Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00209
(748 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 147 2e-34
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 124 2e-27
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 123 5e-27
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 118 1e-25
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 116 8e-25
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 113 4e-24
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 105 2e-21
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 100 3e-20
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 100 4e-20
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 99 1e-19
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 99 1e-19
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 99 1e-19
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 99 1e-19
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 95 2e-18
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 94 3e-18
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 90 5e-17
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 89 1e-16
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 85 2e-15
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 82 1e-14
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 79 1e-13
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 78 2e-13
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 75 2e-12
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 71 4e-11
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 69 2e-10
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 65 2e-09
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 64 3e-09
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 63 8e-09
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 60 6e-08
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 60 6e-08
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 54 3e-06
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 53 9e-06
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.021
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 40 0.065
UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 38 0.35
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.1
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 35 1.8
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 2.4
UniRef50_A2DPP4 Cluster: Phosphatidylinositol 3-and 4-kinase fam... 35 2.4
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 35 2.4
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 34 4.3
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 5.6
UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;... 33 5.6
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.6
UniRef50_Q0FF01 Cluster: Probable fatty acid desaturase protein;... 33 7.5
UniRef50_UPI0000F2E6E2 Cluster: PREDICTED: hypothetical protein;... 33 9.9
UniRef50_P73828 Cluster: Sensor protein; n=1; Synechocystis sp. ... 33 9.9
UniRef50_A5UPY3 Cluster: HAD-superfamily hydrolase, subfamily IA... 33 9.9
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.9
UniRef50_P14653 Cluster: Homeobox protein Hox-B1; n=29; Euteleos... 33 9.9
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 147 bits (357), Expect = 2e-34
Identities = 66/79 (83%), Positives = 76/79 (96%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 689
+ + E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKSQRLRAGKGKMRNRRR+ R
Sbjct: 10 DNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRLHR 69
Query: 690 KGPLIIFNKDQGLTRAFRN 746
KGPLII+NKDQGLTR+FRN
Sbjct: 70 KGPLIIYNKDQGLTRSFRN 88
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 124 bits (300), Expect = 2e-27
Identities = 56/92 (60%), Positives = 60/92 (65%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 435
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 436 XXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
++GH ++ P P
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELP 151
Score = 124 bits (300), Expect = 2e-27
Identities = 55/79 (69%), Positives = 69/79 (87%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 689
E++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR
Sbjct: 145 EEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQR 204
Query: 690 KGPLIIFNKDQGLTRAFRN 746
+GP II+N+D G+ +AFRN
Sbjct: 205 RGPCIIYNEDNGIIKAFRN 223
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/59 (61%), Positives = 45/59 (76%)
Frame = +2
Query: 77 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 123 bits (296), Expect = 5e-27
Identities = 59/103 (57%), Positives = 66/103 (64%)
Frame = +1
Query: 223 EAALLREQGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 402
+A + E G HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +
Sbjct: 53 QAYAVSELAG-HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTF 111
Query: 403 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
RRWH Q++GH++ FP
Sbjct: 112 RRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFP 154
Score = 121 bits (292), Expect = 2e-26
Identities = 53/77 (68%), Positives = 68/77 (88%)
Frame = +3
Query: 516 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 695
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+G
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRG 209
Query: 696 PLIIFNKDQGLTRAFRN 746
PL++++KD+GL +AFRN
Sbjct: 210 PLVVYDKDEGLRKAFRN 226
Score = 72.5 bits (170), Expect = 1e-11
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +2
Query: 71 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 250
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 251 A 253
A
Sbjct: 61 A 61
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 118 bits (285), Expect = 1e-25
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 414
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 177 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +2
Query: 104 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EA
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEA 175
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 116 bits (278), Expect = 8e-25
Identities = 53/92 (57%), Positives = 56/92 (60%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 435
HQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 36 HQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLNQ 95
Query: 436 XXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
ARGH + P P
Sbjct: 96 KRFATASALAASGSPALLMARGHNVSTVPEVP 127
Score = 71.7 bits (168), Expect = 2e-11
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 6/83 (7%)
Frame = +3
Query: 516 IPELPLVVADKV---QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 686
+PE+PLV++ I KT AV L+ + A +D K S++LRAGKGK+R RR Q
Sbjct: 123 VPEVPLVISSTAFADAAIRKTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQ 182
Query: 687 RKGPLIIFNKDQG---LTRAFRN 746
R+GPL+I+N D+ L +AFRN
Sbjct: 183 RRGPLVIYNPDEDGKELVKAFRN 205
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 113 bits (272), Expect = 4e-24
Identities = 49/58 (84%), Positives = 52/58 (89%)
Frame = +1
Query: 241 EQGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 414
E+ G HQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 55 EKAG-HQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 111
Score = 64.1 bits (149), Expect = 3e-09
Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 6/84 (7%)
Frame = +3
Query: 513 KIPELPLVVADKVQE---INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRI 683
++ E+PLV+ +V E I +T A L+ + A D+ KV S++LRAGKGK+R RR
Sbjct: 145 EVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGKLRGRRHR 204
Query: 684 QRKGPLIIFN---KDQGLTRAFRN 746
QR+GPL++++ + L RAFRN
Sbjct: 205 QRRGPLVVYDGATDGKELVRAFRN 228
Score = 63.3 bits (147), Expect = 6e-09
Identities = 31/56 (55%), Positives = 37/56 (66%)
Frame = +2
Query: 86 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++A
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKA 57
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 105 bits (251), Expect = 2e-21
Identities = 45/55 (81%), Positives = 48/55 (87%)
Frame = +1
Query: 247 GGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 411
G ++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRW 111
Score = 69.7 bits (163), Expect = 7e-11
Identities = 33/77 (42%), Positives = 51/77 (66%)
Frame = +3
Query: 516 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 695
+ E+PLV ++ ++ + KTK A+ FL L ++ ++ KS +LRA GKMRNR+ G
Sbjct: 147 LKEVPLVASNDIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNRKYKISNG 206
Query: 696 PLIIFNKDQGLTRAFRN 746
PLII++ D G+ +AFRN
Sbjct: 207 PLIIYSXDSGIKKAFRN 223
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +2
Query: 77 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 241
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAV 54
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 100 bits (240), Expect = 3e-20
Identities = 51/103 (49%), Positives = 55/103 (53%)
Frame = +1
Query: 223 EAALLREQGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 402
+A + Q G Q SAESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K W
Sbjct: 51 QAHAVNPQAGM-QHSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVW 109
Query: 403 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
RRWH ARGH + + P P
Sbjct: 110 RRWHRRVNIKQKRHAAATAVAATGIVPLVLARGHRISQVPQIP 152
Score = 73.3 bits (172), Expect = 6e-12
Identities = 34/79 (43%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +3
Query: 513 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 692
++P++PLVV DK++ KT A+ FL+R A+ D+ KV ++ +RAG K R ++ RK
