYQS-TKE 328
+ DV V +P P+D AP LC ++ P++Y TKE
Sbjct: 132 YSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKE 177
>At2g21730.1 68415.m02585 mannitol dehydrogenase, putative similar
to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase
(Populus tremuloides) (gi:14279694); contains Pfam
zinc-binding dehydrogenase domain PF00107
Length = 376
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 194 HRDVSAHQQLVVPHLPQDHPTDFXAPGLCITLSTDDPLQYQS-TKE 328
+ DV V +P P+D AP LC ++ P++Y TKE
Sbjct: 133 YSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKE 178
>At1g16380.1 68414.m01959 cation/proton exchanger, putative (CHX1)
monovalent cation:proton antiporter family 2 (CPA2)
member, PMID:11500563
Length = 785
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 57 LRPHCGEAGPVQHLVCGLLLA 119
L+P CG+AGPV ++ G++L+
Sbjct: 40 LKP-CGQAGPVAQILAGIVLS 59
>At3g46230.1 68416.m05004 17.4 kDa class I heat shock protein
(HSP17.4-CI) identical to 17.4 kDa class I heat shock
protein SP:P19036 from [Arabidopsis thaliana]
Length = 156
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 64 GRRTNVFRPCSLRKW 20
GRRTNVF P SL W
Sbjct: 10 GRRTNVFDPFSLDVW 24
>At3g17700.1 68416.m02259 cyclic nucleotide-binding transporter 1 /
CNBT1 (CNGC20) identical to cyclic nucleotide-binding
transporter 1 (CNBT1) GI:8131898 from [Arabidopsis
thaliana]; member of the cyclic nucleotide-gated channel
(CNGC) family- see PMID:11500563
Length = 764
Score = 26.2 bits (55), Expect = 5.5
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 57 GRTCSDLAPCGNGS 16
GR C DL CGNG+
Sbjct: 405 GRECQDLIDCGNGN 418
>At3g11385.1 68416.m01386 DC1 domain-containing protein contains
Pfam protein PF03107 DC1 domain
Length = 766
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 109 SCSPRTSPTASYSRRYQSCSTCTTWNRSTSRCLRAP 216
SC TSP + SC+TC S CLR P
Sbjct: 203 SCGENTSPMTEDQIYHFSCTTCDVEFHS-GHCLRFP 237
>At5g28130.1 68418.m03397 hypothetical protein
Length = 115
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3
Query: 172 RYCRTGTFVSRRPWEMFSASR 110
R+C T + SRRP ++S+SR
Sbjct: 75 RFCETPSRTSRRPATLYSSSR 95
>At4g37980.1 68417.m05367 mannitol dehydrogenase, putative (ELI3-1)
identical to GI:16267
Length = 357
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 236 LPQDHPTDFXAPGLCITLSTDDPLQYQSTKEP 331
+P + P D AP LC ++ P++Y +P
Sbjct: 148 IPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKP 179
>At4g34230.1 68417.m04864 cinnamyl-alcohol dehydrogenase, putative
similar to cinnamyl alcohol dehydrogenase, Nicotiana
tabacum [SP|P30359], Populus deltoides, PATCHX:G288753
Length = 357
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 212 HQQLVVPHLPQDHPTDFXAPGLCITLSTDDPLQYQSTKEP 331
HQ+ VV +P+ + AP LC ++ PL + K+P
Sbjct: 142 HQKFVVK-IPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQP 180
>At4g29090.1 68417.m04163 reverse transcriptase, putative /
RNA-dependent DNA polymerase, putative similar to
reverse transcriptase [Arabidopsis thaliana] GI:976278;
contains Pfam profile PF00075: RNase H
Length = 575
Score = 25.8 bits (54), Expect = 7.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 151 RYQSCSTCTTWNRSTSRC 204
++ C+T TWNR RC
Sbjct: 426 QWVKCNTDATWNRDNERC 443
>At4g08280.1 68417.m01368 expressed protein hypothetical protein
ssr1391 - Synechocystis sp. (strain PCC
6803),PIR2:S75571
Length = 126
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 52 SSCVLTAERRVLY-SISSAASCSPRTSPTASYSRRYQSCSTC 174
++ V A RR L+ S+SS++S P T YS+ C C
Sbjct: 7 ATLVFAARRRPLFCSLSSSSSSKPNTRKLVLYSK--PGCCLC 46
>At4g37000.1 68417.m05242 accelerated cell death 2 (ACD2) identical
to accelerated cell death 2 (ACD2) GI:12484129 from
[Arabidopsis thaliana]
Length = 319
Score = 25.4 bits (53), Expect = 9.5
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +2
Query: 47 HVRPASSLRRGGSCTASRLRPPARREHLPRPPTHEGTSPAVPVLLGTDLHRDVSAHQQLV 226
+V P+ +R S TAS L+ A E + SPA +L L R V ++ +
Sbjct: 207 YVSPSLFVRSAFSPTASMLKIDAEEEDKLEEILRDHVSPAAKEVLEVWLERCVKEEEEKI 266
Query: 227 V 229
V
Sbjct: 267 V 267
>At4g29230.1 68417.m04181 no apical meristem (NAM) family protein
similar to NAM family proteins GP|12751304|,
GP|6223650|, GP|9758909 - Arabidopsis
thaliana,PIR2:T04621
Length = 498
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +2
Query: 32 GARSEHVRPASSLRRGGSCTASR----LRPPARREHL 130
G H+R S GGSC++SR + PP R + +
Sbjct: 245 GGGEYHMRRDSGTTSGGSCSSSREIINVNPPNRSDEI 281
>At4g26490.1 68417.m03812 expressed protein
Length = 200
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 223 RCSSPTTGPPYGLLXSR 273
RC TGPP G+L SR
Sbjct: 178 RCQLQMTGPPTGILISR 194
>At4g18740.2 68417.m02770 expressed protein
Length = 214
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 89 TASRLRPPARREHLPRPPT 145
T+ + +PP R+ LPRPP+
Sbjct: 151 TSVKEKPPKRQVELPRPPS 169
>At4g18740.1 68417.m02769 expressed protein
Length = 245
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 89 TASRLRPPARREHLPRPPT 145
T+ + +PP R+ LPRPP+
Sbjct: 151 TSVKEKPPKRQVELPRPPS 169
>At3g60730.1 68416.m06794 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 519
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 98 RLRPPARREHLPRPPTHEGTSP 163
RL PAR+ H P P H T P
Sbjct: 152 RLHGPARQGHGPTRPKHRPTRP 173
>At3g24880.1 68416.m03120 expressed protein
Length = 1957
Score = 25.4 bits (53), Expect = 9.5
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 77 GGSCTASRLRPPARREHLPRPPTHEGTSPAVPVLLG-TDLHRDVSAHQQLVVPHLPQDH 250
G S S +RP +H+ R +G SP +P + + + Q HL Q H
Sbjct: 1425 GASQGNSMIRPREAVQHMMRMQAAQGNSPGIPAFSNLSSGFTNQTTPVQAYPGHLSQQH 1483
>At3g24870.1 68416.m03119 expressed protein
Length = 1841
Score = 25.4 bits (53), Expect = 9.5
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 77 GGSCTASRLRPPARREHLPRPPTHEGTSPAVPVLLG-TDLHRDVSAHQQLVVPHLPQDH 250
G S S +RP +H+ R +G SP +P + + + Q HL Q H
Sbjct: 1311 GASQGNSMIRPREAVQHMMRMQAAQGNSPGIPAFSNLSSGFTNQTTPVQAYPGHLSQQH 1369
>At2g47930.1 68415.m05993 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 136
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +3
Query: 198 AMSPRTNNSLFLTYHRTTLRTSXLQGSASLSVPTIPCSINPP 323
AMSP T+ LF T + + S + S +PTIP S++PP
Sbjct: 48 AMSPDTS-PLFPTPGSSEMSPSPSESSI---MPTIPSSLSPP 85
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,492,254
Number of Sequences: 28952
Number of extensions: 152193
Number of successful extensions: 544
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 390583752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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