Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00197
(564 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137; Eukar... 139 4e-32
UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58; Eukary... 135 6e-31
UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e cont... 100 5e-20
UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal ... 90 4e-17
UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza ... 85 1e-15
UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia... 71 1e-11
UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, wh... 71 1e-11
UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative; ... 70 3e-11
UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p... 69 6e-11
UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1; Encepha... 69 6e-11
UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4; Euryar... 67 3e-10
UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9; Euryar... 66 4e-10
UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4; Thermo... 64 2e-09
UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10; Archa... 62 1e-08
UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory ... 60 3e-08
UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4; Methan... 60 4e-08
UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiell... 59 6e-08
UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11; Archa... 59 6e-08
UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 57 3e-07
UniRef50_A0SNY5 Cluster: SSU ribosomal protein S13AB; n=1; uncul... 56 8e-07
UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5; Haloba... 55 1e-06
UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 54 2e-06
UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1; Nanoar... 52 7e-06
UniRef50_Q00VP7 Cluster: Chromosome 14 contig 1, DNA sequence; n... 49 7e-05
UniRef50_A7PUB9 Cluster: Chromosome chr7 scaffold_31, whole geno... 49 9e-05
UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14; Bacter... 49 9e-05
UniRef50_A6SEJ9 Cluster: Putative uncharacterized protein; n=2; ... 38 0.12
UniRef50_Q6UVP6 Cluster: Ribosomal protein S13; n=1; Pseudendocl... 36 0.65
UniRef50_A6RYD3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.65
UniRef50_UPI00004999F3 Cluster: hypothetical protein 23.t00039; ... 36 0.86
UniRef50_Q7PY55 Cluster: ENSANGP00000013280; n=4; Endopterygota|... 36 0.86
UniRef50_P46747 Cluster: Mitochondrial ribosomal protein S13; n=... 36 0.86
UniRef50_Q601J1 Cluster: 30S ribosomal protein S13; n=3; Mycopla... 36 0.86
UniRef50_Q4WP11 Cluster: 40S ribosomal protein S13; n=5; Eurotio... 35 1.5
UniRef50_A1CXK9 Cluster: 40S ribosomal protein S13; n=7; Pezizom... 35 1.5
UniRef50_Q2C992 Cluster: Putative uncharacterized protein; n=5; ... 34 2.0
UniRef50_Q0QIP8 Cluster: Ribosomal protein S13; n=1; Oltmannsiel... 34 2.0
UniRef50_Q5B4R2 Cluster: Putative uncharacterized protein; n=1; ... 34 2.0
UniRef50_A6PT06 Cluster: Ribosomal protein S13; n=1; Victivallis... 34 2.6
UniRef50_O59772 Cluster: Mitochondrial ribosomal protein subunit... 34 2.6
UniRef50_O66486 Cluster: 30S ribosomal protein S13; n=28; cellul... 34 2.6
UniRef50_A5FGA8 Cluster: DNA-(Apurinic or apyrimidinic site) lya... 33 3.5
UniRef50_Q9TCB7 Cluster: Ribosomal protein S13; n=1; Nephroselmi... 33 3.5
UniRef50_O21258 Cluster: Ribosomal protein S13; n=1; Reclinomona... 33 4.6
UniRef50_Q6CFI9 Cluster: Yarrowia lipolytica chromosome B of str... 33 4.6
UniRef50_Q8W9S0 Cluster: Ribosomal protein S13; n=1; Mesostigma ... 33 6.1
UniRef50_Q5NQ42 Cluster: 30S ribosomal protein S13; n=107; cellu... 33 6.1
UniRef50_A1L3M1 Cluster: LOC100037042 protein; n=1; Xenopus laev... 32 8.1
UniRef50_Q7QRY8 Cluster: GLP_549_7513_8304; n=1; Giardia lamblia... 32 8.1
UniRef50_A0DQX8 Cluster: Chromosome undetermined scaffold_6, who... 32 8.1
UniRef50_P42732 Cluster: 30S ribosomal protein S13, chloroplast ... 32 8.1
>UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137;
Eukaryota|Rep: 40S ribosomal protein S18 - Drosophila
melanogaster (Fruit fly)
Length = 152
Score = 139 bits (337), Expect = 4e-32
Identities = 59/70 (84%), Positives = 68/70 (97%)
