Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00210X
(503 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 123 2e-27
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 121 1e-26
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 106 3e-22
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 100 2e-20
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 99 5e-20
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 96 3e-19
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 93 2e-18
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 93 4e-18
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 79 4e-14
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 79 6e-14
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 74 2e-12
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 67 2e-10
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 67 2e-10
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 62 5e-09
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 62 9e-09
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 59 6e-08
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 58 9e-08
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 57 3e-07
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 56 3e-07
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 56 5e-07
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 55 1e-06
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 49 5e-05
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 48 9e-05
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 43 0.005
UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa s... 40 0.024
UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2; Bacteri... 38 0.13
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 38 0.13
UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14; Campyl... 38 0.13
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 38 0.17
UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11; Epsilo... 36 0.52
UniRef50_A1UB26 Cluster: Putative uncharacterized protein; n=3; ... 35 0.91
UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 35 1.2
UniRef50_Q14591-2 Cluster: Isoform 2 of Q14591 ; n=2; Homo sapie... 34 1.6
UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycopla... 34 2.1
UniRef50_A3BRD0 Cluster: Putative uncharacterized protein; n=2; ... 33 2.8
UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983... 33 2.8
UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1; Thiomic... 33 4.8
UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8; Gammapr... 33 4.8
UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12; Bacter... 32 6.4
UniRef50_UPI0000DB6FFA Cluster: PREDICTED: similar to Papilin CG... 32 8.5
UniRef50_UPI0000D5619C Cluster: PREDICTED: similar to CG3077-PA;... 32 8.5
UniRef50_UPI0000498B81 Cluster: conserved hypothetical protein; ... 32 8.5
UniRef50_Q9BTT3 Cluster: LAMA5 protein; n=1; Homo sapiens|Rep: L... 32 8.5
UniRef50_O15230 Cluster: Laminin subunit alpha-5 precursor; n=16... 32 8.5
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 123 bits (297), Expect = 2e-27
Identities = 61/85 (71%), Positives = 71/85 (83%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 MAD-QTERSFQKQPTVFLNRKRGI-GVKRSRKPLRYHKDVGLGFKTPREAIXGTYIDKKC 179
MAD QTER++QKQPT+F N+KR + G K RY+K++GLGFKTP+EAI GTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 180 PFTGNVSIRCRILTGVVQKMKMQRT 254
PFTGNVSIR RIL+GVV KMKMQRT
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRT 85
Score = 117 bits (281), Expect = 2e-25
