Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00209
(748 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0) 123 1e-28
SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5) 33 0.19
SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 31 0.75
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 31 0.99
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 31 1.3
SB_31207| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_10758| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 29 4.0
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 29 4.0
SB_25030| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8) 28 7.0
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_8252| Best HMM Match : rve (HMM E-Value=0.13) 28 7.0
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 28 9.2
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 28 9.2
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_23350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0)
Length = 299
Score = 123 bits (297), Expect = 1e-28
Identities = 56/92 (60%), Positives = 60/92 (65%)
Frame = +1
Query: 256 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 435
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WR+WH
Sbjct: 57 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRKWHTKVNVQQ 116
Query: 436 XXXXXXXXXXXXXXXXXXQARGHIMKRFPSFP 531
ARGH +++ P
Sbjct: 117 RRFAVCSALAASALPALIMARGHRIEKIAEVP 148
Score = 100 bits (239), Expect = 1e-21
Identities = 44/79 (55%), Positives = 60/79 (75%)
Frame = +3
Query: 510 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 689
EKI E+PLV++D ++ + KT AV L+ + A+ D+ K S+++RAGKGKMRNRR + R
Sbjct: 142 EKIAEVPLVISDAIESVTKTSAAVKLLKAVNAYEDVEKCIDSKKIRAGKGKMRNRRTVMR 201
Query: 690 KGPLIIFNKDQGLTRAFRN 746
KGPLII+N DQGL +AFRN
Sbjct: 202 KGPLIIYNNDQGLRQAFRN 220
Score = 64.9 bits (151), Expect = 7e-11
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = +2
Query: 86 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 253
ARP+++V++E E+ LP VFKAPIRPDLVN VH +++KN RQPY V+K A
Sbjct: 2 ARPVITVFNENGESA--GQTTLPAVFKAPIRPDLVNFVHSNIAKNKRQPYAVNKLA 55
>SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)
Length = 612
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 373 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWF 260
HH CY H Y Y+ H H + R H YP +H++
Sbjct: 20 HHYCCYCHH---RYCYYRHHHYCWYRHHYHYPCYRHYY 54
>SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 31.9 bits (69), Expect = 0.57
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 358 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 266
Y +HP T+ YH H R H Q+P + H
Sbjct: 232 YHQHPQVTHRYHQHPQVTH-RYHQQHPQVTH 261
Score = 31.5 bits (68), Expect = 0.75
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 358 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 266
Y +HP T+ YHH H + ++ Q+P + H
Sbjct: 413 YHQHPQLTHRYHHQ-HPQVIHRYHQHPQVTH 442
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 31.5 bits (68), Expect = 0.75
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 373 HHDTCYRRHPDRTYEYHHHGHAEFGRQH 290
HH RH R + +HHH H E+ R+H
Sbjct: 325 HHQRHRHRHRHR-HRHHHHHHHEYNRRH 351
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 31.1 bits (67), Expect = 0.99
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = +1
Query: 247 GGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 408
GG Q WG G+ + R GGG R G +G M GG P W R
Sbjct: 14 GGWGQGPGGGWGRGQG-GGMGRGPGGGWGRGSGGGWGRMQGGGMGRGPGGGWGR 66
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = +1
Query: 247 GGCHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 408
GG Q WG G+ + R GGG R G +G M GG P W R
Sbjct: 258 GGWGQGPGGGWGRGQGRG-MGRGPGGGWGRGSGGGWGRMQGGGMGRGPGGGWGR 310
>SB_31207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -3
Query: 680 TTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQEDDSLFGLVDLLDFVGYNQ 531
+T + HF KT R +H+K P E GL+D+LD G+ Q
Sbjct: 18 STVLHHFIDKHAKTPRFLHMKP-----NGPGEGGGSSGLLDMLDAAGFEQ 62
>SB_10758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 62 SSEMSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY-- 235
S +M L R + Y+E ++ + LP V AP+ D+V +V S K S + Y
Sbjct: 475 SPQMPLDFPRSFLEDYAEACANLK---QSLPQVHLAPLASDIVREVESSEVKLSLKFYVS 531
Query: 236 --CVSKEAVTK 262
C S EAV K
Sbjct: 532 ENCPSVEAVVK 542
>SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 382 TYVHHDTCYRRHPDRTYEYHHHGHA 308
TY H DT R+HPD H HA
Sbjct: 123 TYTHQDTQMRKHPDTQIYVHAPRHA 147
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 29.1 bits (62), Expect = 4.0
Identities = 9/35 (25%), Positives = 14/35 (40%)
Frame = -1
Query: 385 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQY 281
R + HH + H + +HHH H H +
Sbjct: 209 RHHQHHQHHHHHHHQHNHHHHHHNHHHHHHHHYHH 243
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 262 TSAESWGTGRAVARIPR-VRGGGTHRSGQGAFGNMCRGGR 378
T +E +G ++ R PR RGGG G G G RGGR
Sbjct: 983 TPSEPSSSGSSIVRRPRRRRGGGGGGGGGGGGGGGRRGGR 1022
>SB_25030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -1
Query: 337 TYEYHHHGHAEFGRQHVQYPMI-QHWFGDSLLAHAVGLP-RVLGHRNVN 197
+Y++HHHG E Q V I + W L +H P RV+G ++
Sbjct: 21 SYQWHHHGTGETDDQPVTTTRITRTWVNRRLNSHRTIKPSRVIGRAQIH 69
>SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8)
Length = 193
Score = 28.3 bits (60), Expect = 7.0
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 373 HHDTCYRRHPDRTYEYHHH 317
HH YR H + Y +HHH
Sbjct: 96 HHHQHYRHHRHQHYRHHHH 114
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 153 GRGLAAPCTVSLFSEYTDTKGRATDRLI 70
G+GL C+V+L S Y T+G+ RL+
Sbjct: 3163 GKGLTTWCSVNLDSVYLSTEGKEVYRLV 3190
>SB_8252| Best HMM Match : rve (HMM E-Value=0.13)
Length = 264
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 379 YVHHDTCYRRHPDRTYEYHHHGH 311
Y HH +RR R + +HHH H
Sbjct: 233 YHHHHHHHRRRRRRRHHHHHHHH 255
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 27.9 bits (59), Expect = 9.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 373 HHDTCYRRHPDRTYEYHHH 317
HH + RH R + YHHH
Sbjct: 570 HHHLHHHRHHHRHHHYHHH 588
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 27.9 bits (59), Expect = 9.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 373 HHDTCYRRHPDRTYEYHHHGH 311
HH + RH DR + + HH H
Sbjct: 340 HHRNKHYRHHDRNHHHRHHHH 360
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -1
Query: 361 CYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 266
CY + + + YHHH H H Q+ H
Sbjct: 246 CYHKLKNPRHRYHHHHHHHHQHNHHQHHHHHH 277
>SB_23350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 704
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 728 QTLILVEDYEGSLTLDTTTVAHFTLTSTKTL 636
Q LIL+ Y + L+T+++ F+L S KT+
Sbjct: 235 QELILIPYYTEKVALETSSLIEFSLLSAKTI 265
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,834,043
Number of Sequences: 59808
Number of extensions: 488674
Number of successful extensions: 1625
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1563
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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