Frame = +3
Query: 255 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 434
K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RH
Sbjct: 66 KVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRH 125
Query: 435 YWGLRVRGQH 464
YWGLRVRGQH
Sbjct: 126 YWGLRVRGQH 135
Score = 126 bits (305), Expect = 3e-28
Identities = 60/67 (89%), Positives = 64/67 (95%)
Frame = +1
Query: 61 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 240
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 241 EEEVEKL 261
EEEV+K+
Sbjct: 61 EEEVDKV 67
>UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58;
Eukaryota|Rep: 40S ribosomal protein S18 - Homo sapiens
(Human)
Length = 152
Score = 135 bits (327), Expect = 6e-31
Identities = 57/70 (81%), Positives = 66/70 (94%)
Frame = +3
Query: 255 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 434
++ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH
Sbjct: 66 RVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRH 125
Query: 435 YWGLRVRGQH 464
+WGLRVRGQH
Sbjct: 126 FWGLRVRGQH 135
Score = 115 bits (277), Expect = 7e-25
Identities = 51/67 (76%), Positives = 64/67 (95%)
Frame = +1
Query: 61 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 240
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE T
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 241 EEEVEKL 261
E+EVE++
Sbjct: 61 EDEVERV 67
>UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: ribosomal protein S13p/S18e containing
protein - Tetrahymena thermophila SB210
Length = 155
Score = 99.5 bits (237), Expect = 5e-20
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +3
Query: 255 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 434
KI ++++P + IP W LNR D DGK Q+ S+ LD+K+REDLERLKKI++HRG+RH
Sbjct: 68 KITDLIADPEAHGIPTWLLNRINDFKDGKNYQMASNTLDTKMREDLERLKKIKSHRGLRH 127
Query: 435 YWGLRVRGQH 464
+WGL+VRGQH
Sbjct: 128 FWGLKVRGQH 137
Score = 65.3 bits (152), Expect = 9e-10
Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Frame = +1
Query: 61 MSLVIPDK--FQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGE 234
MS VI + F++I RI+NTNIDGKR A+T I+G+GRR++ I+ K ID + RAG
Sbjct: 1 MSFVIEKESDFKYIHRILNTNIDGKRITPIALTGIRGIGRRFAYIICKVLKIDPNARAGL 60
Query: 235 CTEEEVEKLS 264
TE++ K++
Sbjct: 61 LTEDQCNKIT 70
>UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal
protein S18; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S18 - Rattus norvegicus
Length = 170
Score = 89.8 bits (213), Expect = 4e-17
Identities = 42/69 (60%), Positives = 54/69 (78%)
Frame = +3
Query: 255 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 434
++ITIM NPRQY+IP QK + DG+ SQ+ ++ LD+KLRE+LERLKKIRAHRG+RH
Sbjct: 66 RVITIMQNPRQYEIP------QKGVRDGRCSQVPANGLDNKLREELERLKKIRAHRGLRH 119
Query: 435 YWGLRVRGQ 461
+WGL V Q
Sbjct: 120 FWGLHVHCQ 128
Score = 84.2 bits (199), Expect = 2e-15
Identities = 38/67 (56%), Positives = 55/67 (82%)
Frame = +1
Query: 61 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 240
MSLVI +K QHIL+++NTNID +++ FA+TA KG +RY+++VL+KA IDL K AGE T
Sbjct: 1 MSLVISEKSQHILQVLNTNIDEQQETAFAITATKGAEQRYAHVVLRKAGIDLTKMAGELT 60
Query: 241 EEEVEKL 261
E++VE++
Sbjct: 61 EDKVERV 67
>UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Ribosomal protein
S18-like - Oryza sativa subsp. japonica (Rice)
Length = 145
Score = 85.0 bits (201), Expect = 1e-15
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = +3
Query: 315 RQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 464
++KD DG++SQ+ S+ LD KLR+DLERLKKIR HRG+RHYWGLRVRGQH
Sbjct: 79 QKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH 128
>UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_549_8004_7540 - Giardia lamblia ATCC
50803
Length = 154
Score = 71.3 bits (167), Expect = 1e-11
Identities = 32/66 (48%), Positives = 48/66 (72%)
Frame = +1
Query: 64 SLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTE 243
++V P+ ++ +LR+ NTNI GK + A+ IKG+GRR++N+ LKKA+ID+ KRAGE T
Sbjct: 3 TIVQPNDYRDLLRMFNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTA 62
Query: 244 EEVEKL 261
E + L
Sbjct: 63 AEEDAL 68
Score = 67.3 bits (157), Expect = 2e-10
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = +3
