Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00210X
         (503 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC...   114   7e-26
AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA...   114   7e-26
AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB...   107   1e-23
AE014298-1252|AAF46429.1|  171|Drosophila melanogaster CG12662-P...    30   2.0  

>AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC,
           isoform C protein.
          Length = 155

 Score =  114 bits (274), Expect = 7e-26
 Identities = 59/83 (71%), Positives = 67/83 (80%)
 Frame = +3

Query: 6   MADQTERSFQKQPTVFLNRKRGIGVKRSRKPLRYHKDVGLGFKTPREAIXGTYIDKKCPF 185
           MADQ ER+FQKQ  V LNRK   G+ + +K LR  +DVGLGFKTPREAI GTYIDKKCP+
Sbjct: 1   MADQNERAFQKQFGVNLNRKVKPGITK-KKLLRRSRDVGLGFKTPREAIDGTYIDKKCPW 59

Query: 186 TGNVSIRCRILTGVVQKMKMQRT 254
           TG+V IR RILTGVV+K KMQRT
Sbjct: 60  TGDVRIRGRILTGVVRKAKMQRT 82



 Score =  107 bits (256), Expect = 1e-23
 Identities = 48/55 (87%), Positives = 51/55 (92%)
 Frame = +2

Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 421
           VIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFN
Sbjct: 84  VIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFN 138


>AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA,
           isoform A protein.
          Length = 155

 Score =  114 bits (274), Expect = 7e-26
 Identities = 59/83 (71%), Positives = 67/83 (80%)
 Frame = +3

Query: 6   MADQTERSFQKQPTVFLNRKRGIGVKRSRKPLRYHKDVGLGFKTPREAIXGTYIDKKCPF 185
           MADQ ER+FQKQ  V LNRK   G+ + +K LR  +DVGLGFKTPREAI GTYIDKKCP+
Sbjct: 1   MADQNERAFQKQFGVNLNRKVKPGITK-KKLLRRSRDVGLGFKTPREAIDGTYIDKKCPW 59

Query: 186 TGNVSIRCRILTGVVQKMKMQRT 254
           TG+V IR RILTGVV+K KMQRT
Sbjct: 60  TGDVRIRGRILTGVVRKAKMQRT 82



 Score =  107 bits (256), Expect = 1e-23
 Identities = 48/55 (87%), Positives = 51/55 (92%)
 Frame = +2

Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 421
           VIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFN
Sbjct: 84  VIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFN 138


>AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB,
           isoform B protein.
          Length = 154

 Score =  107 bits (256), Expect = 1e-23
 Identities = 48/55 (87%), Positives = 51/55 (92%)
 Frame = +2

Query: 257 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 421
           VIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFN
Sbjct: 83  VIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFN 137



 Score =   99 bits (238), Expect = 2e-21
 Identities = 51/84 (60%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
 Frame = +3

Query: 6   MADQ-TERSFQKQPTVFLNRKRGIGVKRSRKPLRYHKDVGLGFKTPREAIXGTYIDKKCP 182
           MADQ TERSF+KQ  V + R++   +K+  +P R+++ +GLGF+ P EAI GTYIDKKCP
Sbjct: 1   MADQQTERSFRKQHAVVVVRRKSPNLKK--RP-RFYRQIGLGFRAPAEAIDGTYIDKKCP 57

Query: 183 FTGNVSIRCRILTGVVQKMKMQRT 254
           +TG+V IR RILTGVV+K KMQRT
Sbjct: 58  WTGDVRIRGRILTGVVRKAKMQRT 81


>AE014298-1252|AAF46429.1|  171|Drosophila melanogaster CG12662-PA
           protein.
          Length = 171

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +3

Query: 192 NVSIRCRILTGVVQKMKMQRTS*SAAITFTTYPNTIGSRNGT 317
           N+S+ C + TGV    ++Q    +A + F  +PNT+ +  GT
Sbjct: 102 NMSLACPLKTGVYVMNRIQVPPETALLKFMYHPNTLYTLEGT 143


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,984,751
Number of Sequences: 53049
Number of extensions: 447719
Number of successful extensions: 1281
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1278
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)