Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00197
         (564 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    25   0.45 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    25   0.59 
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    25   0.59 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.3  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   9.6  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    21   9.6  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 259 IFQPLLLCIRQHACQDQCRLF 197
           +F  +L  + +HAC + CR+F
Sbjct: 265 VFNTVLELMPKHACSEYCRVF 285


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 24.6 bits (51), Expect = 0.59
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +3

Query: 27  LVDPPRLQLNQNVAGHSRQISTYSSYHEYEHRWQTQGYVCDDG 155
           L  P R+++  ++    RQ+  +      +H+ QT G   DDG
Sbjct: 29  LCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLGKQGDDG 71


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 24.6 bits (51), Expect = 0.59
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +3

Query: 27  LVDPPRLQLNQNVAGHSRQISTYSSYHEYEHRWQTQGYVCDDG 155
           L  P R+++  ++    RQ+  +      +H+ QT G   DDG
Sbjct: 160 LCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLGKQGDDG 202


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 66   AGHSRQISTYSSYHEYEHRWQTQGY-VCDDGYQRCWP 173
            AG   + + + +Y+E  H  +TQG+ V  D  +R  P
Sbjct: 1667 AGEYTRAAGFLAYYEICHNIKTQGWTVVQDPNRRMGP 1703



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 6/21 (28%), Positives = 10/21 (47%)
 Frame = +3

Query: 108  EYEHRWQTQGYVCDDGYQRCW 170
            ++  +W   G   D  Y +CW
Sbjct: 1505 QFLEKWNFDGLDLDWEYPKCW 1525


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 42  RLQLNQNVAGHSRQISTYSSY 104
           RLQ N  ++ HS++I   ++Y
Sbjct: 683 RLQANDELSAHSKEIRGENTY 703


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 42  RLQLNQNVAGHSRQISTYSSY 104
           RLQ N  ++ HS++I   ++Y
Sbjct: 683 RLQANDELSAHSKEIRGENTY 703


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 342 IYHQQYPFAYLGTSLVSYT 286
           + HQ+  F+ LG  +V YT
Sbjct: 347 LLHQKVQFSVLGFFVVDYT 365


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 330 QYPFAYLGTSLVSY 289
           Q P+ Y GT+ VSY
Sbjct: 303 QVPYKYDGTNWVSY 316


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 199 KADIDLDKRAGECTEEEVEK 258
           K DI  DK+A +    EVEK
Sbjct: 77  KKDIRADKKALQKLRREVEK 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,375
Number of Sequences: 336
Number of extensions: 2805
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)