Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00204
         (828 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.1  
SB_15879| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.0  

>SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1325

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 702  FDSYEFVFQQFGNFAHR*TVKPLPLQATFLLSRKNVFNFD 583
            FD +       GNF+HR TVK LP     ++S++ +  F+
Sbjct: 1147 FDKFNNFVSGIGNFSHRYTVKHLPDTEENMMSQRVLGPFE 1186


>SB_15879| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 262

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +1

Query: 610 EKKSSLQ--RQRFNSLPVSEVPELLKNEFIAVENARQVHICTD 732
           EK+SS Q  +Q    + V + PELL  + + +E ++ +  C+D
Sbjct: 14  EKQSSRQFNQQDLQDMQVKDEPELLDFQSVVIEASKLLETCSD 56


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,168,974
Number of Sequences: 59808
Number of extensions: 409114
Number of successful extensions: 1217
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2323539746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)