Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00197
         (564 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    27   0.17 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.6  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 291 KIPDWFLNRQKDIVDGKYSQLTSSNLDSKLRED-LERLKKI 410
           KI  WFL++ K+I+D  Y  L +++   +L  D L R K+I
Sbjct: 275 KIDKWFLHKMKNIID-YYLVLENTDHTKQLSHDVLLRAKQI 314


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 318  QKDIVDGKYSQLTSSNLDSKLREDLERLKKIRA 416
            + D  +    QLTSS  +S  + D  +LK IRA
Sbjct: 1781 ESDESESDPDQLTSSRTESSNQLDAGKLKHIRA 1813



 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 185 LEYLRPTPLIAVIANITLRL 126
           L Y+R  P +  +A  TLRL
Sbjct: 519 LPYIRLIPKVTAVAGETLRL 538


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 318  QKDIVDGKYSQLTSSNLDSKLREDLERLKKIRA 416
            + D  +    QLTSS  +S  + D  +LK IRA
Sbjct: 1777 ESDESESDPDQLTSSRTESSNQLDAGKLKHIRA 1809



 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 185 LEYLRPTPLIAVIANITLRL 126
           L Y+R  P +  +A  TLRL
Sbjct: 519 LPYIRLIPKVTAVAGETLRL 538


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 214 DQCRLF*EQCWS 179
           D+C    EQCWS
Sbjct: 829 DECWRLMEQCWS 840


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 214 DQCRLF*EQCWS 179
           D+C    EQCWS
Sbjct: 867 DECWRLMEQCWS 878


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,719
Number of Sequences: 438
Number of extensions: 3358
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)