Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00203
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68214-4|CAA92447.1| 397|Caenorhabditis elegans Hypothetical pr... 65 4e-11
U41012-1|AAA82294.3| 397|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U41012-2|AAV28364.1| 411|Caenorhabditis elegans Hypothetical pr... 61 7e-10
Z68214-3|CAA92445.1| 399|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z68214-5|CAA92446.2| 397|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z81068-7|CAB02987.4| 133|Caenorhabditis elegans Hypothetical pr... 29 2.7
U39647-1|AAA80375.2| 351|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z54271-1|CAA91032.1| 550|Caenorhabditis elegans Hypothetical pr... 29 4.8
>Z68214-4|CAA92447.1| 397|Caenorhabditis elegans Hypothetical
protein C10C5.4 protein.
Length = 397
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 YEFEQKDPY--TTPTQLDDANIYWKAFKQTAQELRMSIKPQTFTGGTDSRYLRELGIPAL 175
YEF Q Y +P DD +W AF+ + ++ + G TDSR++R+ G+PA+
Sbjct: 299 YEFSQHSDYKPVSPHTRDDP--FWAAFEDSLKQENCEFTTEVCVGSTDSRFVRKAGVPAI 356
Query: 176 GFSPIHNTTPALHEHNEHLGLDVFI 250
FSP+ NT H HNE L VF+
Sbjct: 357 NFSPMINTPVRAHAHNEFLNEKVFL 381
>U41012-1|AAA82294.3| 397|Caenorhabditis elegans Hypothetical
protein C06A6.4a protein.
Length = 397
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/83 (38%), Positives = 43/83 (51%)
Frame = +2
Query: 2 YEFEQKDPYTTPTQLDDANIYWKAFKQTAQELRMSIKPQTFTGGTDSRYLRELGIPALGF 181
YEF Q + + + +W A Q+ K + F G TDSR++R GI A+GF
Sbjct: 298 YEFMQFSNFKLISPNTREDPFWAAIDDALQKEGCKYKKEIFIGATDSRFVRAQGIRAIGF 357
Query: 182 SPIHNTTPALHEHNEHLGLDVFI 250
SPI NT LH+HNE L F+
Sbjct: 358 SPIINTPSLLHDHNEFLNEKTFL 380
>U41012-2|AAV28364.1| 411|Caenorhabditis elegans Hypothetical
protein C06A6.4b protein.
Length = 411
Score = 61.3 bits (142), Expect = 7e-10
Identities = 28/63 (44%), Positives = 36/63 (57%)
Frame = +2
Query: 62 YWKAFKQTAQELRMSIKPQTFTGGTDSRYLRELGIPALGFSPIHNTTPALHEHNEHLGLD 241
+W A Q+ K + F G TDSR++R GI A+GFSPI NT LH+HNE L
Sbjct: 332 FWAAIDDALQKEGCKYKKEIFIGATDSRFVRAQGIRAIGFSPIINTPSLLHDHNEFLNEK 391
Query: 242 VFI 250
F+
Sbjct: 392 TFL 394
>Z68214-3|CAA92445.1| 399|Caenorhabditis elegans Hypothetical
protein C10C5.3 protein.
Length = 399
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 YEFEQKDPY--TTPTQLDDANIYWKAFKQTAQELRMSIKPQTFTGGTDSRYLRELGIPAL 175
YEF + TP DD +W AF+ + ++ + + G TDSR +RE G+ A+
Sbjct: 299 YEFSKHSDLKLVTPHTRDDP--FWVAFEDSLKQEKCKFTTEVLIGSTDSRIVREAGVRAI 356
Query: 176 GFSPIHNTTPALHEHNEHLGLDVFI 250
FSP+ NT H HNE L VF+
Sbjct: 357 NFSPLINTPLLAHAHNEFLNEKVFL 381
>Z68214-5|CAA92446.2| 397|Caenorhabditis elegans Hypothetical
protein C10C5.5 protein.
Length = 397
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = +2
Query: 2 YEFEQKDPYTTPTQLDDANIYWKAFKQTAQELRMSIKPQTFTGGTDSRYLRELGIPALGF 181
YEF Q + N +W AF+ + + + TDSR++R G+ ++ F
Sbjct: 299 YEFSQYSDQKPISAHTRDNSFWAAFEDSLNQENCKFEKGIMVASTDSRFVRYEGVNSINF 358
Query: 182 SPIHNTTPALHEHNEHLGLDVFI 250
SP+ NT H+HNE+L VF+
Sbjct: 359 SPMINTPFLPHDHNEYLNEKVFL 381
>Z81068-7|CAB02987.4| 133|Caenorhabditis elegans Hypothetical
protein F25H5.6 protein.
Length = 133
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 461 RLAAHPPFASWRNSEEPAPIALPNSCAPEW 550
+LA H ++ +EP P LP+S PEW
Sbjct: 46 KLATHVCINAYTQGDEPGPKILPDSEYPEW 75
>U39647-1|AAA80375.2| 351|Caenorhabditis elegans Hypothetical
protein C44E12.1 protein.
Length = 351
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +2
Query: 23 PYTTPTQLDDANIYWKAFKQTAQELRMSIKPQTFTGGTDSRYLRELGI 166
PY PTQ D+ NIY +L + T TD R LG+
Sbjct: 82 PYFPPTQ-DEQNIYGNGSNDAKGQLAAMVTAATIISKTDEDVARALGL 128
>Z54271-1|CAA91032.1| 550|Caenorhabditis elegans Hypothetical
protein F21D5.1 protein.
Length = 550
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +2
Query: 89 QELRMSIKPQTFTGGTDSRYLRELGIPALGFSPIHNTTPALHEHNEHLGLDVFI 250
+ LR+ I + G+ +RY+RE LG PI T H H D+ I
Sbjct: 338 ERLRLGIVQTAYANGSSTRYIRE----KLGIEPIIVPTGVKHLHEAASEFDIGI 387
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,006,262
Number of Sequences: 27780
Number of extensions: 352821
Number of successful extensions: 884
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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