Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00197
         (564 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal prot...   139   2e-33
BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p pro...   139   2e-33
AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p pro...   139   2e-33
AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB...   139   2e-33
AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA...   139   2e-33
BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p pro...    69   3e-12
BT016037-1|AAV36922.1|  447|Drosophila melanogaster LP23579p pro...    28   7.6  
AE014298-2418|AAF48619.1|  454|Drosophila melanogaster CG9903-PA...    28   7.6  

>L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal protein
           S18 protein.
          Length = 152

 Score =  139 bits (337), Expect = 2e-33
 Identities = 59/70 (84%), Positives = 68/70 (97%)
 Frame = +3

Query: 255 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 434
           K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RH
Sbjct: 66  KVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRH 125

Query: 435 YWGLRVRGQH 464
           YWGLRVRGQH
Sbjct: 126 YWGLRVRGQH 135



 Score =  126 bits (305), Expect = 2e-29
 Identities = 60/67 (89%), Positives = 64/67 (95%)
 Frame = +1

Query: 61  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 240
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 241 EEEVEKL 261
           EEEV+K+
Sbjct: 61  EEEVDKV 67


>BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p
           protein.
          Length = 152

 Score =  139 bits (337), Expect = 2e-33
 Identities = 59/70 (84%), Positives = 68/70 (97%)
 Frame = +3

Query: 255 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 434
           K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RH
Sbjct: 66  KVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRH 125

Query: 435 YWGLRVRGQH 464
           YWGLRVRGQH
Sbjct: 126 YWGLRVRGQH 135



 Score =  126 bits (305), Expect = 2e-29
 Identities = 60/67 (89%), Positives = 64/67 (95%)
 Frame = +1

Query: 61  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 240
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 241 EEEVEKL 261
           EEEV+K+
Sbjct: 61  EEEVDKV 67


>AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p
           protein.
          Length = 152

 Score =  139 bits (337), Expect = 2e-33
 Identities = 59/70 (84%), Positives = 68/70 (97%)
 Frame = +3

Query: 255 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 434
           K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RH
Sbjct: 66  KVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRH 125

Query: 435 YWGLRVRGQH 464
           YWGLRVRGQH
Sbjct: 126 YWGLRVRGQH 135



 Score =  123 bits (297), Expect = 1e-28
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = +1

Query: 61  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 240
           MSLVIP+KFQ ILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQRILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 241 EEEVEKL 261
           EEEV+K+
Sbjct: 61  EEEVDKV 67


>AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB,
           isoform B protein.
          Length = 152

 Score =  139 bits (337), Expect = 2e-33
 Identities = 59/70 (84%), Positives = 68/70 (97%)
 Frame = +3

Query: 255 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 434
           K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RH
Sbjct: 66  KVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRH 125

Query: 435 YWGLRVRGQH 464
           YWGLRVRGQH
Sbjct: 126 YWGLRVRGQH 135



 Score =  126 bits (305), Expect = 2e-29
 Identities = 60/67 (89%), Positives = 64/67 (95%)
 Frame = +1

Query: 61  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 240
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 241 EEEVEKL 261
           EEEV+K+
Sbjct: 61  EEEVDKV 67


>AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA,
           isoform A protein.
          Length = 152

 Score =  139 bits (337), Expect = 2e-33
 Identities = 59/70 (84%), Positives = 68/70 (97%)
 Frame = +3

Query: 255 KIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRH 434
           K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RH
Sbjct: 66  KVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRH 125

Query: 435 YWGLRVRGQH 464
           YWGLRVRGQH
Sbjct: 126 YWGLRVRGQH 135



 Score =  126 bits (305), Expect = 2e-29
 Identities = 60/67 (89%), Positives = 64/67 (95%)
 Frame = +1

Query: 61  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 240
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 241 EEEVEKL 261
           EEEV+K+
Sbjct: 61  EEEVDKV 67


>BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p
           protein.
          Length = 246

 Score = 69.3 bits (162), Expect = 3e-12
 Identities = 31/35 (88%), Positives = 34/35 (97%)
 Frame = +1

Query: 157 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKL 261
           IKGVGRRYSNIVLKKAD+DL KRAGECTEEEV+K+
Sbjct: 1   IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKV 35



 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/15 (66%), Positives = 14/15 (93%)
 Frame = +3

Query: 255 KIITIMSNPRQYKIP 299
           K++TI+SNP QYK+P
Sbjct: 34  KVVTIISNPLQYKVP 48


>BT016037-1|AAV36922.1|  447|Drosophila melanogaster LP23579p
           protein.
          Length = 447

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 350 LAVFTINNILLPI*EPVWYLILPRIRHDSDNFS 252
           +A  TIN++L     P+W L+L RI ++ D  +
Sbjct: 237 VATTTINSLLALALLPIWILVLGRILYEDDELT 269


>AE014298-2418|AAF48619.1|  454|Drosophila melanogaster CG9903-PA
           protein.
          Length = 454

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 350 LAVFTINNILLPI*EPVWYLILPRIRHDSDNFS 252
           +A  TIN++L     P+W L+L RI ++ D  +
Sbjct: 244 VATTTINSLLALALLPIWILVLGRILYEDDELT 276


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,157,549
Number of Sequences: 53049
Number of extensions: 520104
Number of successful extensions: 1474
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)