Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00206
         (733 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    27   0.18 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    27   0.18 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    27   0.18 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   3.0  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   3.9  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   5.2  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    21   9.0  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    21   9.0  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 361 WYNRVDTRSDHELYVPVRGRPHRRDSLRKHYLEDRSEP 474
           ++N +DT+  ++L  PV G   R +    HY  D+S+P
Sbjct: 115 YFNLIDTKC-YKLEHPVTGCGERTEGRCLHYTVDKSKP 151


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 361 WYNRVDTRSDHELYVPVRGRPHRRDSLRKHYLEDRSEP 474
           ++N +DT+  ++L  PV G   R +    HY  D+S+P
Sbjct: 120 YFNLIDTKC-YKLEHPVTGCGERTEGRCLHYTVDKSKP 156


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 361 WYNRVDTRSDHELYVPVRGRPHRRDSLRKHYLEDRSEP 474
           ++N +DT+  ++L  PV G   R +    HY  D+S+P
Sbjct: 120 YFNLIDTKC-YKLEHPVTGCGERTEGRCLHYTVDKSKP 156


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 698 IVDVHFESWQFVSQVRHHVLLQFGCP 621
           IVD H  S  F+    + + L+ GCP
Sbjct: 359 IVDHHTASESFMKHYENEMRLRNGCP 384


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 389 TMNFTYRFADDPIGETLFGN 448
           T+NFTY  A  P G+  FGN
Sbjct: 473 TINFTYSLALSPDGQ--FGN 490


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 563 CCTARTDGRRSLPHRIRSVQDNQTAEE 643
           CC  R  GRRS   R   + +N ++++
Sbjct: 344 CCKTRIIGRRSWVTRESQICNNSSSDK 370


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 546 IFCVYHVRIVNAVYVLSACVQCAGWFRSIFQVMF 445
           + CV +  +V+A  V   C Q AG+  S  + M+
Sbjct: 8   LLCVIYCALVHADTVAILCSQKAGFDLSDLKSMY 41


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 546 IFCVYHVRIVNAVYVLSACVQCAGWFRSIFQVMF 445
           + CV +  +V+A  V   C Q AG+  S  + M+
Sbjct: 8   LLCVIYCALVHADTVAILCSQKAGFDLSDLKSMY 41


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,453
Number of Sequences: 438
Number of extensions: 4735
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)