Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00211
         (832 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061312-1|AAL28860.1|  647|Drosophila melanogaster LD23155p pro...    29   5.9  
AE013599-3127|AAF46670.2|  647|Drosophila melanogaster CG4030-PA...    29   5.9  
AE014297-1946|AAF55136.1| 1332|Drosophila melanogaster CG6752-PA...    29   7.8  

>AY061312-1|AAL28860.1|  647|Drosophila melanogaster LD23155p
           protein.
          Length = 647

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 668 NAILTINYHQIEYLYISHVYCDKC 739
           NA  T+   +I   +  H+YCDKC
Sbjct: 573 NAYFTVMVRKIHCRHCGHIYCDKC 596


>AE013599-3127|AAF46670.2|  647|Drosophila melanogaster CG4030-PA
           protein.
          Length = 647

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 668 NAILTINYHQIEYLYISHVYCDKC 739
           NA  T+   +I   +  H+YCDKC
Sbjct: 573 NAYFTVMVRKIHCRHCGHIYCDKC 596


>AE014297-1946|AAF55136.1| 1332|Drosophila melanogaster CG6752-PA
           protein.
          Length = 1332

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -3

Query: 404 DILLYKTMKQTNLIENKINTHKNLHTLLS 318
           D+LL K    TNL   K N++  LH LLS
Sbjct: 337 DVLLRKISSMTNLASEKENSYSVLHGLLS 365


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,746,648
Number of Sequences: 53049
Number of extensions: 543988
Number of successful extensions: 1165
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)