Identities = 50/55 (90%), Positives = 54/55 (98%)
Frame = +2
Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 421
VIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFN
Sbjct: 87 VIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFN 141
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 121 bits (291), Expect = 1e-26
Identities = 62/84 (73%), Positives = 67/84 (79%)
Frame = +3
Query: 3 KMADQTERSFQKQPTVFLNRKRGIGVKRSRKPLRYHKDVGLGFKTPREAIXGTYIDKKCP 182
K +TE++FQKQP VFL K S+KPLR +K VGLGFKTPREAI GTYIDKKCP
Sbjct: 43 KTPRETEKAFQKQPHVFLASKVS-----SKKPLRRYKSVGLGFKTPREAIEGTYIDKKCP 97
Query: 183 FTGNVSIRCRILTGVVQKMKMQRT 254
FTGNVSIR RILTGVVQKMKMQRT
Sbjct: 98 FTGNVSIRGRILTGVVQKMKMQRT 121
Score = 117 bits (282), Expect = 1e-25
Identities = 50/55 (90%), Positives = 54/55 (98%)
Frame = +2
Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 421
VIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDVEIGD+VT+GECRPLSKTVRFN
Sbjct: 123 VIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFRDVEIGDVVTVGECRPLSKTVRFN 177
Score = 82.6 bits (195), Expect = 5e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +3
Query: 6 MADQTERSFQKQPTVFLNRKRGIGVKRSRKPLRYHKDVGLGFKTPRE 146
MADQTERSFQKQPT+FLNRK+G+GVK+ LRY ++VGLGFKTPRE
Sbjct: 1 MADQTERSFQKQPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 106 bits (254), Expect = 3e-22
Identities = 52/84 (61%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 MADQTERSFQKQPTVFLNRKR-GIGVKRSRKPLRYHKDVGLGFKTPREAIXGTYIDKKCP 182
MA+QTE++F KQP VFL+ K+ G G K + R+ K +GLGFKTPREAI GTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 183 FTGNVSIRCRILTGVVQKMKMQRT 254
FTG VSIR RI+ G KM RT
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRT 84
Score = 64.9 bits (151), Expect = 1e-09
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +2
Query: 299 RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 421
R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFN
Sbjct: 124 RYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRFN 163
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 100 bits (240), Expect = 2e-20
Identities = 50/80 (62%), Positives = 57/80 (71%)
Frame = +3
Query: 15 QTERSFQKQPTVFLNRKRGIGVKRSRKPLRYHKDVGLGFKTPREAIXGTYIDKKCPFTGN 194
Q+ER+FQKQP +F N K+G G R++KDVGLGFKTP EAI G Y+DKKCPF G
Sbjct: 8 QSERAFQKQPHIFQNAKKGAG-------RRWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQ 60
Query: 195 VSIRCRILTGVVQKMKMQRT 254
VSIR RILTG V KM RT
Sbjct: 61 VSIRGRILTGTVVSTKMHRT 80
Score = 94.7 bits (225), Expect = 1e-18
Identities = 37/55 (67%), Positives = 50/55 (90%)
Frame = +2
Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 421
+IRR+YLH++PKYNR+EKRH+N++ H+SP FR + GD+VT+G+CRPLSKTVRFN
Sbjct: 82 IIRREYLHFIPKYNRYEKRHKNLAAHVSPAFR-INEGDVVTVGQCRPLSKTVRFN 135
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 99.1 bits (236), Expect = 5e-20
Identities = 49/80 (61%), Positives = 60/80 (75%)
Frame = +3
Query: 15 QTERSFQKQPTVFLNRKRGIGVKRSRKPLRYHKDVGLGFKTPREAIXGTYIDKKCPFTGN 194
Q+ER+FQKQP +F N K VK S++ R++K+ GLGFKTP+ AI G+YIDKKCPFTG
Sbjct: 8 QSERAFQKQPHIFNNPK----VKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGL 63
Query: 195 VSIRCRILTGVVQKMKMQRT 254
VSIR +ILTG V KM RT
Sbjct: 64 VSIRGKILTGTVVSTKMHRT 83
Score = 98.7 bits (235), Expect = 7e-20
Identities = 41/55 (74%), Positives = 51/55 (92%)
Frame = +2
Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 421
VIRR YLHY+PKYNR+EKRH+N+ VH+SP FR V++GDIVT+G+CRP+SKTVRFN
Sbjct: 85 VIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFR-VQVGDIVTVGQCRPISKTVRFN 138