Query: 258 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 437
++ ++ +P + IP W LNR D GK + + + S R DLERL+K R RG+RH+
Sbjct: 68 LMKVLEDPLSHGIPAWMLNRNNDFESGKDMHILVNTIASTHRADLERLRKTRCERGVRHH 127
Query: 438 WGLRVRGQH 464
L+VRGQH
Sbjct: 128 HNLKVRGQH 136
>UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_89,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 193
Score = 71.3 bits (167), Expect = 1e-11
Identities = 32/70 (45%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Frame = +1
Query: 61 MSLVIP--DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGE 234
MSLV+ D+F+ I+RI+NTN+DGK+++ + + +IKG+GRR++ + K ++L KRAGE
Sbjct: 1 MSLVLEKADQFRQIIRILNTNVDGKQQMAYEIRSIKGIGRRFAIQICKVLRLNLTKRAGE 60
Query: 235 CTEEEVEKLS 264
T+EE K++
Sbjct: 61 LTDEEAHKIT 70
Score = 50.8 bits (116), Expect = 2e-05
Identities = 22/45 (48%), Positives = 36/45 (80%), Gaps = 2/45 (4%)
Frame = +3
Query: 321 KDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG--MRHYWGLR 449
+D+ +GK ++T++ L++KLREDLER+KKI+ + +RH+WGLR
Sbjct: 81 RDLKNGKNYEVTTNELETKLREDLERIKKIKYSQWLCLRHHWGLR 125
>UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S13p/S18e, putative - Trichomonas vaginalis G3
Length = 155
Score = 70.1 bits (164), Expect = 3e-11
Identities = 29/68 (42%), Positives = 49/68 (72%)
Frame = +3
Query: 258 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 437
I++I+ NP +++IP W LNR+ D G+ + +++L + +R ++ER+KK+R RG+RH
Sbjct: 69 IVSIIQNPTEHQIPVWMLNRRFDRATGQNTHWVATDLSANIRAEIERMKKMRMKRGIRHG 128
Query: 438 WGLRVRGQ 461
GL+VRGQ
Sbjct: 129 LGLKVRGQ 136
Score = 57.6 bits (133), Expect = 2e-07
Identities = 24/60 (40%), Positives = 43/60 (71%)
Frame = +1
Query: 76 PDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVE 255
P F+ ++R+++TN+DG+R + A+T I G+GRR++ V+++A +D +RAG T +E E
Sbjct: 8 PAAFRDMVRMLSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEE 67
>UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p -
Drosophila melanogaster (Fruit fly)
Length = 246
Score = 69.3 bits (162), Expect = 6e-11
Identities = 31/35 (88%), Positives = 34/35 (97%)
Frame = +1
Query: 157 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKL 261
IKGVGRRYSNIVLKKAD+DL KRAGECTEEEV+K+
Sbjct: 1 IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKV 35
>UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S18
- Encephalitozoon cuniculi
Length = 153
Score = 69.3 bits (162), Expect = 6e-11
Identities = 30/63 (47%), Positives = 47/63 (74%)
Frame = +1
Query: 76 PDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVE 255
P + Q+I+RI NTNIDG +++ FA+T I+G+G R + + K+ IDL KRAGE E+E++
Sbjct: 7 PAEVQYIVRIHNTNIDGTKRIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMK 66
Query: 256 KLS 264
++S
Sbjct: 67 RIS 69
Score = 53.2 bits (122), Expect = 4e-06
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +3
Query: 255 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 434
+I + +P IP+ ++N Q+DI+DG S L + LD+ LR +ER KK + R R
Sbjct: 67 RISDAILDPASVGIPESYMNHQRDIIDGTTSHLIGTRLDADLRMMIERGKKNKRIRAYRL 126
Query: 435 YWGLRVRGQ 461
GL+VRGQ
Sbjct: 127 DVGLKVRGQ 135
>UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanosarcina acetivorans
Length = 162
Score = 66.9 bits (156), Expect = 3e-10
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +3
Query: 294 IPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 461
+P W LNRQKD+ G+ L +++ RED+ LKK+RA+RG+RH GL+VRGQ
Sbjct: 89 VPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVRGQ 144
Score = 57.6 bits (133), Expect = 2e-07
Identities = 25/61 (40%), Positives = 40/61 (65%)
Frame = +1
Query: 79 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 258
++ +H++RIMNT++ G + V +A+T + GVGRR + ++ K A +D G EEEV K
Sbjct: 18 EELRHLVRIMNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAK 77
Query: 259 L 261
L
Sbjct: 78 L 78
>UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanococcus jannaschii
Length = 150
Score = 66.5 bits (155), Expect = 4e-10
Identities = 30/69 (43%), Positives = 45/69 (65%)
Frame = +3
Query: 255 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 434
KI ++++P ++ IP W NR+KD V G+ + S+L +ED+ RLK+IR +RG+RH
