Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00202
         (791 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_24987| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.5  
SB_11293| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.7  

>SB_24987| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 684

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -1

Query: 737 CKFIM*IGIFTFIRKKKSFYQEYDDSVDIL 648
           CK I+ + IFTF+    SFY+ Y +S D+L
Sbjct: 13  CKAIIFLTIFTFLILGVSFYRYYHNSKDLL 42


>SB_11293| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 327

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +3

Query: 645 VQNINTVIIFLIKTFFFSDKSKNTNLHDEFTMTVL*LLLPNNSW 776
           V  ++T  + ++K FF++DK       D F   +  L + +N+W
Sbjct: 49  VTTVSTAFV-VVKVFFYNDKEFQRKAKDTFDTALQLLTMEDNTW 91


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,504,948
Number of Sequences: 59808
Number of extensions: 390296
Number of successful extensions: 819
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2179815638
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)