Sbjct: 147 QVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKVVRAGISKQRGKKYRVRK 206
Query: 693 GPLII-FNKDQGLTRAFRN 746
GPL++ FN++ L +AFRN
Sbjct: 207 GPLVVYFNENAKLLKAFRN 225
Score = 54.4 bits (125), Expect = 3e-06
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +2
Query: 92 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +A
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQA 59
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 100 bits (239), Expect = 4e-20
Identities = 48/92 (52%), Positives = 52/92 (56%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 435
HQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 61 HQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTE 120
Query: 436 XXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
ARGH + P P
Sbjct: 121 KRHAVAAAIAATGCPSLVMARGHRINNVPELP 152
Score = 77.0 bits (181), Expect = 5e-13
Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Frame = +3
Query: 516 IPELPLVVADKVQEINKTKQAVIFLRRL-KAWSDILK-VYKSQRLRAGKGKMRNRRRIQR 689
+PELPLV+++++Q INKT AV F + K + +K + S +R GKGKMRNRRR+
Sbjct: 148 VPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNRRRVCA 207
Query: 690 KGPLIIFNKDQGLTRAFRN 746
GPL+++ +D G+ +A RN
Sbjct: 208 VGPLVVYAEDNGIVKAMRN 226
Score = 56.4 bits (130), Expect = 7e-07
Identities = 28/59 (47%), Positives = 38/59 (64%)
Frame = +2
Query: 77 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +A
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKA 59
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 99.1 bits (236), Expect = 1e-19
Identities = 43/92 (46%), Positives = 52/92 (56%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 435
+QTSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 59 YQTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKE 118
Query: 436 XXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
+RGH ++ P P
Sbjct: 119 KRLALAVSVAATASVPLVMSRGHRVESVPELP 150
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +2
Query: 83 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 247
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISR 55
Score = 39.9 bits (89), Expect = 0.065
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 689
E +PELPLV+ D ++ + KT+ AV L + ++ +V ++R + KGK R
Sbjct: 144 ESVPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRVSVTKRTKR-KGKKR------P 196
Query: 690 KGPLIIFNKD--QGLTRAFRN 746
GPL++ +G RAFRN
Sbjct: 197 VGPLVVMRSTAVEG-KRAFRN 216
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 99.1 bits (236), Expect = 1e-19
Identities = 47/89 (52%), Positives = 51/89 (57%)
Frame = +1
Query: 265 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 444
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRF 121
Query: 445 XXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
+RGH + P P
Sbjct: 122 AVVSALAASSVPSLVMSRGHQIGNVPEVP 150
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/77 (49%), Positives = 57/77 (74%)
Frame = +3
Query: 516 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 695
+PE+PLVV D +Q KTK+A+ FL+ + A D+ +V S+ +RAG+GKMRNRR + R+G
Sbjct: 146 VPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNRRYVARRG 205
Query: 696 PLIIFNKDQGLTRAFRN 746
P+++ ++G TRAFRN
Sbjct: 206 PMLVMPNNKG-TRAFRN 221
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = +2
Query: 86 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 247
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNR 55
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 98.7 bits (235), Expect = 1e-19
Identities = 44/79 (55%), Positives = 62/79 (78%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 689
E +PE+PLVV D I KT +AV L++L A++DI KV S+ +R+GKGKMRNRR +QR
Sbjct: 148 EGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNVRSGKGKMRNRRYVQR 207
Query: 690 KGPLIIFNKDQGLTRAFRN 746
+GPL+++++D G+TRAFRN
Sbjct: 208 RGPLVVYSEDNGVTRAFRN 226
Score = 35.9 bits (79), Expect = 1.1
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 134 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 220
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 98.7 bits (235), Expect = 1e-19
Identities = 38/53 (71%), Positives = 46/53 (86%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 414
+QTSA SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 59 YQTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWH 111
Score = 50.0 bits (114), Expect = 6e-05
Identities = 28/53 (52%), Positives = 33/53 (62%)
Frame = +2
Query: 89 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 247
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSK 55
Score = 43.2 bits (97), Expect = 0.007
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 689
E + E+P+VV D +++INKTK AV L + +++ ++ K G+ R+ R+ +
Sbjct: 144 EALREVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRIDKV------TGRARDGRKKRP 197
Query: 690 KGPLIIFNKD--QGLTRAFRN 746
GPLII +G RAFRN
Sbjct: 198 VGPLIILRATAVEG-KRAFRN 217
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 95.1 bits (226), Expect = 2e-18
Identities = 43/92 (46%), Positives = 52/92 (56%)
Frame = +1
Query: 262 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 441
TSA SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 57 TSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRK 116
Query: 442 XXXXXXXXXXXXXXXXQARGHIMKRFPSFPWL 537
+RG+ +K P P++
Sbjct: 117 SAIFSAIASSSIVSIIVSRGYRVKTIPEIPFV 148
Score = 56.0 bits (129), Expect = 9e-07
Identities = 28/77 (36%), Positives = 46/77 (59%)
Frame = +3
Query: 516 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 695
IPE+P V+ D +++I KT+ + L L + I++ ++L++GKGKMRNRR + G
Sbjct: 142 IPEIPFVIEDSIEKIPKTRDLIKILTTLGI-NSIVRNKLKRKLKSGKGKMRNRRFKKPTG 200
Query: 696 PLIIFNKDQGLTRAFRN 746
PL++F + R N
Sbjct: 201 PLLVFKNNLKSLRNIAN 217
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 94.3 bits (224), Expect = 3e-18
Identities = 43/92 (46%), Positives = 49/92 (53%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 435
HQ SAESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 60 HQHSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQ 119
Query: 436 XXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
ARGH + P P
Sbjct: 120 RRFAMCSAIAASSNPSLVLARGHKIDNVPELP 151
Score = 87.4 bits (207), Expect = 3e-16
Identities = 41/79 (51%), Positives = 57/79 (72%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 689
+ +PELPLVV+D V++I KTK+AV L LKA D+ +S+R+R G GK RNRR QR
Sbjct: 145 DNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNRRYTQR 204
Query: 690 KGPLIIFNKDQGLTRAFRN 746
+G LI+ ++++GL AFRN
Sbjct: 205 RGVLIVHDQNEGLANAFRN 223
Score = 38.7 bits (86), Expect = 0.15
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +2
Query: 95 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 235
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPF 52
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 90.2 bits (214), Expect = 5e-17
Identities = 40/64 (62%), Positives = 52/64 (81%)
Frame = +3
Query: 546 KVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 725
KV+ KTK+ V+ L++LKAW+DI KVY SQR+RAGKGKMRNRR IQR+G II+N+D G
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNG 157
Query: 726 LTRA 737
+ +A
Sbjct: 158 IIKA 161
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = +1
Query: 199 SRFYVQELEAALLREQGGCHQTSAESWGTGRAVARIPRVRGGG 327
S + + + + E G +QTSAESWGTGRA +PRVRGGG
Sbjct: 32 SNLHKNDSQPYAVSESAG-YQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 89.0 bits (211), Expect = 1e-16
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = +1
Query: 259 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 411
Q SAESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 58 QHSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRW 108
Score = 67.3 bits (157), Expect = 4e-10
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = +3
Query: 525 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLI 704
LP++V+D + + KTK AV LR L ++ +V KS+ +R GKGKMRNRR QRKG LI
Sbjct: 147 LPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRNRRYTQRKGILI 206
Query: 705 IFNKDQGLTRAFRN 746
+ + + FRN
Sbjct: 207 VHGESSEML-GFRN 219
Score = 36.7 bits (81), Expect = 0.61
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +2
Query: 98 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
++ Y TV+ LP VF PIR DLV + +RQPY VSK A
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNA 55
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 84.6 bits (200), Expect = 2e-15
Identities = 41/83 (49%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Frame = +3
Query: 504 HYEKIPELPLVVADK-VQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRR 680
H +P++PLVV K + I KTKQAV L+++ A+SD+LKV S+ +RAG+GKMR R+
Sbjct: 143 HIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRKI 202
Query: 681 IQRKGPLIIF-NKDQGLTRAFRN 746
+RKGPL+++ N D +AFRN
Sbjct: 203 KERKGPLVVYGNDDLQAVKAFRN 225
Score = 83.8 bits (198), Expect = 4e-15
Identities = 43/98 (43%), Positives = 52/98 (53%)
Frame = +1
Query: 259 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 438
Q SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 61 QHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMR 120
Query: 439 XXXXXXXXXXXXXXXXXQARGHIMKRFPSFPWL*PTKS 552
ARGH + P P + +KS
Sbjct: 121 RFAVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKS 158
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +2
Query: 86 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +A
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKA 58
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/53 (67%), Positives = 46/53 (86%)
Frame = +3
Query: 513 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 671
