Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00207
(720 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 38 0.007
U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical pr... 33 0.16
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 33 0.27
AL032637-6|CAA21620.2| 422|Caenorhabditis elegans Hypothetical ... 31 0.63
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 31 0.63
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 31 0.63
U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 7.7
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 7.7
AL033514-30|CAA22091.1| 313|Caenorhabditis elegans Hypothetical... 28 7.7
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 588 TFMCSGGEPDK-DTCXGDGGSPLVCPIDY*KNRYVQYGIVTWGIG 719
+ +C+G K D+C GD G PL+C D + G+V+WGIG
Sbjct: 223 SMLCAGYSYGKIDSCQGDSGGPLMCARD---GHWELTGVVSWGIG 264
Score = 31.5 bits (68), Expect = 0.63
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +1
Query: 283 VKEIVIHKDFNKG-NLFYDIALLFLETPVDSAPNVGVACLP--PARERAPAGVRCFATGW 453
V + IH +N G YD A++ + PV+++ CLP PA E C TGW
Sbjct: 127 VTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLPSLPAVENR----LCVVTGW 182
Query: 454 G 456
G
Sbjct: 183 G 183
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +2
Query: 149 GGSLIHPNVVLTAAHYVA 202
GGSLI PN VLTAAH A
Sbjct: 85 GGSLIDPNFVLTAAHCFA 102
>U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical
protein F48E3.4 protein.
Length = 279
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 627 CXGDGGSPLVCPIDY*KNRYVQYGIVT 707
C D G+PL C +D N+YVQ GIV+
Sbjct: 197 CWDDIGAPLECVLDVENNKYVQVGIVS 223
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 VPVVDRNTCQSQLRRTRLGRFFQLHSTFMCSGG-EPDKDTCXGDGGSPLVCPIDY*KNRY 686
+P+++R C + + + + + C+G E D+C GD G P C + +
Sbjct: 173 IPIINRFDCVNSSQI-----YSSMSRSAFCAGYLEGGIDSCQGDSGGPFACRRE--DGAF 225
Query: 687 VQYGIVTWGIG 719
V G+++WG G
Sbjct: 226 VLAGVISWGDG 236
>AL032637-6|CAA21620.2| 422|Caenorhabditis elegans Hypothetical
protein Y43F8C.6 protein.
Length = 422
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -2
Query: 476 SFPNLSFPQPVAKHLTPAGARSLAGGRHATPTFGAESTG 360
S P+ S P P + + T AG +L HA P GA TG
Sbjct: 268 SGPSSSAPGPSSSYSTGAGGGALLSTGHAVPIMGAGGTG 306
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine
nucleotide exchange factorfor RAS protein.
Length = 1413
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 495 DDLVSTFLPELVLP-PTSGEAPDAGGGALPGRWETRHSH 382
+DL S L +P P + P GGG L GR++T SH
Sbjct: 697 NDLFSLLLERFNIPTPKKLQQPKQGGGPLAGRYDTVQSH 735
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 495 DDLVSTFLPELVLP-PTSGEAPDAGGGALPGRWETRHSH 382
+DL S L +P P + P GGG L GR++T SH
Sbjct: 697 NDLFSLLLERFNIPTPKKLQQPKQGGGPLAGRYDTVQSH 735
>U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical
protein B0286.6 protein.
Length = 279
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 328 FYDIALLFLETPVDSAPNVGVACLPPA 408
F DIA+ LE P++ + ++ ACLP A
Sbjct: 120 FNDIAVFELEEPIEFSKDIFPACLPSA 146
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 585 STFMCSGGEPDKDTCXGDGGSPLVCPIDY*KNRY--VQYGIVTWG 713
S CSGG+ DTC G+ LVC K Y + +G +G
Sbjct: 86 SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 585 STFMCSGGEPDKDTCXGDGGSPLVCPIDY*KNRY--VQYGIVTWG 713
S CSGG+ DTC G+ LVC K Y + +G +G
Sbjct: 86 SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 585 STFMCSGGEPDKDTCXGDGGSPLVCPIDY*KNRY--VQYGIVTWG 713
S CSGG+ DTC G+ LVC K Y + +G +G
Sbjct: 86 SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 585 STFMCSGGEPDKDTCXGDGGSPLVCPIDY*KNRY--VQYGIVTWG 713
S CSGG+ DTC G+ LVC K Y + +G +G
Sbjct: 86 SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127
>AL033514-30|CAA22091.1| 313|Caenorhabditis elegans Hypothetical
protein Y75B8A.31 protein.
Length = 313
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +1
Query: 265 PYQDRTVKE----IVIHKDFNKGNLFYDIALLFLETPVDSAPNVGVACLPPARERA 420
PY +R ++ +V++ + N+ D L + TPV+ A V +AC+ P+ ++
Sbjct: 119 PYIERAIENGWGVVVMNTNLNESK---DQDLKYSRTPVEHAETVWIACIEPSNAKS 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,059,713
Number of Sequences: 27780
Number of extensions: 398498
Number of successful extensions: 1196
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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