Sbjct: 63 KIEEVLADPAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRH 122
Query: 435 YWGLRVRGQ 461
GL RGQ
Sbjct: 123 ELGLPCRGQ 131
Score = 54.0 bits (124), Expect = 2e-06
Identities = 22/60 (36%), Positives = 42/60 (70%)
Frame = +1
Query: 82 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKL 261
+F++++R+ T++DG +K++ A+ I GVG + +++ A +D +K AG TEEEV+K+
Sbjct: 5 EFKYLIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKI 64
>UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S13P -
Thermoplasma acidophilum
Length = 171
Score = 64.1 bits (149), Expect = 2e-09
Identities = 25/60 (41%), Positives = 45/60 (75%)
Frame = +3
Query: 282 RQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 461
++Y +P+W LN +++ V GK L S++L+ +++ED+ +KKIR+++G+RH G +VRGQ
Sbjct: 93 KEYDLPEWLLNHRREPVTGKNLNLVSTDLEIQVQEDINLMKKIRSYKGIRHEKGKKVRGQ 152
Score = 59.3 bits (137), Expect = 6e-08
Identities = 23/59 (38%), Positives = 43/59 (72%)
Frame = +1
Query: 85 FQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKL 261
FQ+I+RI N +++G+R + A++ +KG+G R ++ ++ D+ +DK+ GE EE++EKL
Sbjct: 28 FQYIVRIANKDLNGERLLPLALSDLKGIGERLGYVIAERLDLPIDKKIGELKEEQLEKL 86
>UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10;
Archaea|Rep: 30S ribosomal protein S13P - Sulfolobus
tokodaii
Length = 172
Score = 61.7 bits (143), Expect = 1e-08
Identities = 29/69 (42%), Positives = 45/69 (65%)
Frame = +3
Query: 255 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 434
KI +++ + ++P+W NR+KD G L +S+L +R D+ER KKI++ RG+RH
Sbjct: 64 KIENYLTDKKILEVPNWMYNRRKDYESGIDMHLVTSDLIFYVRNDIEREKKIKSWRGVRH 123
Query: 435 YWGLRVRGQ 461
GL+VRGQ
Sbjct: 124 SLGLKVRGQ 132
Score = 53.2 bits (122), Expect = 4e-06
Identities = 19/60 (31%), Positives = 41/60 (68%)
Frame = +1
Query: 82 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKL 261
+F++I+R+ ++DG KV +A+ +KG+G + ++ K +D D+R GE ++E+++K+
Sbjct: 6 QFKYIVRLFGQDVDGTMKVPYALAMVKGIGYNTARAIVFKLGLDKDRRLGELSDEDIKKI 65
>UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory
specific medium-chain acyl CoA synthetase; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
olfactory specific medium-chain acyl CoA synthetase -
Ornithorhynchus anatinus
Length = 176
Score = 60.5 bits (140), Expect = 3e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +3
Query: 270 MSNPRQYKIPDWFLNRQKDIVDGKYSQL 353
M NPRQYKIPDWFLNRQKD+ DGKYSQ+
Sbjct: 1 MQNPRQYKIPDWFLNRQKDVKDGKYSQV 28
>UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4;
Methanococcus|Rep: 30S ribosomal protein S13P -
Methanococcus maripaludis
Length = 149
Score = 60.1 bits (139), Expect = 4e-08
Identities = 26/69 (37%), Positives = 42/69 (60%)
Frame = +3
Query: 255 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 434
KI +++ +P + IP W NR+KD+ G L ++L ++ED+ +KKIR ++G+RH
Sbjct: 63 KIESVLEDPATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGIRH 122
Query: 435 YWGLRVRGQ 461
L RGQ
Sbjct: 123 ELRLPCRGQ 131
Score = 48.4 bits (110), Expect = 1e-04
Identities = 19/60 (31%), Positives = 40/60 (66%)
Frame = +1
Query: 82 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKL 261
+F+H +RI T+++GK + +A+ +KG+GR + V++ ++D ++AG +E+V K+
Sbjct: 5 EFKHRIRISKTDLEGKNPLEYALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKI 64
>UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiella
natans|Rep: Ribosomal protein S18 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 159
Score = 59.3 bits (137), Expect = 6e-08
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = +3
Query: 255 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 434
+++ I + P W +NR+ D + G + S+ LDS L+ED++RL I+ ++G+RH
Sbjct: 72 EVVNIFGKSSRKAFPSWLMNRRADFLTGDNLHVLSTVLDSALQEDIKRLVTIKNNKGLRH 131
Query: 435 YWGLRVRGQH 464
L+ RGQH
Sbjct: 132 LSRLKTRGQH 141
Score = 35.9 bits (79), Expect = 0.65
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +1
Query: 79 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 258
+K +RI + NI+G F + IKGVG R SN++ K D++ + + ++E+
Sbjct: 13 EKSMTFIRIFDCNINGSLSCNFGLRNIKGVGIRMSNVLRKILKKDINYKLYNIEKADLEE 72
Query: 259 L 261
+
Sbjct: 73 V 73
>UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11;