++PELPLVV DKV+ KT++AV+ L++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 9 EVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 689
E +PELPLV+ D + + KT A+ L++ A+ D K S + GKGKMRNRR I R
Sbjct: 8 ESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRNRRYISR 67
Query: 690 KGPLIIFNKDQG-LTRAFRN 746
KGPLI++ + L +AFRN
Sbjct: 68 KGPLIVYGMEGAKLVKAFRN 87
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 78.2 bits (184), Expect = 2e-13
Identities = 35/94 (37%), Positives = 50/94 (53%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 435
+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 61 NQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNRKV 120
Query: 436 XXXXXXXXXXXXXXXXXXQARGHIMKRFPSFPWL 537
+RGH +K +FP +
Sbjct: 121 KVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMI 154
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/78 (41%), Positives = 52/78 (66%)
Frame = +3
Query: 513 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 692
++ E+P+VV D VQEI +T+ AV L+++ + D+ +V R+ KGK R +K
Sbjct: 143 EVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFRRAAYKTKK 202
Query: 693 GPLIIFNKDQGLTRAFRN 746
GPL+I+N+D+G+ +AFRN
Sbjct: 203 GPLVIYNEDKGIVKAFRN 220
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/91 (39%), Positives = 44/91 (48%)
Frame = +1
Query: 259 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 438
+ SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 58 KVSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQR 117
Query: 439 XXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
QARGH++ P
Sbjct: 118 KFAIASAIAATAVVPLVQARGHVLGEVKEVP 148
Score = 38.7 bits (86), Expect = 0.15
Identities = 17/51 (33%), Positives = 36/51 (70%)
Frame = +2
Query: 83 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 235
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPH 49
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 70.5 bits (165), Expect = 4e-11
Identities = 28/79 (35%), Positives = 52/79 (65%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 689
+ +P LP+VV D+++ +NK ++ F + + W+D+ + ++R+RAGKGK R RR ++
Sbjct: 139 DDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGRRYVKP 198
Query: 690 KGPLIIFNKDQGLTRAFRN 746
K LI+ ++D+G+ RN
Sbjct: 199 KSVLIVVDEDEGIKLGARN 217
Score = 43.6 bits (98), Expect = 0.005
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +1
Query: 259 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXX 435
+TSAESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 55 RTSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKE 113
Query: 436 XXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
+ RGH++ P P
Sbjct: 114 RRAALRSALAATAKPEFVKERGHVIDDVPHLP 145
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/77 (42%), Positives = 49/77 (63%)
Frame = +3
Query: 516 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 695
+P +PLVV + KTK A+ ++ + D+ + S+ +RAG+GKMRNRR I RKG
Sbjct: 137 VPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMRNRRYITRKG 194
Query: 696 PLIIFNKDQGLTRAFRN 746
PL+I+N + + R FRN
Sbjct: 195 PLVIYNTED-VARGFRN 210
Score = 57.2 bits (132), Expect = 4e-07
Identities = 36/103 (34%), Positives = 44/103 (42%)
Frame = +1
Query: 259 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 438
Q +A SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 57 QCTAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQR 110
Query: 439 XXXXXXXXXXXXXXXXXQARGHIMKRFPSFPWL*PTKSRRSTR 567
+ARGH + PS P + T + T+
Sbjct: 111 RYAVASALAASANAALVEARGHRIADVPSIPLVVDTDNVTKTK 153
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/54 (42%), Positives = 29/54 (53%)
Frame = +2
Query: 92 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ A
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYA 54
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = +3
Query: 537 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FN 713
V DK++ KTK A+ FL+R A+ D+ KV ++ +RAG K R ++ RKGPL++ FN
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFN 60
Query: 714 KDQGLTRAFRN 746
++ L +AFRN
Sbjct: 61 ENAKLLKAFRN 71
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 64.5 bits (150), Expect = 3e-09
Identities = 26/75 (34%), Positives = 49/75 (65%)
Frame = +3
Query: 522 ELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPL 701
ELP VV+++++ + +TK R + ++D+ + + +R RAG+GKMR RR +++K L
Sbjct: 136 ELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRRYVKKKSVL 195
Query: 702 IIFNKDQGLTRAFRN 746
++ KD G+ +A +N
Sbjct: 196 LVVGKDDGVVKAAKN 210
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 62.9 bits (146), Expect = 8e-09
Identities = 32/75 (42%), Positives = 47/75 (62%)
Frame = +3
Query: 522 ELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPL 701
+LP+VV D V+ INKTK A+ L+ L + DI + + + +RAG+GKMR RR Q K L
Sbjct: 140 KLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGRRYKQPKSVL 199
Query: 702 IIFNKDQGLTRAFRN 746
I+ + +AFR+
Sbjct: 200 IVARNSSAM-KAFRS 213
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 60.1 bits (139), Expect = 6e-08
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 689
EK+P LP+VV ++IN+ K+A L W D+ + + ++RAGKGKMR RR +
Sbjct: 162 EKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRRYKEP 221
Query: 690 KGPLIIFNK-DQGLTRAFRN 746
K L++ + + L A RN
Sbjct: 222 KSVLVVVSDLNAPLIAAVRN 241
Score = 46.8 bits (106), Expect = 6e-04
Identities = 29/96 (30%), Positives = 40/96 (41%)
Frame = +1
Query: 244 QGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXX 423
+G + S ES+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEI 132
Query: 424 XXXXXXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
ARGH++++ PS P
Sbjct: 133 NKKEKKLAIRSAIAATAYRSWVAARGHVVEKVPSLP 168
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 60.1 bits (139), Expect = 6e-08
Identities = 23/78 (29%), Positives = 48/78 (61%)
Frame = +3
Query: 513 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 692
++ ++P V+ D+++ + TK+ + L DI++ K +++++GKGK+R R+ K
Sbjct: 136 ELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKGKLRGRKYRTPK 195
Query: 693 GPLIIFNKDQGLTRAFRN 746
GPL++ D+G++ RN
Sbjct: 196 GPLVVVGNDRGISLGARN 213
Score = 35.5 bits (78), Expect = 1.4
Identities = 24/93 (25%), Positives = 37/93 (39%)
Frame = +1
Query: 259 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 438
+T+AES+G+GR A +PRV+G S + AF GGR P + +H
Sbjct: 56 RTTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKER 110
Query: 439 XXXXXXXXXXXXXXXXXQARGHIMKRFPSFPWL 537
+ RGH + P++
Sbjct: 111 TLAIRSAIAATANKELVEQRGHQVSELEQIPFV 143
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 54.4 bits (125), Expect = 3e-06
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +3
Query: 528 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII 707
P+VV D + + T + FL+++ + D+ +V + R+RAGKGKMR R+ + GPLII
Sbjct: 147 PIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGRKYKEPIGPLII 206
Query: 708 -FNKDQGLTRAFRN 746
+ + + +A RN
Sbjct: 207 VHDSNSPIIKAARN 220
Score = 35.1 bits (77), Expect = 1.8
Identities = 26/98 (26%), Positives = 38/98 (38%)
Frame = +1
Query: 238 REQGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHX 417
R+ +TSAES+G +AR+PRV+ SG+ A GGR+ P ++
Sbjct: 55 RDPNAGKRTSAESFGINLGMARVPRVK-----NSGEAALAPNTVGGRLAFPPSVNKKLAE 109
Query: 418 XXXXXXXXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
+ARGH+ K FP
Sbjct: 110 EANVKEKRLAVISALSATADIAFVRARGHVFKDSVRFP 147
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 52.8 bits (121), Expect = 9e-06
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = +3
Query: 534 VVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFN 713
+V D ++++ KTK+ L +L ++ +VY+ +R RAGKGK R R I+RKGPLI+ N
Sbjct: 154 IVVDGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAGKGKRRGRAYIERKGPLIVVN 212
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 41.5 bits (93), Expect = 0.021
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +3
Query: 324 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 428
W VR C+R HV WW +VR E L LAP QP
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 39.9 bits (89), Expect = 0.065
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +1
Query: 259 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 396
+TSA S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 68 RTSAVSLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
Score = 39.9 bits (89), Expect = 0.065
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 498 RTHYEKIPELPLVVADKV-QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 674
R H LP+V+ V +I+ ++A L + + D+L+ + +R AGKGKMR R
Sbjct: 142 RGHRFSAETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGKMRGR 201
Query: 675 RRIQRKGPLII 707
R K L +
Sbjct: 202 RYKVPKSVLFV 212
>UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687;
n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone
THYMU3038687 - Homo sapiens (Human)
Length = 189
Score = 37.5 bits (83), Expect = 0.35
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +3
Query: 285 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 449
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 450 GGSRCCYRRPSARS 491
G+ C P+ RS
Sbjct: 139 HGAPSCLSTPAPRS 152
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.9 bits (79), Expect = 1.1
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +1
Query: 250 GCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 375
G AE + T AR PR GGG HR GA G + RGG
Sbjct: 186 GAPHAEAEPF-TAPLRARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 35.1 bits (77), Expect = 1.8
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +1
Query: 238 REQGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 378
