Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00195
(705 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 52 3e-07
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 50 2e-06
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 48 1e-05
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 39 0.003
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 38 0.006
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 38 0.008
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 37 0.014
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 36 0.042
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.042
SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3) 34 0.098
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 32 0.39
SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093) 32 0.39
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021) 31 0.91
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 31 0.91
SB_17078| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_47047| Best HMM Match : DUF761 (HMM E-Value=3.2) 30 1.6
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0) 30 1.6
SB_10252| Best HMM Match : tRNA-synt_2b (HMM E-Value=3.2e-32) 30 2.1
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 30 2.1
SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019) 29 2.8
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 28 8.5
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +3
Query: 96 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
I ++D + AG +LVVIDF ATWCGPCK I P ++ + D +
Sbjct: 11 IVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKFMDVV 61
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +2
Query: 257 KVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 370
KVDVD+C+ A I +MPTF F N K+DE GA+
Sbjct: 64 KVDVDQCQLTAESCGIRAMPTFHFYHNKAKIDELRGAD 101
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +3
Query: 147 DKLVVIDFMATWCGPCKMIGPKLDEIAAE 233
+++ IDF ATWCGPC+MIGPK +E+A E
Sbjct: 11 NEVAAIDFTATWCGPCRMIGPKFEEMAKE 39
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 48.4 bits (110), Expect = 6e-06
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 102 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 233
I++ + + + DKLVVIDF A WCGPC+ I PK ++A E
Sbjct: 15 IEERAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMALE 58
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 84 PKMSIHIKDSDDLKT-RLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
P+ ++ + + D T L AG KLVV DF A+WCGPCK I P ++ + ++
Sbjct: 5 PRGNVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGLSEKYKQAV 60
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +2
Query: 257 KVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 370
K+DVD C+++A++ + +MPTF F KN K+DE GA+
Sbjct: 63 KIDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGAD 100
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +3
Query: 39 FAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLD 218
+ F V F++ +S + D D + AG +++++F A WCG CK + P+
Sbjct: 519 WTFTQVSAFVLLFVGSTLSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEY- 577
Query: 219 EIAAE 233
E AAE
Sbjct: 578 ETAAE 582
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +3
Query: 150 KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD--SIVVSR 260
K V+I+F A WCG CK + PK +E+ ++ D IV+++
Sbjct: 881 KDVLIEFYAPWCGHCKSLEPKYNELGEKLQDVKDIVIAK 919
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 257 KVDVDEC-EDIASEYNINSMPTFVFVKNGKKLDEFSG 364
KVD E +D S+Y ++ PT +NG+ ++ G
Sbjct: 595 KVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDG 631
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 78 YLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
YLP + + + LA + V+DF A WCGPC PK +++A + +
Sbjct: 430 YLPSIVSEVNSKNFFTDVLAS--EDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGKV 484
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 90 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 233
+S + D D + AG +++++F A WCG CK + P+ E AAE
Sbjct: 11 LSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEY-ETAAE 57
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 132 LAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSD--SIVVSR 260
+A DK V ++F A WCG CK + P D++ + D IVV++
Sbjct: 397 VARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKYKDHADIVVAK 441
Score = 35.9 bits (79), Expect = 0.032
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 135 AEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEM 236
A A +K V+++F A WCG CK + P+ + A ++
Sbjct: 37 AVAANKHVLVEFYAPWCGHCKALAPEYAKAAGQL 70
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 37.1 bits (82), Expect = 0.014
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 144 GDKLVVIDFMATWCGPCKMIGPKLDEI--AAEMSDSIVVSR 260
G+K +++F A WCG CK + P +++ A S +++++
Sbjct: 38 GEKFALVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAK 78
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 36.7 bits (81), Expect = 0.018
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +2
Query: 257 KVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSG 364
KVD+D ++A + +N++PT + +K GK +++F G
Sbjct: 28 KVDIDVMGELAFNFGVNAVPTVIGMKGGKVINKFEG 63
Score = 34.3 bits (75), Expect = 0.098
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 180 WCGPCKMIGPKLDEIAAEMSDSIVVSR 260
WC PCK++ P+LD I AE + +++
Sbjct: 2 WCNPCKVLTPRLDAIIAEQDGKVDLAK 28
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 36.7 bits (81), Expect = 0.018
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3
Query: 147 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM 236
+ L++++F A WCG CK + P+ ++ A E+
Sbjct: 193 ESLMLVEFFAPWCGHCKQLAPEYEKAAQEL 222
