Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00206
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   1.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   7.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 30  IIDTFRWSVLDLKKKTPKIKSL 95
           I D +R  V DLKK+ PK+K L
Sbjct: 82  IKDNYR-KVTDLKKRFPKLKVL 102


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 562 VTPKFYILCLSRTYC 518
           V P F++LC+   YC
Sbjct: 137 VVPLFFLLCIYYFYC 151


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 463 DLPGNVSEESLAYGVVREPVRK 398
           DLP N+S E L    + + +RK
Sbjct: 382 DLPLNISREMLQQNKILKVIRK 403


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 320 KAVFTQDDHVPAIDGTIEWTPGVTM 394
           KAV  ++ ++  +DG I++ P   +
Sbjct: 722 KAVIAENTYLLTLDGDIDFQPSAVL 746


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 320 KAVFTQDDHVPAIDGTIEWTPGVTM 394
           KAV  ++ ++  +DG I++ P   +
Sbjct: 722 KAVIAENTYLLTLDGDIDFQPSAVL 746


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 320 KAVFTQDDHVPAIDGTIEWTPGVTM 394
           KAV  ++ ++  +DG I++ P   +
Sbjct: 722 KAVIAENTYLLTLDGDIDFQPSAVL 746


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 320 KAVFTQDDHVPAIDGTIEWTPGVTM 394
           KAV  ++ ++  +DG I++ P   +
Sbjct: 722 KAVIAENTYLLTLDGDIDFQPSAVL 746


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,779
Number of Sequences: 336
Number of extensions: 4019
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)