RE GG A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGG----GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 2.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 370 HDTCYRRHPDRTYEYHHHGHAEFGRQH 290
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_A2DPP4 Cluster: Phosphatidylinositol 3-and 4-kinase family
protein; n=1; Trichomonas vaginalis G3|Rep:
Phosphatidylinositol 3-and 4-kinase family protein -
Trichomonas vaginalis G3
Length = 2286
Score = 34.7 bits (76), Expect = 2.4
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = -3
Query: 731 SQTLILVEDYEGSLTLDTTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQE-DDSLFGLVDL 555
SQ LI+ +Y L ++ F TS+ + V LK + C Q+ + S++ ++DL
Sbjct: 1065 SQKLIIDSEYLRGKILPIAFLSCFLNTSSDQ-KEVFLKQLNDCFSLGQKINSSIYKIIDL 1123
Query: 554 LDFVGYN 534
L+ +GYN
Sbjct: 1124 LEMLGYN 1130
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 34.7 bits (76), Expect = 2.4
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +1
Query: 283 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 396
TG ARI R++GGG R G+ RGGR P K
Sbjct: 65 TGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPK 102
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 33.9 bits (74), Expect = 4.3
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -1
Query: 379 YVHHD-TCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 266
Y H+D Y +H D + HHHG +G H + +H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 33.5 bits (73), Expect = 5.6
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -1
Query: 355 RRHPDRTYEYHHHGHAEFGRQHVQ-YPMIQHWF 260
R PD + +HHHGH G HV+ YP F
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYPATDSLF 213
>UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 220
Score = 33.5 bits (73), Expect = 5.6
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 220 LEAALLREQGGCHQTSAESWGTGRAVARIPRVRGGGTHRSG 342
L A+ R GG +T+ + G G AR+P RGG RSG
Sbjct: 100 LSASSGRAAGGGRETATRAGGGGPRSARVPGCRGGARSRSG 140
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 33.5 bits (73), Expect = 5.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 382 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 266
TY+ H Y +HP T+ YHH H + ++ Q+P + H
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTH 149
>UniRef50_Q0FF01 Cluster: Probable fatty acid desaturase protein;
n=1; alpha proteobacterium HTCC2255|Rep: Probable fatty
acid desaturase protein - alpha proteobacterium HTCC2255
Length = 347
Score = 33.1 bits (72), Expect = 7.5
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -1
Query: 379 YVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDSLLAHAV 233
YV H H DR E+ H A G H P+I HWF ++ H V
Sbjct: 238 YVQHQF-EDTHWDREEEWDMHKAALEGSSHYDLPLILHWFSANIGIHHV 285
>UniRef50_UPI0000F2E6E2 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 293
Score = 32.7 bits (71), Expect = 9.9
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = +3
Query: 384 RPHEALAALAPSRQPPTAESGLGGSRCCYRRPSARSG 494
RP A AA P RQ P E GGS Y P+ RSG
Sbjct: 122 RPGPAQAARPPPRQWPCTECPGGGSGVVYHLPTERSG 158
>UniRef50_P73828 Cluster: Sensor protein; n=1; Synechocystis sp. PCC
6803|Rep: Sensor protein - Synechocystis sp. (strain PCC
6803)
Length = 1014
Score = 32.7 bits (71), Expect = 9.9
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 104 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAVTKPV 268
+Y E G P+ K+PI PD + + V + + P VS EA++ P+
Sbjct: 678 IYLSPGERYSGDKPPVQAWIKSPINPDELENTLVDVLGQTEPPTLVSTEAISGPL 732
>UniRef50_A5UPY3 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 1; n=2; Roseiflexus|Rep: HAD-superfamily
hydrolase, subfamily IA, variant 1 - Roseiflexus sp.
RS-1
Length = 223
Score = 32.7 bits (71), Expect = 9.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 158 RTGGA-WLHPAPSHSSLSTPTLKVGLPIDSFRYFSEAIPP 42
R GG WLH A SH P +++GLP+ E +PP
Sbjct: 163 RIGGLRWLHAAQSHFHDVVPAVQMGLPVAWINRKHEPLPP 202
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.7 bits (71), Expect = 9.9
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 385 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 293
R + HHD C R R ++HHHGH GR+
Sbjct: 478 RDHHHHDRCLRDR--RRRDHHHHGHRLRGRR 506
>UniRef50_P14653 Cluster: Homeobox protein Hox-B1; n=29;
Euteleostomi|Rep: Homeobox protein Hox-B1 - Homo sapiens
(Human)
Length = 301
Score = 32.7 bits (71), Expect = 9.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 524 ASPGCSRQSPGDQQDQTGCHLPEAPQGMV 610
A PGC +++ GD DQ+ C PEA V
Sbjct: 271 APPGCPKEAAGDASDQSTCTSPEASPSSV 299
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,284,908
Number of Sequences: 1657284
Number of extensions: 15816533
Number of successful extensions: 52114
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 48037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51612
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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