Archaea|Rep: 30S ribosomal protein S13P - Uncultured
methanogenic archaeon RC-I
Length = 224
Score = 59.3 bits (137), Expect = 6e-08
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +1
Query: 79 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 258
D+ ++I+RI NT++DG + V FA+T IKG+G R S I+ ++A +D G E+V+K
Sbjct: 67 DEIKYIVRIANTDLDGTQTVEFALTGIKGIGNRISKIIARQAQVDPHATMGYLPPEQVDK 126
Query: 259 L 261
L
Sbjct: 127 L 127
Score = 56.8 bits (131), Expect = 3e-07
Identities = 26/69 (37%), Positives = 44/69 (63%)
Frame = +3
Query: 255 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 434
K+ ++ N + +P W LNR++DI G+ L +L ++ED+ +KKIR+++G+RH
Sbjct: 126 KLRAVIDN-LEANVPVWMLNRRRDIYTGEDKHLYGVDLTMAVKEDINIMKKIRSYKGIRH 184
Query: 435 YWGLRVRGQ 461
G +VRGQ
Sbjct: 185 ERGQKVRGQ 193
>UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S13P -
Cenarchaeum symbiosum
Length = 227
Score = 56.8 bits (131), Expect = 3e-07
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +3
Query: 267 IMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGL 446
++ +P P WFLNR+KD+ G+ + +S+++ +R D+ER + + +G RH +GL
Sbjct: 112 LLQDPAGAGFPTWFLNRRKDLETGEDRHIFTSDIEFTVRNDVERERVSGSWKGYRHMFGL 171
Query: 447 RVRGQ 461
+VRGQ
Sbjct: 172 KVRGQ 176
Score = 42.7 bits (96), Expect = 0.006
Identities = 16/60 (26%), Positives = 36/60 (60%)
Frame = +1
Query: 82 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKL 261
+++HI+RI+ ++ G++K + + I+G+G ++ +L ID + G T+E+V +
Sbjct: 50 EYKHIVRILGNDLPGEKKAVVGLRQIRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASI 109
>UniRef50_A0SNY5 Cluster: SSU ribosomal protein S13AB; n=1;
uncultured euryarchaeote ARMAN-2|Rep: SSU ribosomal
protein S13AB - uncultured euryarchaeote ARMAN-2
Length = 177
Score = 55.6 bits (128), Expect = 8e-07
Identities = 24/66 (36%), Positives = 40/66 (60%)
Frame = +3
Query: 267 IMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGL 446
++ +P +Y +P + LNR+ D+ GK L ++L +R+ + R +R RG RH +G
Sbjct: 81 LIKDPHKYGVPKYLLNRRNDMDTGKDMHLIGNDLIFAVRQSINRDVTLRVWRGYRHQYGQ 140
Query: 447 RVRGQH 464
+VRGQH
Sbjct: 141 KVRGQH 146
>UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/56 (41%), Positives = 36/56 (64%)
Frame = +3
Query: 294 IPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 461
+P+W N QKD G+ + T ++L R+D+ R+K I ++RG+RH G +VRGQ
Sbjct: 89 VPEWMTNHQKDYFTGETTHETGNDLQLTRRQDINRMKMIDSYRGVRHKRGQKVRGQ 144
Score = 44.8 bits (101), Expect = 0.001
Identities = 18/61 (29%), Positives = 38/61 (62%)
Frame = +1
Query: 79 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 258
+ ++ +RI T++DG + V A+T + G+G R + I+ +KAD+D G+ ++ +E+
Sbjct: 18 EDIRYFVRIGQTDLDGTKSVERALTELNGIGHRAARIIAQKADVDRRAVFGKLDDDVIER 77
Query: 259 L 261
+
Sbjct: 78 V 78
>UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2;
Thermoproteaceae|Rep: 30S ribosomal protein S13P -
Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)
Length = 152
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +3
Query: 297 PDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 461
P WFLNR+KD G+ L S L + D++ +KK+++ +G+RH GL+VRGQ
Sbjct: 75 PAWFLNRRKDPETGRDMHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVRGQ 129
Score = 39.9 bits (89), Expect = 0.040
Identities = 19/66 (28%), Positives = 37/66 (56%)
Frame = +1
Query: 94 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKLSLSC 273
I+R+ +T+++G ++V +A+ I+G+G + + K ID G EE++ KL +
Sbjct: 8 IVRVGDTDLEGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAVLGALPEEQINKLDWAV 67
Query: 274 RILGSI 291
R L +
Sbjct: 68 RNLHEV 73
>UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S13P -
Nanoarchaeum equitans
Length = 153
Score = 52.4 bits (120), Expect = 7e-06
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = +3
Query: 255 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 434
K+ + NP +Y IP W NR++D GK L ++ + D++R +I + RG RH
Sbjct: 67 KLEDALRNPWKYGIPSWLYNRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRGYRH 126
Query: 435 YWGLRVRGQ 461
GL VRGQ
Sbjct: 127 REGLPVRGQ 135
Score = 34.3 bits (75), Expect = 2.0
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +1
Query: 94 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKLSLSC 273
