Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00206
         (733 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125954-5|AAD14708.2|  338|Caenorhabditis elegans Seven tm rece...    30   1.9  
AC006769-6|AAF60582.1|  274|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z82057-4|CAB61024.2|  370|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81119-10|CAB61032.2|  370|Caenorhabditis elegans Hypothetical p...    29   4.5  
L39925-1|AAA98782.1|  370|Caenorhabditis elegans cathepsin B-lik...    29   4.5  
L39890-1|AAA98788.1|  370|Caenorhabditis elegans cathepsin B-lik...    29   4.5  

>AF125954-5|AAD14708.2|  338|Caenorhabditis elegans Seven tm
           receptor protein 120 protein.
          Length = 338

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 433 LAYGVVREPVRKVHGHSWCPLYCTIYGGYVIVLSKHGFH 317
           L  G    P+ K  GH     YC+ +G  V+ LS H F+
Sbjct: 74  LYVGTTFLPISKEFGHFIAAFYCSTFGICVLFLSAHFFY 112


>AC006769-6|AAF60582.1|  274|Caenorhabditis elegans Hypothetical
           protein Y45G12C.6 protein.
          Length = 274

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 433 LAYGVVREPVRKVHGHSWCPLYCTIYGGYVIVLSKHGFH 317
           L  G    P+ K  GH     YC+ +G  V+ LS H F+
Sbjct: 74  LYVGTTFLPISKEFGHFIAAFYCSTFGICVLFLSAHFFY 112


>Z82057-4|CAB61024.2|  370|Caenorhabditis elegans Hypothetical
           protein T10H4.12 protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 604 PHSFCPGQPNCRRT*WRTCETNCQDS 681
           P+SF P   NC  +   +C+T CQ S
Sbjct: 192 PYSFAPCTKNCPESTTPSCKTTCQSS 217


>Z81119-10|CAB61032.2|  370|Caenorhabditis elegans Hypothetical
           protein T10H4.12 protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 604 PHSFCPGQPNCRRT*WRTCETNCQDS 681
           P+SF P   NC  +   +C+T CQ S
Sbjct: 192 PYSFAPCTKNCPESTTPSCKTTCQSS 217


>L39925-1|AAA98782.1|  370|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 370

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 604 PHSFCPGQPNCRRT*WRTCETNCQDS 681
           P+SF P   NC  +   +C+T CQ S
Sbjct: 192 PYSFAPCTKNCPESTTPSCKTTCQSS 217


>L39890-1|AAA98788.1|  370|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 370

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 604 PHSFCPGQPNCRRT*WRTCETNCQDS 681
           P+SF P   NC  +   +C+T CQ S
Sbjct: 192 PYSFAPCTKNCPESTTPSCKTTCQSS 217


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,621,639
Number of Sequences: 27780
Number of extensions: 382091
Number of successful extensions: 1261
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)