Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00204
         (828 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P40866 Cluster: Stage V sporulation protein AA; n=1; Ba...    36   1.6  
UniRef50_Q3JVX6 Cluster: Putative uncharacterized protein; n=4; ...    35   2.9  
UniRef50_O77390 Cluster: Putative uncharacterized protein MAL3P6...    35   2.9  

>UniRef50_P40866 Cluster: Stage V sporulation protein AA; n=1;
           Bacillus subtilis|Rep: Stage V sporulation protein AA -
           Bacillus subtilis
          Length = 200

 Score = 35.5 bits (78), Expect = 1.6
 Identities = 15/46 (32%), Positives = 29/46 (63%)
 Frame = +2

Query: 212 IILDILEFVRALNINSSTLKHNTSGGAD*ILALPRKSQNSQQISFI 349
           +ILDI++ +RA+++   T+   T GGA+ I+ +  + +N   + FI
Sbjct: 56  VILDIIQVLRAIHLQDPTIDVQTVGGAETIVEIQYRKRNLSTVLFI 101


>UniRef50_Q3JVX6 Cluster: Putative uncharacterized protein; n=4;
           Burkholderia|Rep: Putative uncharacterized protein -
           Burkholderia pseudomallei (strain 1710b)
          Length = 478

 Score = 34.7 bits (76), Expect = 2.9
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +1

Query: 640 FNSLPVSEVPELLKNEFIAVENARQVHICTDCDVEIELNDESHSWNLCRSTSI 798
           F SLP S +P            +R VHI T C++ +  +   HSW   RST++
Sbjct: 48  FTSLPRSTMPSDTAKPTANASRSRGVHIITACEMPLNTSATGHSWP-TRSTAV 99


>UniRef50_O77390 Cluster: Putative uncharacterized protein MAL3P6.5;
           n=5; Plasmodium|Rep: Putative uncharacterized protein
           MAL3P6.5 - Plasmodium falciparum (isolate 3D7)
          Length = 461

 Score = 34.7 bits (76), Expect = 2.9
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = +1

Query: 385 ENVEDITKNISELTVLSFRKLDDVKKLAKHFTKIINH 495
           + V+DI +N+ +L + + R+++ +  + KH   IINH
Sbjct: 387 QKVKDIYQNVDDLNIKTNREINQINNIIKHIQDIINH 423


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,334,749
Number of Sequences: 1657284
Number of extensions: 12747782
Number of successful extensions: 40959
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 39125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40921
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71734006925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)