I+ I + ++DG + + + + GV +++ V ID ++ G ++EE+EKL +
Sbjct: 13 IVHIADVDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDAL 72
Query: 274 R 276
R
Sbjct: 73 R 73
>UniRef50_Q00VP7 Cluster: Chromosome 14 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 14 contig 1, DNA
sequence - Ostreococcus tauri
Length = 272
Score = 49.2 bits (112), Expect = 7e-05
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = -2
Query: 464 VLTTHTKAPVMSHPSVSANLLEPLQIFTEF*IQVGGGQLAVFTINNILLPI*EPVWYLIL 285
VLTT T APV+S SV +NLL+ L++ + +++ G L I I+L + EP+ L
Sbjct: 44 VLTTDTDAPVVSQTSVVSNLLQTLEVVAQLRVELVGHHLRELAILEIVLAVQEPIRNSEL 103
Query: 284 PRIRHD 267
R+ HD
Sbjct: 104 SRVGHD 109
>UniRef50_A7PUB9 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 48
Score = 48.8 bits (111), Expect = 9e-05
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +3
Query: 51 LNQNVAGHSRQISTYSSYHEYEHRWQTQGYVCDDGYQRCWP 173
L+ +V G R IST++S ++E RW+T+ +VC D +QR WP
Sbjct: 5 LSMSVLGSERGISTHTSCAQHERRWETEDHVCSDLHQRYWP 45
>UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14;
Bacteria|Rep: 30S ribosomal protein S13 - Thermotoga
maritima
Length = 125
Score = 48.8 bits (111), Expect = 9e-05
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +1
Query: 100 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKLS 264
RI+ + +KV A+T I G+GR S +LK ID +KR G+ T+EE+ K++
Sbjct: 3 RIVGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGIDPEKRVGDLTDEEISKIT 57
Score = 32.7 bits (71), Expect = 6.1
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 366 LDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 461
L S++ ++ RL +I +RG+RH GL VRGQ
Sbjct: 70 LRSEVERNIRRLIEIGCYRGIRHKLGLPVRGQ 101
>UniRef50_A6SEJ9 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 319
Score = 38.3 bits (85), Expect = 0.12
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = -2
Query: 320 LPI*EPVWYLILPRIRHDSDNFSTSSSVHSPARLSRSMSAFLRTMLEYLRPTPLIAVI 147
LP+ P Y++ P + D F SSS H RLSR S +YLR P++ I
Sbjct: 154 LPLALPSVYILSPHPFPEVDTFVASSSAHYHLRLSRYASPMKEAFTQYLRDHPVVKAI 211
>UniRef50_Q6UVP6 Cluster: Ribosomal protein S13; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein S13 -
Pseudendoclonium akinetum (Green alga)
Length = 119
Score = 35.9 bits (79), Expect = 0.65
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 103 IMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKLSLSCRIL 282
++ +N+ + FA+ AI GVG++ + V I+ R E ++E L+ SCR L
Sbjct: 3 LLGSNVSENKAAFFALQAIYGVGQKSAAAVCNLVGINPQTRLRELNSTQLELLTKSCRRL 62
>UniRef50_A6RYD3 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 82
Score = 35.9 bits (79), Expect = 0.65
Identities = 14/35 (40%), Positives = 26/35 (74%)
Frame = +3
Query: 360 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 464
+ L +L++++ER++ + ++RG RH GL VRGQ+
Sbjct: 5 TELKRRLQDNIERMRTMGSYRGRRHAMGLPVRGQN 39
>UniRef50_UPI00004999F3 Cluster: hypothetical protein 23.t00039;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 23.t00039 - Entamoeba histolytica HM-1:IMSS
Length = 592
Score = 35.5 bits (78), Expect = 0.86
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
Frame = -2
Query: 410 NLLEPLQIFTEF*IQVGGGQLAVFTINNIL-LPI*EPVWYLILPRIRHDS-----DNFST 249
NL + LQ T F I G F I +L L I P+ IL I +S +++
Sbjct: 312 NLYQQLQYSTHFYIPSGLTSYINFPIIILLILAITAPIILFILISIIPESICYIFKSYTD 371
Query: 248 SSSVHSPARLSRSMSAFLRTMLEYLRPTPLIAV----IANITLRLPSMFVF 108
SSS SP +L FL T E PT + V I + TL +P +F+F
Sbjct: 372 SSSKSSPKQLMVLSDIFLSTKTEISHPTTIYLVIFYFILSTTLYIPYLFLF 422
>UniRef50_Q7PY55 Cluster: ENSANGP00000013280; n=4;
Endopterygota|Rep: ENSANGP00000013280 - Anopheles
gambiae str. PEST
Length = 183
Score = 35.5 bits (78), Expect = 0.86
Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +1
Query: 118 IDGKRKVMFAMTAIKGVGRRYSNIVLK---KADI-DLDKRAGECTEEEVEK 258
+D K KV A G+GR +S +LK K I DLD AGE T EE+EK
Sbjct: 1 MDLKNKVALVTGAATGLGRAFSEELLKHGAKVVICDLDSDAGELTVEELEK 51
>UniRef50_P46747 Cluster: Mitochondrial ribosomal protein S13; n=1;
Prototheca wickerhamii|Rep: Mitochondrial ribosomal
protein S13 - Prototheca wickerhamii
Length = 119
Score = 35.5 bits (78), Expect = 0.86
