Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00209
(748 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 122 4e-28
07_01_0578 + 4295386-4296489,4297394-4297507 119 2e-27
10_02_0199 + 6668902-6669293,6669825-6669882 35 0.060
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 32 0.56
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 31 0.97
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 30 1.7
03_01_0520 - 3900387-3900613,3900812-3900853,3902092-3902210,390... 30 2.2
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 30 2.2
06_03_0243 + 18629793-18630047,18630362-18630442,18631911-186323... 29 3.0
11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067 29 5.2
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 29 5.2
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 29 5.2
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 29 5.2
08_02_1278 - 25838146-25839411 28 6.9
08_02_0105 + 12448808-12449152,12449218-12449409,12449520-124496... 28 6.9
10_01_0359 + 3956527-3956616,3957623-3957818,3958102-3959418,395... 28 9.1
07_01_1032 - 8947594-8947769,8947885-8948601,8948973-8949049,894... 28 9.1
05_04_0292 + 19893895-19894983 28 9.1
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 122 bits (293), Expect = 4e-28
Identities = 56/92 (60%), Positives = 60/92 (65%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 435
HQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 63 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRL 122
Query: 436 XXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
ARGH ++ P FP
Sbjct: 123 RRIAVASALAATAVPSLVLARGHRIEGVPEFP 154
Score = 83.0 bits (196), Expect = 2e-16
Identities = 39/80 (48%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 689
E +PE PLVV+D ++ I KT Q++ L+++ A++D K S +RAGKGKMRNRR I R
Sbjct: 148 EGVPEFPLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGKGKMRNRRYINR 207
Query: 690 KGPLIIFNKD-QGLTRAFRN 746
KGPLI++ + + +AFRN
Sbjct: 208 KGPLIVYGTEGSKVVKAFRN 227
Score = 52.0 bits (119), Expect = 5e-07
Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +2
Query: 80 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
+ ARPLVSV + E A +P V +APIRPD+V H +S N RQPY VS+ A
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRA 61
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 119 bits (287), Expect = 2e-27
Identities = 54/92 (58%), Positives = 59/92 (64%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 435
HQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WR+WH
Sbjct: 64 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHL 123
Query: 436 XXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
ARGH ++ P P
Sbjct: 124 RRVAVASALAATSVPSLVLARGHRIETVPELP 155
Score = 83.0 bits (196), Expect = 2e-16
Identities = 39/80 (48%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 689
E +PELPLV++D + I KT QA+ L+++ A++D K S +R GKGKMRNRR I R
Sbjct: 149 ETVPELPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRNRRYINR 208
Query: 690 KGPLIIFNKD-QGLTRAFRN 746
KGPLI++ + + +AFRN
Sbjct: 209 KGPLIVYGTEGSKIVKAFRN 228
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Frame = +2
Query: 89 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
RPLVSV + + + T ++ L VF+AP+RPD+V VH +S N RQPY VS+ A
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRA 62
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 35.1 bits (77), Expect = 0.060
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +1
Query: 238 REQGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 378
RE GG A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGG----GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +1
Query: 52 ASLK*RNESIGSPTFSVGVLREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRF 207
ASL N + P+F V L G SQA V + GAH G Q C F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 31.1 bits (67), Expect = 0.97
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 52 ASLK*RNESIGSPTFSVGVLREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRF 207
ASL N I +PTF +G L + G S + + GAH G + C F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 413 TVASTSDSGERPWRQPLLLPASQRSFRLEDTL*KDSRASPGCSRQSPGDQQDQTGCHLPE 592
T A T+ S +P R P L + R+ + L +RASP Q+PG + C L
Sbjct: 109 THAPTAPSPRQPGRLPAHLTVASRAAQPASRLRAPARASPSPDAQTPGRRSRPRRC-LAG 167
Query: 593 APQ 601
PQ
Sbjct: 168 RPQ 170
>03_01_0520 -
3900387-3900613,3900812-3900853,3902092-3902210,
3903633-3903712,3903829-3903856,3904151-3904272,
3904714-3904857,3904897-3906327
Length = 730
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 373 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 266
HH + H + YE+ + H + RQ QY QH
Sbjct: 150 HHQQYQQHHHQQQYEHQNRIHFQHHRQQQQYQQHQH 185
>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
Length = 248
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 337 TYEYHH-HGHAEFGRQHVQYPMIQHWFGDSLLAHAVGLPRVLGH 209
T+++HH HGH FGR H +P H G ++ + G P H
Sbjct: 144 THDHHHGHGHHLFGRDH--WPASHHPAG-GMVNYGGGAPYYAAH 184
>06_03_0243 +
18629793-18630047,18630362-18630442,18631911-18632305,
18632471-18632926,18633156-18633247,18633528-18633683,
18635657-18636057
Length = 611
Score = 29.5 bits (63), Expect = 3.0
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +1
Query: 130 AGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGCHQTSAESWGTGRAVARIP 309
+G ++A + + P GP ++ +++L A RE + +A + T +A +
Sbjct: 448 SGYTRAATLNLPSVIPIGPRN--TQENIKQLLAGGQRELVATGEAAATAAATAKATPPLA 505
Query: 310 R-VRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 408
R GG HR G+G G GG WRR
Sbjct: 506 RRTADGGAHR-GRGGGGAEADGGARRGRGGGWRR 538
>11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067
Length = 472
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = -3
Query: 710 EDYEGSLTL--DTTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQEDD 579
ED +GS+ + DTT++ + +L++ ++L LV +K ++P L E+D
Sbjct: 236 EDCKGSVIVSCDTTSMYYKSLSTLQSLLLVCVKKLQPKLVVTIEED 281
>11_01_0072 +
570345-570476,570640-570831,571095-571260,571487-571872
Length = 291
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 52 ASLK*RNESIGSPTFSVGVLREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRF 207
ASL N I +PT +G L + G S + + GAH G + C F
Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 247 GGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 360
GG H +G GR RGGG R G+G G+
Sbjct: 169 GGYHGDGEAGYGRGRGGRDYDGGRGGGGRRGGRGGGGS 206
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Frame = +1
Query: 241 EQGGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR---GGRMFAPTKP-WR 405
E GG ++ G + R+R H G G+ G++ + GG+M P P WR
Sbjct: 74 EGGGSDKSKGSEVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGKMLRPGFPKWR 132
>08_02_1278 - 25838146-25839411
Length = 421
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 596 APQEDDSLFGLVDLLDFVGYNQGKLGNLF 510
A +E LF L+D+LD V +G+L LF
Sbjct: 89 AAREPQRLFRLLDMLDAVARERGRLDELF 117
>08_02_0105 +
12448808-12449152,12449218-12449409,12449520-12449685,
12449771-12450201
Length = 377
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 52 ASLK*RNESIGSPTFSVGVLREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRF 207
ASL+ N ++ +PT V L ++ G S V + GAH G + C+ F
Sbjct: 197 ASLQGANTNLPAPTSGVATLVQKFRNVGLSAKDMVALSGAHTIGKAR-CTTF 247
>10_01_0359 +
3956527-3956616,3957623-3957818,3958102-3959418,
3959482-3960445,3960588-3960648,3961500-3961946
Length = 1024
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 394 SWGRTYVHHDTCYRRHPDRTYEYHH 320
SWGR H D RR P R+ +HH
Sbjct: 303 SWGRD--HADNRLRRSPSRSSNFHH 325
>07_01_1032 -
8947594-8947769,8947885-8948601,8948973-8949049,
8949264-8949655,8949746-8950002,8950234-8950921
Length = 768
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -2
Query: 516 SFHNVSSSLNERWDAGSSNGCRQGRSPLSEVDATVPTP 403
SF+++++ + + D SN C + +E DA VP+P
Sbjct: 561 SFYDMNNQIKDWMDNAWSNACPELDEDSTESDAPVPSP 598
>05_04_0292 + 19893895-19894983
Length = 362
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 185 GPDGWAP*TRTGGAWLHPAPSHSSLSTPTLK 93
G D WAP GG LHP H++ S L+
Sbjct: 211 GADSWAPLRVAGGIPLHPGFVHATRSKSELE 241
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,249,029
Number of Sequences: 37544
Number of extensions: 490749
Number of successful extensions: 1848
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1841
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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