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 96.3 bits (229), Expect = 3e-19
Identities = 45/80 (56%), Positives = 59/80 (73%)
Frame = +3
Query: 15 QTERSFQKQPTVFLNRKRGIGVKRSRKPLRYHKDVGLGFKTPREAIXGTYIDKKCPFTGN 194
+ +R+FQKQ +F N K+ + K++ K +RY K+VGLGFK P++AI G YIDKKCPFTGN
Sbjct: 34 KNQRAFQKQEGIFQNSKKLLA-KKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGN 92
Query: 195 VSIRCRILTGVVQKMKMQRT 254
VS+R IL G+V KM RT
Sbjct: 93 VSVRGAILKGIVISTKMTRT 112
Score = 95.1 bits (226), Expect = 8e-19
Identities = 40/55 (72%), Positives = 47/55 (85%)
Frame = +2
Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 421
+IRRDYLHY+ KYNR+EKRHRN+ VH+SP F V+ GDIV G+CRPLSKTVRFN
Sbjct: 114 IIRRDYLHYVAKYNRYEKRHRNVPVHISPAFGPVKEGDIVVCGQCRPLSKTVRFN 168
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 93.5 bits (222), Expect = 2e-18
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = +2
Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 421
+IRRDYLH++ KY RFEKRH+N+ H SPCFR V+ GD+VTIG+CRPLSKT+RFN
Sbjct: 74 IIRRDYLHWISKYKRFEKRHKNIPCHCSPCFR-VQEGDLVTIGQCRPLSKTIRFN 127
Score = 61.3 bits (142), Expect = 1e-08
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +3
Query: 87 SRKPLRYHKDVGLGFKTPREAIXGTYIDKKCPFTGNVSIRCRILTGVVQKMKMQRT 254
++K K++G+G K P EAI Y DKKCPF G +SIR RIL G V KM+R+
Sbjct: 17 TKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRS 72
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 92.7 bits (220), Expect = 4e-18
Identities = 44/81 (54%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 QTERSFQKQPTVFLNRKRGIGVKRSRKPLRYHKDVGLGFKTPREAIXGTYIDKKCPFTGN 194
QT +QKQ +F+ +KR +G+K + RY + VGLG+KTP+ A+ GT++D KCPFTGN
Sbjct: 6 QTGLFYQKQKPIFVGKKRLLGLKLKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGN 65
Query: 195 VSIRCRILTGVVQKM-KMQRT 254
VSIR RIL GVV KM+RT
Sbjct: 66 VSIRGRILRGVVVSAGKMKRT 86
Score = 88.6 bits (210), Expect = 7e-17
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = +2
Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 421
V+RR+YLHY+ KY R+EKRH N SVH SP DV+ GD VT+GECRPLSKTVRFN
Sbjct: 88 VVRRNYLHYIQKYKRYEKRHTNFSVHCSPAL-DVKEGDTVTVGECRPLSKTVRFN 141
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 79.4 bits (187), Expect = 4e-14
Identities = 32/55 (58%), Positives = 46/55 (83%)
Frame = +2
Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 421
+IRR+YLH++ KY R++KRH++++VH SP F D + GD V IG+CRPLSKT+R+N
Sbjct: 68 IIRRNYLHFIKKYQRYQKRHKSLAVHCSPAF-DPKQGDEVVIGQCRPLSKTIRYN 121
Score = 76.2 bits (179), Expect = 4e-13
Identities = 34/52 (65%), Positives = 39/52 (75%)
Frame = +3
Query: 99 LRYHKDVGLGFKTPREAIXGTYIDKKCPFTGNVSIRCRILTGVVQKMKMQRT 254
+RY K +GLGFKTP +A+ G YID+KCPFT NV IR RIL GVV KM RT
Sbjct: 15 IRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMHRT 66
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 79.0 bits (186), Expect = 6e-14
Identities = 37/64 (57%), Positives = 46/64 (71%)
Frame = +3
Query: 63 KRGIGVKRSRKPLRYHKDVGLGFKTPREAIXGTYIDKKCPFTGNVSIRCRILTGVVQKMK 242
+R + KR K R+ K++GLGFKTPREAI G Y+DKKCPFTG VSIR RIL + + +
Sbjct: 29 RRNLEGKRPGKVERFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILVWYLPQCE 88
Query: 243 MQRT 254
MQ T
Sbjct: 89 MQST 92
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 74.1 bits (174), Expect = 2e-12
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = +2
Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 421
+IR DYL +L KYNRF KRH+N+ HLS ++GDIV I ECRP+SKTVRFN
Sbjct: 54 IIRIDYLKFLKKYNRFVKRHKNIPAHLSNLL-TCKVGDIVIIAECRPISKTVRFN 107
Score = 42.7 bits (96), Expect = 0.005
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 165 IDKKCPFTGNVSIRCRILTGVVQKMKMQRT 254