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 354 TSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 461
T S++ R++++RL I ++RG RH GL VRGQ
Sbjct: 66 TGSDVRRFTRQNIQRLVNIHSYRGYRHIQGLPVRGQ 101
>UniRef50_Q601J1 Cluster: 30S ribosomal protein S13; n=3; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S13 -
Mycoplasma hyopneumoniae (strain 232)
Length = 137
Score = 35.5 bits (78), Expect = 0.86
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +3
Query: 354 TSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 461
T +L +++ +++RL +I+ +RG+RH GL VRGQ
Sbjct: 78 TEGDLHREVQSNIKRLIEIKCYRGIRHRKGLPVRGQ 113
>UniRef50_Q4WP11 Cluster: 40S ribosomal protein S13; n=5;
Eurotiomycetidae|Rep: 40S ribosomal protein S13 -
Aspergillus fumigatus (Sartorya fumigata)
Length = 169
Score = 34.7 bits (76), Expect = 1.5
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 360 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 461
++L ++ +D++RLK+ ++RG RH GL VRGQ
Sbjct: 103 NDLRRQILDDIKRLKESGSYRGRRHALGLPVRGQ 136
>UniRef50_A1CXK9 Cluster: 40S ribosomal protein S13; n=7;
Pezizomycotina|Rep: 40S ribosomal protein S13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 118
Score = 34.7 bits (76), Expect = 1.5
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 360 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 461
++L ++ +D++RLK+ ++RG RH GL VRGQ
Sbjct: 66 NDLRRQILDDIKRLKESGSYRGRRHALGLPVRGQ 99
>UniRef50_Q2C992 Cluster: Putative uncharacterized protein; n=5;
Vibrionaceae|Rep: Putative uncharacterized protein -
Photobacterium sp. SKA34
Length = 837
Score = 34.3 bits (75), Expect = 2.0
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 9 GGAALELVD--PPRLQLNQNVAGHSRQISTYSSYHEYEHRWQTQGYVCDDGYQRCWPEV 179
G L+ D P R+QL + + + T SS + Q+ GY CDDG +C P V
Sbjct: 636 GEVLLKFTDTVPERVQLRGTITRPNGNVVTSSSREIVFYDRQSGGYPCDDGSYKCLPVV 694
>UniRef50_Q0QIP8 Cluster: Ribosomal protein S13; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S13 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 117
Score = 34.3 bits (75), Expect = 2.0
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 375 KLREDLERLKKIRAHRGMRHYWGLRVRGQ 461
K RE+++RL +I ++RG RH GL RGQ
Sbjct: 72 KKRENIQRLVRISSYRGFRHTAGLPCRGQ 100
>UniRef50_Q5B4R2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 130
Score = 34.3 bits (75), Expect = 2.0
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 360 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 461
++L ++ +D++RLK+ +RG RH GL VRGQ
Sbjct: 65 NDLRRQVLDDIKRLKETGTYRGRRHALGLPVRGQ 98
>UniRef50_A6PT06 Cluster: Ribosomal protein S13; n=1; Victivallis
vadensis ATCC BAA-548|Rep: Ribosomal protein S13 -
Victivallis vadensis ATCC BAA-548
Length = 131
Score = 33.9 bits (74), Expect = 2.6
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 351 LTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 461
L +L L D+ RL++I +RG+RH L VRGQ
Sbjct: 65 LVEGDLRRTLAADIRRLQQINCYRGIRHRRSLPVRGQ 101
>UniRef50_O59772 Cluster: Mitochondrial ribosomal protein subunit
S37; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S37 - Schizosaccharomyces
pombe (Fission yeast)
Length = 151
Score = 33.9 bits (74), Expect = 2.6
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 387 DLERLKKIRAHRGMRHYWGLRVRGQH 464
D+ RL IR +RGMRH GL V GQ+
Sbjct: 76 DISRLVNIRCYRGMRHVNGLPVNGQN 101
>UniRef50_O66486 Cluster: 30S ribosomal protein S13; n=28; cellular
organisms|Rep: 30S ribosomal protein S13 - Aquifex
aeolicus
Length = 126
Score = 33.9 bits (74), Expect = 2.6
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +3
Query: 309 LNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 461
LN + +D Y +L +++ ++++LK + +RG+RH GL VRGQ
Sbjct: 53 LNTLRKFIDENYK--VEGDLRREVQLNIKKLKDMGCYRGIRHARGLPVRGQ 101
>UniRef50_A5FGA8 Cluster: DNA-(Apurinic or apyrimidinic site) lyase;
n=1; Flavobacterium johnsoniae UW101|Rep: DNA-(Apurinic
or apyrimidinic site) lyase - Flavobacterium johnsoniae
UW101
Length = 216
Score = 33.5 bits (73), Expect = 3.5
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +1
Query: 76 PDKFQHILRIMNT--NIDGKRKVMFAMTAIKGVGRRYSNIVLKKAD 207
P K Q +L I +T N + M +TA+KG+GR+ +N++L++ +
