Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00196
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical ... 68 5e-12
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 65 5e-11
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 65 5e-11
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 65 5e-11
U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical pr... 58 7e-09
U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical pr... 48 4e-06
U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 36 0.019
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 36 0.019
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 36 0.019
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 34 0.10
U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical pr... 32 0.31
U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical pr... 32 0.31
U23177-8|AAM22054.1| 409|Caenorhabditis elegans Hypothetical pr... 30 1.3
U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 29 3.9
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 29 3.9
AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned exp... 29 3.9
Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z77667-7|CAB01238.2| 534|Caenorhabditis elegans Hypothetical pr... 28 5.1
L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human nie... 28 6.8
L25598-6|AAA27939.2| 886|Caenorhabditis elegans Hypothetical pr... 27 8.9
>AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical
protein C36E6.1b protein.
Length = 641
Score = 68.1 bits (159), Expect = 5e-12
Identities = 37/76 (48%), Positives = 44/76 (57%)
Frame = +2
Query: 254 ADRPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGH 433
A+ P + I KCGLVIGR G IKQIN +SGAHCEL R +N +TF+IRG
Sbjct: 321 ANAPVVLFYMVIPASKCGLVIGRGGETIKQINQESGAHCELSRDPNTNPIE-KTFVIRGS 379
Query: 434 PEAVETCTRIIMEKVG 481
VE +I KVG
Sbjct: 380 EAQVEHAKHLIRVKVG 395
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = +2
Query: 233 HGVRTAVADRPE-MRVTFTIHGP--KCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDR 403
HG+++ V D+ + ++T I P KCG +IG+ G ++++ +S +C + +N
Sbjct: 142 HGIKSPVVDQGDPSKITIEIPIPANKCGAIIGKGGEQMRKL--RSWTNCNVQLLQDNNIA 199
Query: 404 NT-RTFIIRGHPEAVETCTRIIME 472
+T + I G P+ VE C ++ +
Sbjct: 200 DTVKPLKITGDPKQVEQCRLLVAD 223
Score = 36.3 bits (80), Expect = 0.019
Identities = 17/65 (26%), Positives = 38/65 (58%)
Frame = +3
Query: 3 GKMIKKIQADTGCRVQFNQEHDEEPGDKLCYLQGKPHQLDQARQMIEDLISSVKRCEEDS 182
G+ ++K+++ T C VQ Q+++ K + G P Q++Q R ++ D+++ C +D+
Sbjct: 176 GEQMRKLRSWTNCNVQLLQDNNIADTVKPLKITGDPKQVEQCRLLVADILA----CNDDT 231
Query: 183 RSRAV 197
+ A+
Sbjct: 232 PASAM 236
Score = 35.1 bits (77), Expect = 0.045
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = +2
Query: 305 GLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPEAVETCTRIIMEKV 478
GLVIGR GA ++ I+ +SG C + Q + R I G PE +E I E V
Sbjct: 67 GLVIGRNGAEVQAISQKSG--CRVQVTVQPSSTGFRLVEIYGIPENIERAKAYISEVV 122
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/52 (25%), Positives = 30/52 (57%)
Frame = +3
Query: 3 GKMIKKIQADTGCRVQFNQEHDEEPGDKLCYLQGKPHQLDQARQMIEDLISS 158
GK IKK+ +TG ++QF + D + ++ + G +++ Q+I+ ++ +
Sbjct: 265 GKNIKKLSDETGTKIQFLPDDDPKLMERSLAIIGNKNKVYVCAQLIKAIVEA 316
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 64.9 bits (151), Expect = 5e-11