IDKKCPF G +++R RIL G V+K+KM+ T
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKST 52
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 67.3 bits (157), Expect = 2e-10
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = +2
Query: 248 ENFVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 418
++ ++ R+++ Y+ K+ R+EKR R + HL C DV +GD V I ECRPLSKT+ F
Sbjct: 46 KSIIVEREHIRYMQKFERYEKRTRRYAAHLPSCIGDVNVGDSVRIMECRPLSKTITF 102
Score = 31.9 bits (69), Expect = 8.5
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +3
Query: 168 DKKCPFTGNVSIRCRILTGVVQKMKMQRT 254
D+ CPF G++ +R +I+ G + K+ MQ++
Sbjct: 19 DENCPFYGSLRLRGQIIEGTIAKVGMQKS 47
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 66.9 bits (156), Expect = 2e-10
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +2
Query: 248 ENFVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRD-VEIGDIVTIGECRPLSKT 409
+ V+ +Y+HY KY R+ +RH N SVH+SPCF + +GD V GE RPLSKT
Sbjct: 79 KTIVVVANYVHYSKKYKRYSRRHTNFSVHMSPCFEGMINVGDTVICGETRPLSKT 133
Score = 59.3 bits (137), Expect = 5e-08
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = +3
Query: 126 GFKTPREAIXGTYIDKKCPFTGNVSIRCRILTGVVQKMKMQRT 254
GFK P A YIDKKCPFTG+V++R R+ GVV+KMK ++T
Sbjct: 38 GFKAPETAYTRQYIDKKCPFTGDVNVRGRLFKGVVKKMKAEKT 80
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 62.5 bits (145), Expect = 5e-09
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +2
Query: 320 NMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 418
NMS+H S CFRDV IG IVT+GEC+PLSKTVRF
Sbjct: 34 NMSIHFSTCFRDVHIGHIVTVGECQPLSKTVRF 66
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 61.7 bits (143), Expect = 9e-09
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +2
Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 418
VI+ ++LHY PKY R+ ++ RN+ HL C + V +GD V IGE RPL+K + F
Sbjct: 77 VIQHEWLHYSPKYKRYIRKRRNIHAHLPSCIK-VNVGDYVVIGETRPLAKFISF 129
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 58.8 bits (136), Expect = 6e-08
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +2
Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 418
V++ YL+Y KYNR+E+R + + HL C V+ GD+V IGE P+SKTV+F
Sbjct: 54 VVQHVYLYYDKKYNRYERRSKKIHAHLPDCI-SVKEGDVVVIGETMPISKTVKF 106
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 58.4 bits (135), Expect = 9e-08
Identities = 27/65 (41%), Positives = 42/65 (64%)
Frame = +2
Query: 224 RRSENEDAENFVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLS 403
++S+N+ + +IR ++LPKY R+E R ++ +L C +D++ GD V IGE RPLS
Sbjct: 38 KKSDNKTVKIEIIR---YYWLPKYERYELRRTRITAYLPECLKDIKEGDYVLIGETRPLS 94
Query: 404 KTVRF 418
KT F
Sbjct: 95 KTKHF 99
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 56.8 bits (131), Expect = 3e-07
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +2
Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 409
V+ R+Y +PKY+RF KR + H C D+ +GD VTI ECRPLSKT
Sbjct: 46 VVEREYDVKVPKYDRFMKRRSRVPAHAPDCL-DLAVGDTVTIAECRPLSKT 95
Score = 33.5 bits (73), Expect = 2.8
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 117 VGLGFKTPREAIXGTYIDKKCPFTGNVSIRCRILTGVVQKMKMQRT 254
+GL + P E T D+ CPF G +S+R + L G V M++T
Sbjct: 3 LGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKT 44
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 56.4 bits (130), Expect = 3e-07
Identities = 26/54 (48%), Positives = 33/54 (61%)
Frame = +2
Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 418
VI R Y+ + KY R+EKR + H C ++GDIVTI ECRP+SKT F
Sbjct: 48 VIERQYMKMVSKYQRYEKRRSKIHAHNPACI-SAKVGDIVTIVECRPISKTKSF 100
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 56.0 bits (129), Expect = 5e-07
