Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00196
         (659 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    24   0.96 
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   6.8  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   6.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.0  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 332 IIKQINAQSGAHCELDRRCQSNDRNTRTFIIR 427
           ++K I    GA C L+ R   +D N    +++
Sbjct: 126 VLKSIEKHQGAVCHLETRPNQSDNNQLDALVK 157


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 268 DARHLHHPRTQVRPG 312
           D +HL+HP+  + PG
Sbjct: 113 DQQHLYHPQVLLSPG 127


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +1

Query: 211  SRTATGAAWSTDSSRRPTRDARHLHHPRTQVRPGHWQT 324
            S T T   W+T ++RR T          T+    +W T
Sbjct: 1044 SSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPT 1081


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 301 LGSVDGEGDAHLWSVGDCCPYSMPPLS 221
           LG V+G    HL SV    PY   P +
Sbjct: 142 LGKVEGAATHHLGSVYSRHPYESWPFN 168


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 371 ELDRRCQSNDRNTRTFIIRGHP 436
           +LDR  +    N+R F+IRG P
Sbjct: 75  DLDRSLRK--LNSRLFVIRGQP 94


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 610 PDWHQPAASQGPHRQ 654
           PDW     SQ P+R+
Sbjct: 172 PDWEGTTLSQSPNRR 186



 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -1

Query: 653 CRCGPCEAAGWC 618
           C+  PCE  G C
Sbjct: 72  CKVNPCENGGTC 83


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = -1

Query: 659 DTCRCGPCEAAGWC 618
           D C+  PC+  G C
Sbjct: 224 DDCKPNPCQNGGTC 237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,529
Number of Sequences: 336
Number of extensions: 2210
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)