Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00195
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    26   0.34 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   4.2  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    22   4.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.2  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   5.6  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   5.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.8  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 477 IHVFFFLIPFSFHRRLRTTLVSIYLCLRIVVLSLST 370
           I   F L+P   H RL   +  +YL    VVLSL +
Sbjct: 13  ISKIFALLPVKKHHRLEKLVPCVYLTSFSVVLSLGS 48


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 43  HFKLXXXXXXQFICPRCPFTSK 108
           H K+      +  CP+CPF ++
Sbjct: 220 HSKVHIREDKRLTCPKCPFITE 241


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 563 CKKYWSCCNQT 595
           C +YW+C N T
Sbjct: 112 CTRYWTCWNGT 122



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +2

Query: 563 CKKYWSCCN 589
           C +YW C N
Sbjct: 42  CDRYWECVN 50


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = +3

Query: 66  LVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATW 182
           L  +++ + SI+++  + LKT+     DKL +  + + W
Sbjct: 104 LYQVFVFRRSIYLQIKERLKTQGISHLDKLQLGQYFSPW 142


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 74  NLSAQDVHSHQRFRRPEDKAGGSRRQARRDR 166
           N   ++ H  +   R   ++GG RRQ R  R
Sbjct: 565 NHMVKNSHYKEHIMRSITESGGRRRQTREKR 595


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = +2

Query: 563 CKKYWSCCNQTIQ 601
           C KYW C N   +
Sbjct: 38  CDKYWKCDNNVAE 50


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = +2

Query: 563 CKKYWSCCNQTIQ 601
           C KYW C N   +
Sbjct: 38  CDKYWKCDNNVAE 50


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 541 KINIFKFITDVKTFFLHLLKTYTCFF 464
           K++  K     K   +HLL+ Y C F
Sbjct: 259 KVDPLKIPEAEKRKLIHLLQEYRCIF 284


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 102 CEWTSWADKLKLKIISQ 52
           C+W   AD+ K K I Q
Sbjct: 517 CDWPEHADREKCKKIEQ 533


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 660 NQIRNTVWVVN 628
           N+IRN  W+VN
Sbjct: 911 NRIRNQRWIVN 921



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 148  TSSS*STSWRPGA 186
            TS S +TSW PG+
Sbjct: 1350 TSVSTTTSWNPGS 1362


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,216
Number of Sequences: 336
Number of extensions: 3139
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)