Identities = 25/52 (48%), Positives = 36/52 (69%)
Frame = +2
Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTV 412
V+ ++LHY+ KYNR+E+R + M V + C +V+ GD V I E RPLSKT+
Sbjct: 50 VVIHEWLHYIRKYNRYERRRKRMRVRVPECI-EVKPGDKVIIAETRPLSKTI 100
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 54.8 bits (126), Expect = 1e-06
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = +2
Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 418
++ R+Y Y KY R+E+R + H PC D + GD V I ECRPLSKT F
Sbjct: 54 IVEREYYRYDRKYERWERRRSRIPAHNPPCI-DAQEGDKVRIAECRPLSKTKSF 106
Score = 43.6 bits (98), Expect = 0.003
Identities = 23/51 (45%), Positives = 28/51 (54%)
Frame = +3
Query: 102 RYHKDVGLGFKTPREAIXGTYIDKKCPFTGNVSIRCRILTGVVQKMKMQRT 254
R KD+GLG K PR D CPF GN+ +R IL GVV +M +T
Sbjct: 6 RMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKT 52
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 49.2 bits (112), Expect = 5e-05
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +2
Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 418
V+ R+Y Y+PKY R + + VH+ C + ++ GD V ECR L+KT+ F
Sbjct: 49 VVAREYQQYIPKYERKATKIKKYHVHVPDCIK-IKPGDTVRFAECRKLAKTISF 101
Score = 33.5 bits (73), Expect = 2.8
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 105 YHKDVGLGFKTPREAIXGTYIDKKCPFTGNVSIRCRILTGVVQKMKMQRTS 257
Y +++GL K P D CP+ G +S+R ++LTG V M +++
Sbjct: 2 YTRNIGLDVKLPESECN----DPHCPYHGKLSVRGQVLTGKVVSANMTKSA 48
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 48.4 bits (110), Expect = 9e-05
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 221 RRRSENEDAENFVIR-RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRP 397
R R E N + +YL+Y KY R+E R + V + PC V+ GD V + E RP
Sbjct: 38 RLRVEKVKMHNVAVAVHEYLYYNEKYKRYEVRRKKKHVRVPPCI-PVKPGDEVIVAETRP 96
Query: 398 LSKTVRF 418
L+K+V F
Sbjct: 97 LAKSVSF 103
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 42.7 bits (96), Expect = 0.005
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +2
Query: 248 ENFVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 418
+N V++R + KY R ++ + + PC + +IGDI+TI ECRPL+K F
Sbjct: 45 KNIVMKRYREKWSYKYQRKQRVSSKIHAYSPPCM-EAKIGDIITIAECRPLNKGSSF 100
Score = 34.7 bits (76), Expect = 1.2
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 111 KDVGL-GFKTPREAIXGTYIDKKCPFTGNVSIRCRILTGVVQKMKMQR 251
+D+G+ G K P E D +CPF G +S+R +IL G+V KM +
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTK 45
>UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa sp.
PS|Rep: Ribosomal protein S17 - Beggiatoa sp. PS
Length = 100
Score = 40.3 bits (90), Expect = 0.024
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +2
Query: 287 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 409
PKY ++ KR + VH ++GDIV I +CRP+SKT
Sbjct: 47 PKYGKYIKRSTKLHVHDEE--NTCQVGDIVAISQCRPISKT 85
>UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2;
Bacteria|Rep: 30S ribosomal protein S17 - Petrotoga
mobilis SJ95
Length = 110
Score = 37.9 bits (84), Expect = 0.13
Identities = 22/57 (38%), Positives = 29/57 (50%)
Frame = +2
Query: 248 ENFVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 418
+ + D L PKY++F ++ R H + EIGDIV I E R LSKT F
Sbjct: 17 KTITVETDRLTKHPKYHKFVRKTRRYHAHDEN--NECEIGDIVEIEESRKLSKTKAF 71
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 37.9 bits (84), Expect = 0.13
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = -2
Query: 433 NFQNIESNCFGQRSAFADRYNITNLHVPEARRQMHGHIPVPFLEPIVFG*VVKVIAADHE 254
NFQNIES+ F S + NIT + E+ R + +I V F ++F V++VI++D++
Sbjct: 61 NFQNIESDSFRNWSTLTNGDNITFFN-SESWRDVGSNILVSFFVSVIFWNVMQVISSDND 119