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +2
Query: 221 RQGRHG-VRTAVADRPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSN 397
+QG G V A+ ++ KCGLVIG+ G IKQIN++SGAHCEL R N
Sbjct: 260 QQGGGGNVAGAMVSNEASTFYMSVPAAKCGLVIGKGGETIKQINSESGAHCELSRDPTGN 319
Query: 398 DRNTRTFIIRGHPEAVETCTRIIMEKVG 481
+ + F+I+G A+E +I KVG
Sbjct: 320 -ADEKVFVIKGGKRAIEHAKHLIRIKVG 346
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +2
Query: 260 RPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPE 439
R + + I +CGL+IG+ G I+Q+ +SG L + QS ++ I G P+
Sbjct: 89 RAQTTIDIAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSKPLRITGDPQ 148
Query: 440 AVETCTRIIME 472
+E +++ E
Sbjct: 149 KIELAKQLVAE 159
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +3
Query: 3 GKMIKKIQADTGCRVQFNQEHDEEPGDKLCYLQGKPHQLDQARQMIEDLIS 155
G I+ IQA GCRVQ + + D G ++ L+G ++ A+ +I ++++
Sbjct: 26 GSEIQGIQAKAGCRVQMSPDADPSSGVRMVTLEGSRSNVETAKHLINEVVA 76
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 3 GKMIKKIQADTGCRVQFNQEHDEEPGDKLCYLQGKPHQLDQARQMIEDLI 152
G IK++ +TG ++QF + D ++ + G Q+ +A + I +L+
Sbjct: 205 GDTIKRLAMETGTKIQFKPDDDPSTPERCAVIMGTRDQIYRATERITELV 254
Score = 31.9 bits (69), Expect = 0.41
Identities = 22/83 (26%), Positives = 35/83 (42%)
Frame = +2
Query: 257 DRPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHP 436
D + + I G+VIGR G+ I+ I A++G ++ + R + G
Sbjct: 3 DNEAVNEKYPIPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDADPSS-GVRMVTLEGSR 61
Query: 437 EAVETCTRIIMEKVGGPVNFIPE 505
VET +I E V N P+
Sbjct: 62 SNVETAKHLINEVVARSQNPRPQ 84
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 64.9 bits (151), Expect = 5e-11
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +2
Query: 221 RQGRHG-VRTAVADRPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSN 397
+QG G V A+ ++ KCGLVIG+ G IKQIN++SGAHCEL R N
Sbjct: 323 QQGGGGNVAGAMVSNEASTFYMSVPAAKCGLVIGKGGETIKQINSESGAHCELSRDPTGN 382
Query: 398 DRNTRTFIIRGHPEAVETCTRIIMEKVG 481
+ + F+I+G A+E +I KVG
Sbjct: 383 -ADEKVFVIKGGKRAIEHAKHLIRIKVG 409
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +2
Query: 260 RPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPE 439
R + + I +CGL+IG+ G I+Q+ +SG L + QS ++ I G P+
Sbjct: 152 RAQTTIDIAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSKPLRITGDPQ 211
Query: 440 AVETCTRIIME 472
+E +++ E
Sbjct: 212 KIELAKQLVAE 222
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +3
Query: 3 GKMIKKIQADTGCRVQFNQEHDEEPGDKLCYLQGKPHQLDQARQMIEDLIS 155
G I+ IQA GCRVQ + + D G ++ L+G ++ A+ +I ++++
Sbjct: 89 GSEIQGIQAKAGCRVQMSPDADPSSGVRMVTLEGSRSNVETAKHLINEVVA 139
Score = 33.9 bits (74), Expect = 0.10
Identities = 25/99 (25%), Positives = 41/99 (41%)
Frame = +2
Query: 209 PAERRQGRHGVRTAVADRPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRC 388
PA+R + + D + + I G+VIGR G+ I+ I A++G ++
Sbjct: 50 PAKRPADDTDLNPFMDDNEAVNEKYPIPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDA 109
Query: 389 QSNDRNTRTFIIRGHPEAVETCTRIIMEKVGGPVNFIPE 505
+ R + G VET +I E V N P+
Sbjct: 110 DPSS-GVRMVTLEGSRSNVETAKHLINEVVARSQNPRPQ 147
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 3 GKMIKKIQADTGCRVQFNQEHDEEPGDKLCYLQGKPHQLDQARQMIEDLI 152
G IK++ +TG ++QF + D ++ + G Q+ +A + I +L+
Sbjct: 268 GDTIKRLAMETGTKIQFKPDDDPSTPERCAVIMGTRDQIYRATERITELV 317