Score = 34.3 bits (75), Expect = 0.098
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +3
Query: 93 SIHIKDSDDLKTRLAEAGDK------LVVIDFMATWCGPCKMIGPKLDEIAAEM 236
S +K+ DD+ ++ D+ +++++F A WCG CK + P+ + A +M
Sbjct: 54 SDEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKM 107
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 35.5 bits (78), Expect = 0.042
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 114 DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEM 236
DD A K V++DF A WC CK + P ++A E+
Sbjct: 140 DDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKEL 180
Score = 34.3 bits (75), Expect = 0.098
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 147 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDS 245
++ V++DF A WC C+ + P D A ++ D+
Sbjct: 68 NEYVLVDFYAPWCSDCQRLSPLFDTAALQLRDN 100
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 293 EYNINSMPTFVFVKNGKKLDEFSGAN 370
+YN+ +PT +GK ++EF G N
Sbjct: 208 KYNVKFLPTIYLFHDGKFVEEFEGNN 233
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 35.5 bits (78), Expect = 0.042
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 174 ATWCGPCKMIGPKLDEIAAEMSDSIVVSR 260
A WC PCK++ P+LD I AE + +++
Sbjct: 46 ACWCNPCKVLTPRLDAIIAEQDGKVDLAK 74
Score = 31.9 bits (69), Expect = 0.52
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +2
Query: 257 KVDVDECEDIASEYNINSMPTFVFVKNGKKLD 352
KVD+D ++A + +N++PT + +K GK ++
Sbjct: 74 KVDIDVMGELAFNFGVNAVPTVIGMKGGKVME 105
>SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3)
Length = 222
Score = 34.3 bits (75), Expect = 0.098
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 132 LAEAGDKLVVIDFMATWCGPCKMIGP 209
L E+ K+ +IDF A+WC PC++ P
Sbjct: 172 LKESMGKVTIIDFWASWCQPCRVENP 197
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 32.3 bits (70), Expect = 0.39
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 153 LVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVV 254
L +++F A WCG C+ + P+ + A E+ + V
Sbjct: 99 LWLVEFFAPWCGHCQRLAPEWAKAATELKGKVKV 132
>SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)
Length = 148
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Frame = +3
Query: 123 KTRLAEAGD----KLVVIDFMATWCGPCKMIGPKL----DEIAAEMSDSIVV 254
K L +AG+ K++ + F A WC PC+ P L +E+ E D +++
Sbjct: 13 KGELVDAGEAVKGKVIAVYFSAHWCPPCRQFTPILKDFYEELGGEEGDLVII 64
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 31.1 bits (67), Expect = 0.91
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +3
Query: 150 KLVVIDFMATWCGPCKMIGPKLDEIAAEMS 239
+++++DF A WC C + PK ++ A +++
Sbjct: 40 EVMLVDFYAPWCSDCDNLRPKYEKAARDLA 69
>SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021)
Length = 293
Score = 31.1 bits (67), Expect = 0.91
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 147 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDS 245
+K+V I F A+WC PC+ P L + E S
Sbjct: 154 NKVVAIYFSASWCPPCQKFTPLLKDFYEEKIQS 186
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 31.1 bits (67), Expect = 0.91
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 156 VVIDFMATWCGPCKMIGPKLDEIAAEMSD 242
V++ F A WCG CK PK ++ A D
Sbjct: 167 VLVMFYAPWCGHCKNAKPKYEKAAETFKD 195
>SB_17078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 31.1 bits (67), Expect = 0.91
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -1
Query: 474 HVFFFLIPFSFHRRLRTTLVSIY 406
H+FFF +PFS H+ + TT++ Y
Sbjct: 192 HIFFFSLPFSHHQIIITTIIIKY 214
>SB_47047| Best HMM Match : DUF761 (HMM E-Value=3.2)
Length = 389
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -3
Query: 229 AAISSSLGPIILHGPHQVAMKSITTSLSPASASLVFRSSESL 104
+A SS + P++ H H V+ + ++ P S++ S E L
Sbjct: 338 SAQSSPINPVVYHDNHDVSTSGVKSATCPVCESVIHGSGEEL 379
>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 2726
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = -3
Query: 262 HLETTMESDISAAISSSLGPIILHG-PHQVAMKSITTSLSPASASLVFRSSES 107
H +T E S+A++SSL P HG P ++ + ++TS ++SL +S +S
Sbjct: 911 HSSSTTEEMSSSALTSSLSPSSPHGAPLSLSTEELSTSSLSITSSLPQQSMQS 963
>SB_10252| Best HMM Match : tRNA-synt_2b (HMM E-Value=3.2e-32)
Length = 734
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 562 FQRLQTLKINIFKFITDVKTFFLHLLKTYTCFF 464
F+RL+ K ++ + D + FF H L +CFF
Sbjct: 356 FERLEMKKEDLLEMFKDQELFFFHELSPGSCFF 388
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 150 KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 242
K V++ F A WCG CK P+L A D
Sbjct: 213 KHVLVMFYAPWCGHCKKAKPELMSAAKHHKD 243
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 PKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 242
P +H++D DD + + V++ F A WCG CK + P+ + A + +
Sbjct: 81 PSEVVHLRDDMFDDFVAK-----NPSVLVMFYAPWCGHCKAMKPEYVDAAQTLKE 130
>SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019)
Length = 415
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 150 KLVVIDFMATWCGPCKMIGPKLDE 221
K+V + F A WC PC+ PKL E
Sbjct: 30 KIVGLYFSAHWCPPCRGFTPKLVE 53
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +3
Query: 141 AGD---KLVVIDFMATWCGPCKMIGPKL 215
AGD K+V I F A WC PC+ P+L
Sbjct: 168 AGDLKGKIVGIYFSAHWCPPCRAFTPEL 195
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +3
Query: 66 LVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDS 245
L I LP +++ L +L+ + + +V D + GPCK + E+ D
Sbjct: 31 LTDINLPYITVDASGPKHLNMKLSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDV 90
Query: 246 IVVSRWTLM 272
++V T M
Sbjct: 91 LLVGGMTRM 99
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,272,187
Number of Sequences: 59808
Number of extensions: 357958
Number of successful extensions: 835
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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