Score = 31.9 bits (69), Expect = 8.5
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 248 LHLHFLNDAGEDAAADRNVTSEGTLLVNVGTXNRLTGSLET 126
+H N G+D +D N TSE T VNV T N ET
Sbjct: 122 VHFGGNNSTGQDFTSDGNSTSEWTFFVNVRTFNGSFWGFET 162
>UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14;
Campylobacterales|Rep: 30S ribosomal protein S17 -
Campylobacter jejuni
Length = 83
Score = 37.9 bits (84), Expect = 0.13
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +2
Query: 239 EDAENFVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 418
E + ++ R +H P+Y + KR + +H +V++GD V ECRPLSK F
Sbjct: 17 EKTASVLVERKVVH--PRYRKIVKRFKKYLIHDER--NEVKVGDTVVAVECRPLSKRKSF 72
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 37.5 bits (83), Expect = 0.17
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 418
VI ++ Y K+ R+ + + H+ P DV GD V ECRP++K+V F
Sbjct: 50 VIEKESPVYFTKFKRYARGRSRIHAHV-PSNIDVREGDRVLAAECRPVAKSVSF 102
>UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11;
Epsilonproteobacteria|Rep: 30S ribosomal protein S17 -
Wolinella succinogenes
Length = 88
Score = 35.9 bits (79), Expect = 0.52
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 287 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 421
PKY + KR + VH V++GD++ ECRPLSK F+
Sbjct: 35 PKYRKIVKRFKKYIVHDES--NAVKVGDMIEAIECRPLSKRKSFS 77
>UniRef50_A1UB26 Cluster: Putative uncharacterized protein; n=3;
Mycobacterium|Rep: Putative uncharacterized protein -
Mycobacterium sp. (strain KMS)
Length = 2125
Score = 35.1 bits (77), Expect = 0.91
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 57 NRKRGIGVKRSRKPLRYHKDVGLGFKTPREAIXGTYIDKKCPFTGN 194
+RKR I + P Y +D G GF PRE GT++ +CP G+
Sbjct: 2005 DRKRAI---LRQVPAEYKRDDGEGFYWPREIDPGTWLSVRCPVEGS 2047
>UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Thermotoga
maritima
Length = 107
Score = 34.7 bits (76), Expect = 1.2
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 287 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 418
P Y ++ KR + H + +IGD+V I E RPLSKT R+
Sbjct: 30 PLYKKYVKRTKKYHAHDER--NECKIGDVVEIEETRPLSKTKRW 71
>UniRef50_Q14591-2 Cluster: Isoform 2 of Q14591 ; n=2; Homo
sapiens|Rep: Isoform 2 of Q14591 - Homo sapiens (Human)
Length = 423
Score = 34.3 bits (75), Expect = 1.6
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = -2
Query: 205 RIETL-PVKGHFLSM*VPSIASRGVLKPRPTSLWYLNGFLLRFTPIPLLRFRK 50
RI+TL ++G L ++ S G L R SL+Y+ GF+L PIP++ K
Sbjct: 37 RIQTLLNIEGSTLERNPINVMSVGKLLIRAQSLFYIRGFILERNPIPVINVAK 89
>UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S17 -
Mycoplasma hyopneumoniae (strain 232)
Length = 98
Score = 33.9 bits (74), Expect = 2.1
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2
Query: 299 RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 418
RF+KR + + H E+GD V I ECRP+SKT F
Sbjct: 50 RFKKR-KKFNTHDEKNL--AEVGDFVKIAECRPISKTKHF 86
>UniRef50_A3BRD0 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 673
Score = 33.5 bits (73), Expect = 2.8
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +2
Query: 233 ENEDAENFVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTV 412
E ED E++V+R +++ PK + M L PC+R E+ +I +PLS V
Sbjct: 106 EVEDEEDYVLREIDVYFTPKPFDEDTMLYVMQYPLRPCWRPYELNEICKEVRVKPLSSKV 165
>UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983;
n=1; Thermoplasma acidophilum|Rep: Putative
uncharacterized protein Ta0983 - Thermoplasma
acidophilum
Length = 322
Score = 33.5 bits (73), Expect = 2.8
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2
Query: 260 IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 388
IRRD L+ + +YNR R + + P F IG+IV IGE
