Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00206
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   4.2  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   9.7  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = -1

Query: 481  RRLVQIDLPGNVSEESLAYGVVREPVRKVHGHSWCPLYCTIYGGY 347
            RR+  +D  G  S+    Y    EP++ V   SW   Y   +  Y
Sbjct: 994  RRVPLMDYQGICSDRDNPYTGAGEPLKPVRPMSWLLQYFVSFATY 1038


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +2

Query: 587 RRSLPHRIRSVQDNQTAEERDGVPARQTAKIRSGHQLCVRDPSRRL 724
           ++S P    S   + TA       ++Q+A I SGH L   +PS  L
Sbjct: 62  KQSSPPARLSSSASSTAAALLKTKSKQSALIGSGHYLARDEPSTSL 107


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,711
Number of Sequences: 2352
Number of extensions: 16941
Number of successful extensions: 77
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)