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 64.9 bits (151), Expect = 5e-11
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +2
Query: 221 RQGRHG-VRTAVADRPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSN 397
+QG G V A+ ++ KCGLVIG+ G IKQIN++SGAHCEL R N
Sbjct: 301 QQGGGGNVAGAMVSNEASTFYMSVPAAKCGLVIGKGGETIKQINSESGAHCELSRDPTGN 360
Query: 398 DRNTRTFIIRGHPEAVETCTRIIMEKVG 481
+ + F+I+G A+E +I KVG
Sbjct: 361 -ADEKVFVIKGGKRAIEHAKHLIRIKVG 387
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +2
Query: 260 RPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPE 439
R + + I +CGL+IG+ G I+Q+ +SG L + QS ++ I G P+
Sbjct: 130 RAQTTIDIAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSKPLRITGDPQ 189
Query: 440 AVETCTRIIME 472
+E +++ E
Sbjct: 190 KIELAKQLVAE 200
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +3
Query: 3 GKMIKKIQADTGCRVQFNQEHDEEPGDKLCYLQGKPHQLDQARQMIEDLIS 155
G I+ IQA GCRVQ + + D G ++ L+G ++ A+ +I ++++
Sbjct: 67 GSEIQGIQAKAGCRVQMSPDADPSSGVRMVTLEGSRSNVETAKHLINEVVA 117
Score = 33.9 bits (74), Expect = 0.10
Identities = 25/99 (25%), Positives = 41/99 (41%)
Frame = +2
Query: 209 PAERRQGRHGVRTAVADRPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRC 388
PA+R + + D + + I G+VIGR G+ I+ I A++G ++
Sbjct: 28 PAKRPADDTDLNPFMDDNEAVNEKYPIPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDA 87
Query: 389 QSNDRNTRTFIIRGHPEAVETCTRIIMEKVGGPVNFIPE 505
+ R + G VET +I E V N P+
Sbjct: 88 DPSS-GVRMVTLEGSRSNVETAKHLINEVVARSQNPRPQ 125
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 3 GKMIKKIQADTGCRVQFNQEHDEEPGDKLCYLQGKPHQLDQARQMIEDLI 152
G IK++ +TG ++QF + D ++ + G Q+ +A + I +L+
Sbjct: 246 GDTIKRLAMETGTKIQFKPDDDPSTPERCAVIMGTRDQIYRATERITELV 295
>U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical
protein M01A10.1 protein.
Length = 680
Score = 57.6 bits (133), Expect = 7e-09
Identities = 33/76 (43%), Positives = 41/76 (53%)
Frame = +2
Query: 254 ADRPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGH 433
A+ P I KCGLVIGR G I+QIN +SGA+CE+ R S + F+IRG
Sbjct: 406 ANTPISLFYMLIPASKCGLVIGRGGETIRQINKESGAYCEMSRD-PSISAIEKQFVIRGS 464
Query: 434 PEAVETCTRIIMEKVG 481
VE +I KVG
Sbjct: 465 ETQVEHAKHLIRVKVG 480
Score = 32.7 bits (71), Expect = 0.24
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +2
Query: 269 MRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPEAVE 448
++ + +I GLVIGR G I+ I+ +SG C + + + R+ I G E +E
Sbjct: 146 IKASVSIPEESVGLVIGRNGVEIQAISQKSG--CRVQIVAEPSTTGYRSVDIYGISENIE 203
Query: 449 TCTRIIMEKV 478
++I E V
Sbjct: 204 VAKKLINEVV 213
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/80 (22%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 248 AVADRPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNT-RTFII 424
AV++ ++ + I KCG +IG++G ++++ +S +C+ ++N ++ + I
Sbjct: 236 AVSNSSKVTIIIPIPANKCGAIIGKKGEQMRKL--RSWTNCDFILIQENNIADSVKPLQI 293
Query: 425 RGHPEAVETCTRIIMEKVGG 484
G P+ VE ++ + + G
Sbjct: 294 TGQPKEVEHAKALVADILDG 313
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/56 (21%), Positives = 30/56 (53%)
Frame = +3
Query: 3 GKMIKKIQADTGCRVQFNQEHDEEPGDKLCYLQGKPHQLDQARQMIEDLISSVKRC 170
G+ ++K+++ T C QE++ K + G+P +++ A+ ++ D++ C
Sbjct: 262 GEQMRKLRSWTNCDFILIQENNIADSVKPLQITGQPKEVEHAKALVADILDGFDEC 317
>U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical
protein ZK418.9b protein.
Length = 510
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +2
Query: 281 FTIHGP--KCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPEAVETC 454
F +H P KCGLVIG+ G IKQI ++GA C L + + + + F I+G +
Sbjct: 287 FYMHVPAGKCGLVIGKGGENIKQIERETGATCGLAPAAEQKNEDEKVFEIKGSQLQIHHA 346
Query: 455 TRIIMEKVG 481
+ ++ KVG
Sbjct: 347 SHLVRIKVG 355
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +3
Query: 3 GKMIKKIQADTGCRVQFNQEHDEEPGDKLCYLQGKPHQLDQARQMIEDLIS 155
G I+ IQ +GCRVQ + +H G + C ++G P Q+ ARQMI +I+
Sbjct: 26 GSEIRLIQQTSGCRVQMDPDHQSVNGFRNCTIEGPPDQVAVARQMITQVIN 76
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/51 (27%), Positives = 32/51 (62%)
Frame = +3
Query: 3 GKMIKKIQADTGCRVQFNQEHDEEPGDKLCYLQGKPHQLDQARQMIEDLIS 155
G+MIK++ A+TG ++QF + + D++ + G Q+ +A + I ++++
Sbjct: 212 GEMIKRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRATERITEIVN 262
Score = 32.7 bits (71), Expect = 0.24
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 266 EMRVTFTIHGPKCGLVIGRRGAIIKQINAQSG-AHCELDRRCQSNDRNTRTFIIRGHPEA 442
E+ I K GLVIG+ G I+ + QSG +C + + + + + G P A
Sbjct: 90 EVTEEMLIPADKIGLVIGKGGETIRIVQEQSGLRNCNVVQETTTATGQPKPLRMIGSPAA 149
Query: 443 VETCTRII 466
+ET ++
Sbjct: 150 IETAKALV 157
Score = 31.5 bits (68), Expect = 0.55
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 305 GLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPEAVETCTRIIMEKV 478
GLVIG+ G+ I+ I SG ++D QS + R I G P+ V ++I + +
Sbjct: 19 GLVIGKGGSEIRLIQQTSGCRVQMDPDHQSVN-GFRNCTIEGPPDQVAVARQMITQVI 75
>U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical
protein ZK418.9a protein.
Length = 557
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +2
Query: 281 FTIHGP--KCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPEAVETC 454
F +H P KCGLVIG+ G IKQI ++GA C L + + + + F I+G +
Sbjct: 334 FYMHVPAGKCGLVIGKGGENIKQIERETGATCGLAPAAEQKNEDEKVFEIKGSQLQIHHA 393
Query: 455 TRIIMEKVG 481
+ ++ KVG
Sbjct: 394 SHLVRIKVG 402
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +3
Query: 3 GKMIKKIQADTGCRVQFNQEHDEEPGDKLCYLQGKPHQLDQARQMIEDLIS 155
G I+ IQ +GCRVQ + +H G + C ++G P Q+ ARQMI +I+
Sbjct: 73 GSEIRLIQQTSGCRVQMDPDHQSVNGFRNCTIEGPPDQVAVARQMITQVIN 123
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/51 (27%), Positives = 32/51 (62%)
Frame = +3
Query: 3 GKMIKKIQADTGCRVQFNQEHDEEPGDKLCYLQGKPHQLDQARQMIEDLIS 155
G+MIK++ A+TG ++QF + + D++ + G Q+ +A + I ++++
Sbjct: 259 GEMIKRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRATERITEIVN 309
Score = 32.7 bits (71), Expect = 0.24
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 266 EMRVTFTIHGPKCGLVIGRRGAIIKQINAQSG-AHCELDRRCQSNDRNTRTFIIRGHPEA 442
E+ I K GLVIG+ G I+ + QSG +C + + + + + G P A
Sbjct: 137 EVTEEMLIPADKIGLVIGKGGETIRIVQEQSGLRNCNVVQETTTATGQPKPLRMIGSPAA 196
Query: 443 VETCTRII 466
+ET ++
Sbjct: 197 IETAKALV 204
Score = 31.5 bits (68), Expect = 0.55
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 305 GLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPEAVETCTRIIMEKV 478
GLVIG+ G+ I+ I SG ++D QS + R I G P+ V ++I + +
Sbjct: 66 GLVIGKGGSEIRLIQQTSGCRVQMDPDHQSVN-GFRNCTIEGPPDQVAVARQMITQVI 122
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 36.3 bits (80), Expect = 0.019
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +2
Query: 260 RPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPE 439
R E TI VIG+ G+ + + +GA E+++ +SN + RT + +G PE
Sbjct: 1791 RNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQESNKQAERTVLAKGTPE 1850
Query: 440 AVETCTRII 466
V II
Sbjct: 1851 MVRYAMNII 1859
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 36.3 bits (80), Expect = 0.019
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +2
Query: 260 RPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPE 439
R E TI VIG+ G+ + + +GA E+++ +SN + RT + +G PE
Sbjct: 1791 RNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQESNKQAERTVLAKGTPE 1850
Query: 440 AVETCTRII 466
V II
Sbjct: 1851 MVRYAMNII 1859
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 36.3 bits (80), Expect = 0.019
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +2
Query: 260 RPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPE 439
R E TI VIG+ G+ + + +GA E+++ +SN + RT + +G PE
Sbjct: 612 RNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQESNKQAERTVLAKGTPE 671
Query: 440 AVETCTRII 466
V II
Sbjct: 672 MVRYAMNII 680
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 36.3 bits (80), Expect = 0.019
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +2
Query: 260 RPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPE 439
R E TI VIG+ G+ + + +GA E+++ +SN + RT + +G PE
Sbjct: 612 RNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQESNKQAERTVLAKGTPE 671
Query: 440 AVETCTRII 466
V II
Sbjct: 672 MVRYAMNII 680
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 36.3 bits (80), Expect = 0.019
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +2
Query: 260 RPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPE 439
R E TI VIG+ G+ + + +GA E+++ +SN + RT + +G PE
Sbjct: 1791 RNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQESNKQAERTVLAKGTPE 1850
Query: 440 AVETCTRII 466
V II
Sbjct: 1851 MVRYAMNII 1859
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 36.3 bits (80), Expect = 0.019
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +2
Query: 260 RPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPE 439
R E TI VIG+ G+ + + +GA E+++ +SN + RT + +G PE
Sbjct: 1791 RNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQESNKQAERTVLAKGTPE 1850
Query: 440 AVETCTRII 466
V II
Sbjct: 1851 MVRYAMNII 1859
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/66 (24%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +3
Query: 3 GKMIKKIQADTGCRVQFNQEHDEEPG--DKLCYLQGKPHQLDQARQMIEDLISSVKRCEE 176
G+ ++ ++ D CRVQ ++ + PG +++C ++G+ + + + I+D I ++C +
Sbjct: 61 GEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKGRLNNIMAVIESIQDKIR--EKCAD 118
Query: 177 DSRSRA 194
S A
Sbjct: 119 QGGSDA 124
>U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical
protein F26B1.2c protein.
Length = 380
Score = 32.3 bits (70), Expect = 0.31
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +2
Query: 263 PEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPEA 442
P TI G +IGR G I +I +SGA L+ QSN + R I+G +
Sbjct: 298 PVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLE---QSNGQPERIITIKGTEQQ 354
Query: 443 VETCTRIIMEKV 478
+ + ++ + V
Sbjct: 355 IHSAQYLLQQCV 366
>U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical
protein F26B1.2a protein.
Length = 397
Score = 32.3 bits (70), Expect = 0.31
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +2
Query: 263 PEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPEA 442
P TI G +IGR G I +I +SGA L+ QSN + R I+G +
Sbjct: 315 PVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLE---QSNGQPERIITIKGTEQQ 371
Query: 443 VETCTRIIMEKV 478
+ + ++ + V
Sbjct: 372 IHSAQYLLQQCV 383
>U23177-8|AAM22054.1| 409|Caenorhabditis elegans Hypothetical
protein C56G2.1b protein.
Length = 409
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 3 GKMIKKIQADTGCRVQFNQEH--DEEPGDKLCYLQGKPHQLDQARQMI 140
GK IK++ T R+ Q H D+ ++C ++GK +++ QM+
Sbjct: 90 GKTIKELSVRTNVRMLIRQHHETDKVKTHQICQVRGKRDEINHCLQML 137
>U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical
protein C56G2.1a protein.
Length = 867
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 3 GKMIKKIQADTGCRVQFNQEH--DEEPGDKLCYLQGKPHQLDQARQMI 140
GK IK++ T R+ Q H D+ ++C ++GK +++ QM+
Sbjct: 548 GKTIKELSVRTNVRMLIRQHHETDKVKTHQICQVRGKRDEINHCLQML 595
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 353 QSGAHCELDRRCQSNDRNTRTFIIRGHPEAVETCTRIIMEKVGG 484
Q G +LD R QS+ ++ +I++ PE ++ + I + GG
Sbjct: 2979 QFGKDGQLDMRAQSSSDKSKLYIMQATPEDADSYSCIAVNDAGG 3022
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 353 QSGAHCELDRRCQSNDRNTRTFIIRGHPEAVETCTRIIMEKVGG 484
Q G +LD R QS+ ++ +I++ PE ++ + I + GG
Sbjct: 2979 QFGKDGQLDMRAQSSSDKSKLYIMQATPEDADSYSCIAVNDAGG 3022
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 353 QSGAHCELDRRCQSNDRNTRTFIIRGHPEAVETCTRIIMEKVGG 484
Q G +LD R QS+ ++ +I++ PE ++ + I + GG
Sbjct: 2979 QFGKDGQLDMRAQSSSDKSKLYIMQATPEDADSYSCIAVNDAGG 3022
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 353 QSGAHCELDRRCQSNDRNTRTFIIRGHPEAVETCTRIIMEKVGG 484
Q G +LD R QS+ ++ +I++ PE ++ + I + GG
Sbjct: 2979 QFGKDGQLDMRAQSSSDKSKLYIMQATPEDADSYSCIAVNDAGG 3022
>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical
protein F30H5.3 protein.
Length = 1599
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 364 GSGLSVYLLYDGTTSANDQAALGS-VDGEGDAHLWSVGDCCP 242
G G+ + +YD TS A + + ++G D H S G CCP
Sbjct: 285 GDGIYIADIYDCVTSTTSMANVKTAMEGVYDIHPASDGICCP 326
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 353 QSGAHCELDRRCQSNDRNTRTFIIRGHPEAVETCTRIIMEKVGG 484
Q G +LD R QS+ ++ +I++ PE ++ + I + GG
Sbjct: 2979 QFGKDGQLDMRAQSSSDKSKLYIMQATPEDADSYSCIAVNDAGG 3022
>AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned
expression site protein 4 protein.
Length = 430
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = +2
Query: 260 RPEMRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCELDRRCQSNDRNTRTFIIRGHPE 439
+P + + + +CG +IG+ G+ IK I +GA ++ + R + G +
Sbjct: 150 KPPITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEMLPHS-TERAVTLSGTAD 208
Query: 440 AVETCTRI 463
A+ T +
Sbjct: 209 AINLATSL 216
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 269 MRVTFTIHGPKCGLVIGRRGAIIKQINAQSGAHCEL-DRRC 388
+ + + G + G +IG++G IK+I +SGA + D C
Sbjct: 72 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGSC 112
>Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical
protein F28F8.2 protein.
Length = 618
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1
Query: 217 TATGAAWSTDSSRRPTRDARHLHHPRTQVRPGHWQTWCHHKAN 345
T+T AA ST S PT D+ HL HP V H ++ H +N
Sbjct: 15 TSTHAAPST--SNIPTTDSHHLTHP--SVHRQHTNSYIHGTSN 53
>Z77667-7|CAB01238.2| 534|Caenorhabditis elegans Hypothetical
protein M04B2.5 protein.
Length = 534
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 403 KYKDVYNQRTPRSS*DLYTNHYGESWW 483
K KD+YN RT + D+ N+Y ++++
Sbjct: 36 KEKDIYNDRTEPGNNDVIDNYYAKNYY 62
>L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human
niemann pick c disease)related protein 2 protein.
Length = 1274
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -3
Query: 261 RSATAVRTPCRPCRRSAGPDRVLHGS-DCP 175
R A+ P PC +SAGP G+ DCP
Sbjct: 212 RMKNAMNIPTTPCHKSAGPKVPACGAIDCP 241
>L25598-6|AAA27939.2| 886|Caenorhabditis elegans Hypothetical
protein C06G4.1 protein.
Length = 886
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 18 KIQADTGCRVQFNQEHDEEPGDKLCYLQGKPHQLDQARQMIEDLI 152
+I TGC + F +E + G L+G P + A++MI+D++
Sbjct: 563 EIHYATGCHLIFLEEV-KRGGYTYVELKGDPEHIKNAQKMIDDMV 606
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,774,382
Number of Sequences: 27780
Number of extensions: 227648
Number of successful extensions: 742
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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