Sbjct: 182 IRRDDLNRIDRYNRIRITGRR--IRMKPLFEVASIGNIVGIGE 222
>UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1;
Thiomicrospira crunogena XCL-2|Rep: 30S ribosomal
protein S17 - Thiomicrospira crunogena (strain XCL-2)
Length = 87
Score = 32.7 bits (71), Expect = 4.8
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 230 SENEDAENFVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSK 406
S D V+ Y+ + PKY +F ++ + H + +GD VTI EC P SK
Sbjct: 17 SNGMDKSVVVMTNRYIKH-PKYKKFVRKSTKVMAHDAD--NACGVGDRVTISECTPFSK 72
>UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Blochmannia floridanus
Length = 85
Score = 32.7 bits (71), Expect = 4.8
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2
Query: 293 YNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 409
Y +F R + VH + +V GDIV I ECRP+SKT
Sbjct: 34 YKKFINRTTKIYVHDTNNISNV--GDIVEITECRPISKT 70
>UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12;
Bacteria|Rep: 30S ribosomal protein S17 - Bdellovibrio
bacteriovorus
Length = 89
Score = 32.3 bits (70), Expect = 6.4
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 290 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 418
KY ++ K+ H +IGDIV I E RPLSKT R+
Sbjct: 38 KYGKYVKKTSVFKAHDEK--NQAKIGDIVKIRETRPLSKTKRW 78
>UniRef50_UPI0000DB6FFA Cluster: PREDICTED: similar to Papilin
CG33103-PB, isoform B isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to Papilin CG33103-PB,
isoform B isoform 1 - Apis mellifera
Length = 2807
Score = 31.9 bits (69), Expect = 8.5
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 275 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 400
L+ +P+ RF RH+ M + +PC +VE D+ G+C P+
Sbjct: 140 LNCMPRGERFFYRHKLMVIDGTPC--EVEKNDVCVGGKCMPV 179
>UniRef50_UPI0000D5619C Cluster: PREDICTED: similar to CG3077-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG3077-PA - Tribolium castaneum
Length = 262
Score = 31.9 bits (69), Expect = 8.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 221 RRRSENEDAENFVIRRDYLHYLPKYNRFEKRHRNMSVHLS 340
R S N+D V+ R Y H+L Y+ +K H N+ +++
Sbjct: 38 RHISGNDDLSPSVVERRYTHFLNLYSALKKEHPNLMTNVT 77
>UniRef50_UPI0000498B81 Cluster: conserved hypothetical protein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 460
Score = 31.9 bits (69), Expect = 8.5
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 501 FFYLRHKFIKNFLKDFFEPLPFETFKTLNLTVLDK 397
F + K I+ FLK+F E FE FKT L +DK
Sbjct: 417 FVQSQKKDIQPFLKEFVETQMFENFKTKQLVEIDK 451
>UniRef50_Q9BTT3 Cluster: LAMA5 protein; n=1; Homo sapiens|Rep:
LAMA5 protein - Homo sapiens (Human)
Length = 670
Score = 31.9 bits (69), Expect = 8.5
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 145 SRGVLKPRPTS-LWYLNGFLLRFTPIPLLRFRKTVGC 38
+ G+L RP ++Y+ G+ FTP PLLRF GC
Sbjct: 69 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 105
>UniRef50_O15230 Cluster: Laminin subunit alpha-5 precursor; n=16;
Amniota|Rep: Laminin subunit alpha-5 precursor - Homo
sapiens (Human)
Length = 3695
Score = 31.9 bits (69), Expect = 8.5
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 145 SRGVLKPRPTS-LWYLNGFLLRFTPIPLLRFRKTVGC 38
+ G+L RP ++Y+ G+ FTP PLLRF GC
Sbjct: 2863 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 2899
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,458,954
Number of Sequences: 1657284
Number of extensions: 9246343
Number of successful extensions: 23134
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 22466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23111
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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