Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00204
         (828 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   3.9  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   5.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.0  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 351 KIKLICCEFCDFLGSAKIQ 295
           KIK   C+ CDF+   K++
Sbjct: 198 KIKTFKCKQCDFVAITKLE 216


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = -3

Query: 262 GTVDV-ECPYKLQNVQNNFE 206
           G V V E   K+ N+QNNFE
Sbjct: 47  GKVQVPEALKKIYNIQNNFE 66


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 19/58 (32%), Positives = 24/58 (41%)
 Frame = +3

Query: 120 IFFFLKNLIVFFYSRNH*QISFLGVYLIISKLFWTFWSLYGHSTSTVPPSNTTQAEGQ 293
           +FFF    I+FF      Q S     L  SKL +T+   Y     + PP  T Q   Q
Sbjct: 10  LFFFSFCCILFFIYLYWQQTS----NLTTSKLLYTYRQPYPRQKKSHPPQWTWQCINQ 63


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 577 ATVEVEYIFTTEKKSSLQRQRFNSLPVSEVPELLKN 684
           ATV V Y    +K+   + + F  L   ++PE  +N
Sbjct: 395 ATVTVNYYRHKQKRRDERERYFKGLDEEKLPESGEN 430


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 383 PRTLRTSQRTYLS*PCYRFGSLMTSKS 463
           P +L T QRT  S P Y   S+MTS S
Sbjct: 81  PSSLPT-QRTSTSNPTYSSRSVMTSCS 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,214
Number of Sequences: 336
Number of extensions: 3541
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)