Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00204
         (828 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648...    29   6.0  
02_05_0629 + 30475493-30475674,30477091-30477125,30477566-304777...    28   7.9  
02_05_0366 - 28313190-28313601,28313759-28314225,28315044-283157...    28   7.9  

>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
            31165816-31167650,31169294-31169424,31169993-31170075,
            31170426-31170680,31171125-31171220,31171695-31171775,
            31171811-31171968,31172434-31172534,31172614-31172629,
            31173390-31173439,31174558-31174588,31175156-31175305,
            31176135-31176173,31176288-31176410,31176496-31176552,
            31176837-31176911,31177003-31177107
          Length = 1496

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 210  KLFWTFWSLYGHSTSTVPPSNTTQAEGQTESWHYQESRRIH 332
            K+ WT W L G   + V   N    EG   +W  Q  +++H
Sbjct: 1211 KVMWTHWFLIGSDKTFVTGDN----EGYVIAWDAQSKKKLH 1247


>02_05_0629 +
           30475493-30475674,30477091-30477125,30477566-30477724,
           30478558-30478568,30479669-30479730,30480166-30480265,
           30480495-30480770
          Length = 274

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +3

Query: 483 DHQSSYNRTSPSIQRYLKNLQETHKRII 566
           D  S + R + S+++ L NLQE+HK+++
Sbjct: 126 DANSIWQREAASLRQQLHNLQESHKQLM 153


>02_05_0366 - 28313190-28313601,28313759-28314225,28315044-28315782,
            28316548-28316615,28316693-28316757,28316922-28320162,
            28320239-28320301,28320756-28320824,28321020-28321055,
            28322035-28322280,28322531-28322569,28322695-28322816,
            28322921-28323004,28323100-28323235,28323486-28323535,
            28323620-28323756,28323863-28323951,28324847-28324954,
            28325080-28325163,28325841-28325888,28326036-28326153,
            28328262-28328347
          Length = 2168

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 140  PYCFFLFTESLTNLIFGSLLNYFKIILDILE 232
            P C   F+ SL NL+  S ++ FK +LD +E
Sbjct: 1106 PLCHMEFSSSLANLVLSS-VDRFKTMLDFIE 1135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,555,916
Number of Sequences: 37544
Number of extensions: 331267
Number of successful extensions: 905
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)