Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00204
         (828 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68114-6|CAA92160.1|  316|Caenorhabditis elegans Hypothetical pr...    30   2.3  
U80839-8|AAB37914.1|  238|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U23524-1|AAC46822.1|  268|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z83231-3|CAB05751.1|  247|Caenorhabditis elegans Hypothetical pr...    29   5.4  
Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical p...    28   7.1  
Z68493-7|CAA92793.1|  339|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ...    28   7.1  
AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical ...    28   7.1  
Z93380-3|CAB07600.1|  339|Caenorhabditis elegans Hypothetical pr...    28   9.4  
Z82266-12|CAB05185.2| 1080|Caenorhabditis elegans Hypothetical p...    28   9.4  
AF039047-10|AAB94229.2|  400|Caenorhabditis elegans Hypothetical...    28   9.4  

>Z68114-6|CAA92160.1|  316|Caenorhabditis elegans Hypothetical
           protein F17A2.9 protein.
          Length = 316

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = -1

Query: 678 QQFGNFAH-R*TVKPLPLQATFLLSRKNVFNFDCRVFGKLSSCAFPVSSLGNVECLDLFC 502
           Q FG F   R + K L L   FLL      N  C++    + C   +  + N+  ++++C
Sbjct: 21  QIFGIFVILRFSTKHLKLWKKFLLC-----NLICQIISVATLCLLQLRQVSNLSPMEIWC 75

Query: 501 YRMIDDLSKVFCQLFDVI 448
           Y  I   S +   LF V+
Sbjct: 76  YGPIRHFSAITSYLFYVL 93


>U80839-8|AAB37914.1|  238|Caenorhabditis elegans Hypothetical
           protein ZC204.10 protein.
          Length = 238

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/53 (24%), Positives = 30/53 (56%)
 Frame = +1

Query: 565 FSKNATVEVEYIFTTEKKSSLQRQRFNSLPVSEVPELLKNEFIAVENARQVHI 723
           ++KN  ++  +I +TE +       F+S+ +  V E+  ++FI ++N R + +
Sbjct: 141 YTKNVNIKNVHIDSTEMEDVPLLNFFSSVELLSVSEIRVSDFIIIQNVRSLEL 193


>U23524-1|AAC46822.1|  268|Caenorhabditis elegans Hypothetical
           protein C29F5.3 protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 22/82 (26%), Positives = 40/82 (48%)
 Frame = +1

Query: 565 FSKNATVEVEYIFTTEKKSSLQRQRFNSLPVSEVPELLKNEFIAVENARQVHICTDCDVE 744
           F ++A     Y  T+++  SL RQR  +LP      L+KN    V + R+ ++C + +  
Sbjct: 79  FYRHAPELFTYENTSQRTESL-RQRLFALPHEPDYNLVKNSKRQVTDERRAYLCAELEA- 136

Query: 745 IELNDESHSWNLCRSTSILKCI 810
           I ++    +  + R  + L CI
Sbjct: 137 ILISMSYAAGKMFRDVAELPCI 158


>Z83231-3|CAB05751.1|  247|Caenorhabditis elegans Hypothetical
           protein F57G9.3 protein.
          Length = 247

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 117 KYNCISRSVCLDFVHFNVDCWCNFNVRAW 31
           KY  ++ SV ++F HF + CW N +   W
Sbjct: 150 KYTILAFSVIMEFYHFYMCCW-NISSNLW 177


>Z74042-17|CAA98537.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 243 HSTSTVPPSNTTQAEGQTESWHYQES 320
           H +STV P+ TT  E + + W + ES
Sbjct: 327 HYSSTVRPTTTTTRESELDRWGFVES 352


>Z68493-7|CAA92793.1|  339|Caenorhabditis elegans Hypothetical
           protein C33A12.10 protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 491 LMILVKCFASFLTSSSFRNDSTVSSDMFFVMSS 393
           L   V  +A +LT  SFRN+ +V+S+  F  SS
Sbjct: 299 LQFCVVTWAFYLTHPSFRNNQSVNSNKIFSTSS 331


>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
           protein Y53C10A.10 protein.
          Length = 1582

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 204 ISKLFWTFWSLYGHSTSTVPPSNTTQAEGQTES 302
           +SK   +F S     T+T PP +TTQA   TES
Sbjct: 460 LSKSTPSFLSPTDSLTATTPPGSTTQAASTTES 492


>AL031623-1|CAA20938.1|  688|Caenorhabditis elegans Hypothetical
           protein T11F9.12 protein.
          Length = 688

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 243 HSTSTVPPSNTTQAEGQTESWHYQES 320
           H +STV P+ TT  E + + W + ES
Sbjct: 327 HYSSTVRPTTTTTRESELDRWGFVES 352


>Z93380-3|CAB07600.1|  339|Caenorhabditis elegans Hypothetical
           protein F28C12.4 protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 92  TDLEMQLYFYFFLS*KPYCFFLFTESLTNLIFGSLLNYF 208
           TD E++LYFY+  +      +  T S+ +L F  L++YF
Sbjct: 107 TDCEVELYFYYLTN------YFSTYSVFSLTFDRLISYF 139


>Z82266-12|CAB05185.2| 1080|Caenorhabditis elegans Hypothetical
           protein F23B2.11 protein.
          Length = 1080

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +2

Query: 194 LLNYFKIILDILEFVRALNINSST 265
           LLN  +++ D+ EF++A+NI + T
Sbjct: 667 LLNSLQMLYDLAEFIKAVNIRTGT 690


>AF039047-10|AAB94229.2|  400|Caenorhabditis elegans Hypothetical
           protein K11D12.9 protein.
          Length = 400

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
 Frame = +2

Query: 206 FKIILDILEFVRALNINSSTLKHNTSGG--AD*ILAL-PRKSQNSQQISFILTATINFAL 376
           F ++LDIL  V     + S+ KHN+ G   +  + +L P  S++ + +S  +  + +F L
Sbjct: 44  FDVMLDILNKVTGKGDSRSSRKHNSPGDLMSSSVTSLHPHSSKSHRNLS--VGRSSSFHL 101

Query: 377 KWPRTLRTS 403
             PR+ R S
Sbjct: 102 STPRSTRDS 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,028,528
Number of Sequences: 27780
Number of extensions: 337168
Number of successful extensions: 1174
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)