Sbjct: 87 PTKAQWLLEIAHTIQNDNDIPLTMSGLTALKGIGRKSANVILRETE 132
>UniRef50_Q9TCB7 Cluster: Ribosomal protein S13; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein S13 - Nephroselmis
olivacea
Length = 125
Score = 33.5 bits (73), Expect = 3.5
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 345 SQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 461
S +T S L +++D+ RL I +RG R+ L VRGQ
Sbjct: 63 SYVTGSKLKRTIQQDMSRLISISCYRGFRYIQKLPVRGQ 101
>UniRef50_O21258 Cluster: Ribosomal protein S13; n=1; Reclinomonas
americana|Rep: Ribosomal protein S13 - Reclinomonas
americana
Length = 122
Score = 33.1 bits (72), Expect = 4.6
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 351 LTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 461
L S L +++RL I+++RG+RH +GL V GQ
Sbjct: 65 LIESELRKNQTYNIKRLLDIKSYRGLRHAYGLPVHGQ 101
>UniRef50_Q6CFI9 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=2;
Saccharomycetales|Rep: Yarrowia lipolytica chromosome B
of strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 156
Score = 33.1 bits (72), Expect = 4.6
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 360 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 461
S+L K+ D+ER +K ++ G RH G+ V+GQ
Sbjct: 70 SDLAKKINADIERKRKTGSYVGRRHVMGMPVKGQ 103
>UniRef50_Q8W9S0 Cluster: Ribosomal protein S13; n=1; Mesostigma
viride|Rep: Ribosomal protein S13 - Mesostigma viride
Length = 116
Score = 32.7 bits (71), Expect = 6.1
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 366 LDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 461
L +++ + ERL KI ++RG RH+ GL RGQ
Sbjct: 72 LINRIHLNKERLIKISSYRGFRHHRGLPARGQ 103
>UniRef50_Q5NQ42 Cluster: 30S ribosomal protein S13; n=107; cellular
organisms|Rep: 30S ribosomal protein S13 - Zymomonas
mobilis
Length = 122
Score = 32.7 bits (71), Expect = 6.1
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +3
Query: 255 KIITIMSNPRQYKIPDWFLNRQ---KDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 425
KI+T + + ++ D N ++ +D Y+ +L ++ +++RL + +RG
Sbjct: 32 KIVTKLGIAPERRVQDLSDNEVLQIREAIDADYT--VEGDLRRQVAMNIKRLMDLACYRG 89
Query: 426 MRHYWGLRVRGQ 461
+RH GL VRGQ
Sbjct: 90 LRHRKGLPVRGQ 101
>UniRef50_A1L3M1 Cluster: LOC100037042 protein; n=1; Xenopus
laevis|Rep: LOC100037042 protein - Xenopus laevis
(African clawed frog)
Length = 384
Score = 32.3 bits (70), Expect = 8.1
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 261 ITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLK 404
+ I ++ KIPD LN + V +S+ + N +S+L+ D +R+K
Sbjct: 6 VGIHKEEQEQKIPDPLLNGDAEDVPQHFSETPTCNTESRLQADQQRIK 53
>UniRef50_Q7QRY8 Cluster: GLP_549_7513_8304; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_549_7513_8304 - Giardia lamblia ATCC
50803
Length = 263
Score = 32.3 bits (70), Expect = 8.1
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -1
Query: 228 STLVKINVGFFENNVGVPPANTFDSRHRKHNLAFAIDVRIHDTKNMLKFV-WNDQRH 61
S V +NVGF E N+G N +S A+DV + T+ + V ND+ H
Sbjct: 108 SAFVNVNVGFLEGNIGKAAPNPLNSDKGTLKYDLALDVCVKHTQEVPVVVGLNDRCH 164
>UniRef50_A0DQX8 Cluster: Chromosome undetermined scaffold_6, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_6,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 566
Score = 32.3 bits (70), Expect = 8.1
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +1
Query: 238 TEEEVEKLSLSCRILGSIRYQ 300
TEEE++K SL+C++LGS Y+
Sbjct: 123 TEEEIKKYSLTCKVLGSAPYK 143
>UniRef50_P42732 Cluster: 30S ribosomal protein S13, chloroplast
precursor; n=6; cellular organisms|Rep: 30S ribosomal
protein S13, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 32.3 bits (70), Expect = 8.1
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +3
Query: 390 LERLKKIRAHRGMRHYWGLRVRGQ 461
++RLK+I+ +RG+RH GL RGQ
Sbjct: 122 IKRLKEIQCYRGVRHIQGLPCRGQ 145
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,406,159
Number of Sequences: 1657284
Number of extensions: 10641086
Number of successful extensions: 31845
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 30916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31839
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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