Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00211
         (832 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    26   1.2  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    26   1.2  
AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450 CY...    24   6.5  

>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 580 KVKA*VMDLLCIFYLVCGTIIATVCMVL 663
           K  A V+D  C+F     TIIATV ++L
Sbjct: 455 KFAAMVVDRFCLFVFTLFTIIATVTVLL 482


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 580 KVKA*VMDLLCIFYLVCGTIIATVCMVL 663
           K  A V+D  C+F     TIIATV ++L
Sbjct: 455 KFAAMVVDRFCLFVFTLFTIIATVTVLL 482


>AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450
           CYP12F1 protein.
          Length = 522

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -1

Query: 691 VIDCQYRISLEPYILLQLLFRKPGRKCTISPL 596
           + D  YR+  EP  +L   F+ P  K  +  L
Sbjct: 241 IFDLMYRLEFEPEYVLWKYFQTPSLKLLMQEL 272


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,507
Number of Sequences: 2352
Number of extensions: 14411
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 87651612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)