Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00202
(791 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 26 1.2
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 26 1.5
AY344822-1|AAR02433.1| 257|Anopheles gambiae CP5039 protein. 25 2.7
AY344821-1|AAR02432.1| 257|Anopheles gambiae CP5039 protein. 25 2.7
AY344820-1|AAR02431.1| 257|Anopheles gambiae CP5039 protein. 25 2.7
AY344819-1|AAR02430.1| 257|Anopheles gambiae CP5039 protein. 25 2.7
AY344818-1|AAR02429.1| 257|Anopheles gambiae CP5039 protein. 25 2.7
AY344817-1|AAR02428.1| 257|Anopheles gambiae CP5039 protein. 25 2.7
AY344816-1|AAR02427.1| 257|Anopheles gambiae CP5039 protein. 25 2.7
AY344815-1|AAR02426.1| 257|Anopheles gambiae CP5039 protein. 25 2.7
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 23 8.2
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 23 8.2
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 26.2 bits (55), Expect = 1.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 43 RRSLDKFKICVRCGSAVH 96
R S D+ ++C+RCGS H
Sbjct: 491 RSSTDRQQLCIRCGSEGH 508
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 25.8 bits (54), Expect = 1.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 43 RRSLDKFKICVRCGSAVHL 99
R +D+ K C+RCG+ HL
Sbjct: 378 RSPVDRQKACIRCGAEGHL 396
>AY344822-1|AAR02433.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 25.0 bits (52), Expect = 2.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 687 FFFSDKSKNTNLHDEFTM 740
F FS S N NLH FT+
Sbjct: 89 FLFSSNSDNQNLHTTFTV 106
>AY344821-1|AAR02432.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 25.0 bits (52), Expect = 2.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 687 FFFSDKSKNTNLHDEFTM 740
F FS S N NLH FT+
Sbjct: 89 FLFSSNSDNQNLHTTFTV 106
>AY344820-1|AAR02431.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 25.0 bits (52), Expect = 2.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 687 FFFSDKSKNTNLHDEFTM 740
F FS S N NLH FT+
Sbjct: 89 FLFSSNSDNQNLHTTFTV 106
>AY344819-1|AAR02430.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 25.0 bits (52), Expect = 2.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 687 FFFSDKSKNTNLHDEFTM 740
F FS S N NLH FT+
Sbjct: 89 FLFSSNSDNQNLHTTFTV 106
>AY344818-1|AAR02429.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 25.0 bits (52), Expect = 2.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 687 FFFSDKSKNTNLHDEFTM 740
F FS S N NLH FT+
Sbjct: 89 FLFSSNSDNQNLHTTFTV 106
>AY344817-1|AAR02428.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 25.0 bits (52), Expect = 2.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 687 FFFSDKSKNTNLHDEFTM 740
F FS S N NLH FT+
Sbjct: 89 FLFSSNSDNQNLHTTFTV 106
>AY344816-1|AAR02427.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 25.0 bits (52), Expect = 2.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 687 FFFSDKSKNTNLHDEFTM 740
F FS S N NLH FT+
Sbjct: 89 FLFSSNSDNQNLHTTFTV 106
>AY344815-1|AAR02426.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 25.0 bits (52), Expect = 2.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 687 FFFSDKSKNTNLHDEFTM 740
F FS S N NLH FT+
Sbjct: 89 FLFSSNSDNQNLHTTFTV 106
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 23.4 bits (48), Expect = 8.2
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 43 RRSLDKFKICVRCGSAVH 96
R +D+ +C+RCG H
Sbjct: 565 RSPVDRQNVCIRCGQEGH 582
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 23.4 bits (48), Expect = 8.2
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +1
Query: 55 DKFKICVRCGSAVHLP*GALR*CVTDFRVSKTIKIDCNSLRRTRTQNTITF 207
++FK CV+C P C T+ + I ++ ++ R N TF
Sbjct: 682 NEFKHCVQCQQYKTGPLAEANECATNCTLFVPIPVEKVTIDEERNDNKCTF 732
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,055
Number of Sequences: 2352
Number of extensions: 13836
Number of successful extensions: 29
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -