Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00195
(705 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 55 4e-08
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 53 2e-07
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 52 3e-07
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 51 7e-07
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 50 2e-06
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 50 2e-06
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 49 3e-06
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 49 3e-06
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 49 3e-06
At1g11530.1 68414.m01324 thioredoxin family protein similar to t... 49 3e-06
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 48 5e-06
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 48 8e-06
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 47 1e-05
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 47 1e-05
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 46 2e-05
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 46 2e-05
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 45 4e-05
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 45 4e-05
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 45 4e-05
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 45 6e-05
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 43 2e-04
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 43 2e-04
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 43 2e-04
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 43 2e-04
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 42 4e-04
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 42 4e-04
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 42 5e-04
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 41 0.001
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 40 0.002
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 40 0.002
At4g04950.1 68417.m00719 thioredoxin family protein similar to P... 39 0.003
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 38 0.005
At4g32580.1 68417.m04638 thioredoxin family protein contains Pfa... 38 0.006
At5g61340.1 68418.m07697 expressed protein 38 0.009
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 38 0.009
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 37 0.015
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 37 0.015
At5g06690.1 68418.m00756 thioredoxin family protein low similiar... 36 0.020
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 36 0.026
At1g76080.1 68414.m08835 thioredoxin family protein low similari... 36 0.026
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 36 0.026
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 36 0.035
At5g60620.1 68418.m07608 phospholipid/glycerol acyltransferase f... 34 0.080
At5g04260.1 68418.m00417 thioredoxin family protein low similari... 34 0.080
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 34 0.080
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 34 0.11
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 34 0.11
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 34 0.11
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 33 0.14
At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containi... 33 0.18
At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containi... 33 0.24
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 33 0.24
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 31 0.98
At1g07700.3 68414.m00829 thioredoxin family protein low similari... 31 0.98
At1g07700.2 68414.m00827 thioredoxin family protein low similari... 31 0.98
At1g07700.1 68414.m00828 thioredoxin family protein low similari... 31 0.98
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 29 2.3
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 29 2.3
At5g17890.1 68418.m02098 LIM domain-containing protein / disease... 29 4.0
At4g31240.2 68417.m04435 expressed protein 28 6.9
At4g31240.1 68417.m04434 expressed protein 28 6.9
At1g78740.1 68414.m09177 hypothetical protein 28 6.9
At5g36010.1 68418.m04337 hypothetical protein contains Pfam prof... 27 9.2
At4g02330.1 68417.m00317 pectinesterase family protein contains ... 27 9.2
At2g45060.1 68415.m05609 expressed protein 27 9.2
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 27 9.2
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 27 9.2
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 27 9.2
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 27 9.2
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Frame = +3
Query: 96 IHIKDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 242
+ IK+ + K+RL D KL+VI+F A WCGPCK + PKL+E+AA+ +D
Sbjct: 40 VEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTD 90
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 257 KVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 376
K+DVD + E+N++++P VF+K G+++D G VD
Sbjct: 95 KIDVDVLMSVWMEFNLSTLPAIVFMKRGREVDMVVGVKVD 134
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +2
Query: 254 FKVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 370
FKVDVDE + +A E+ + +MPTFVF+K G+ +D+ GAN
Sbjct: 64 FKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGAN 102
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +3
Query: 99 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIV 251
H D ++ A+ +KL+VIDF A+WC PC+MI P +++A + S +
Sbjct: 12 HTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2
Query: 257 KVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 376
K+DVDE D+A E+N+ +MPTFV VK GK+++ GA D
Sbjct: 83 KLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKD 122
Score = 45.2 bits (102), Expect = 4e-05
Identities = 16/32 (50%), Positives = 25/32 (78%)
Frame = +3
Query: 147 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 242
+KL+V+DF A+WCGPC+MI P + +A + +D
Sbjct: 47 NKLLVVDFSASWCGPCRMIEPAIHAMADKFND 78
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 51.2 bits (117), Expect = 7e-07
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +3
Query: 108 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
D D + AGDK+VV+D WCGPCK+I PK E++ + D +
Sbjct: 84 DKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMV 130
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +3
Query: 84 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 233
P M I I ++ L +AGD+LV++DF TWCG C+ + PKL + A E
Sbjct: 93 PNM-IDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKE 141
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/38 (47%), Positives = 32/38 (84%)
Frame = +2
Query: 257 KVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 370
KVD+D+ D+A+ +NI+S+PTF F+++GK++D+ GA+
Sbjct: 328 KVDIDKANDVAASWNISSVPTFCFIRDGKEVDKVVGAD 365
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 90 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMS 239
+SIH + KT+ A+ +L+++ F ATWCGPC+ + P +A + S
Sbjct: 273 ISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHS 322
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/37 (48%), Positives = 29/37 (78%)
Frame = +3
Query: 138 EAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
+ +KL+VIDF A WCGPCK + P++ EIA++ S+++
Sbjct: 40 KGSNKLLVIDFTAVWCGPCKAMEPRVREIASKYSEAV 76
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 257 KVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 376
+VDVD D+A Y ++P FVFVK G+++D GA D
Sbjct: 79 RVDVDRLMDVAGTYRAITLPAFVFVKRGEEIDRVVGAKPD 118
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +2
Query: 254 FKVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 376
FK+DVDE + +A E+ + +MPTFVF+K G +D GA D
Sbjct: 62 FKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKD 102
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3
Query: 123 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
K + A KL+VIDF A+WC PC+ I P E+A + ++ +
Sbjct: 19 KVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +3
Query: 132 LAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVV 254
L + DK V++DF ATWCGPC+++ P L+E++ + D I V
Sbjct: 71 LLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAV 111
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 257 KVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 367
K+D ++ +A++Y I ++PTF+ K+GK D F GA
Sbjct: 113 KIDTEKYPSLANKYQIEALPTFILFKDGKLWDRFEGA 149
>At1g11530.1 68414.m01324 thioredoxin family protein similar to
thioredoxin H-type from Arabidopsis thaliana SP|P29448,
Nicotiana tabacum SP|Q07090; contains Pfam profile:
PF00085 Thioredoxin
Length = 118
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2
Query: 260 VDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 376
VDVDE +++AS+ + +MPTF+F+K+G +D+ GAN D
Sbjct: 61 VDVDEVKEVASQLEVKAMPTFLFLKDGNAMDKLVGANPD 99
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2
Query: 257 KVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 376
KVD DE + +AS++ I +MPTF+F+K GK LD+ GA D
Sbjct: 64 KVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKD 103
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +3
Query: 90 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEM 236
++ H ++ + + + A LVV+DF A+WCGPC+ I P ++A ++
Sbjct: 9 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKL 57
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 47.6 bits (108), Expect = 8e-06
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 108 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
D D + AG+KLVV+D WCGPCK+I PK ++ + D +
Sbjct: 74 DKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVV 120
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/55 (34%), Positives = 34/55 (61%)
Frame = +3
Query: 84 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E D +
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIV 156
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/55 (34%), Positives = 34/55 (61%)
Frame = +3
Query: 84 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E D +
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIV 156
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +3
Query: 96 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMS 239
I K+S D K A+ K+VV +F ATWCGPCK++ P E++ + S
Sbjct: 28 ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHS 75
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +2
Query: 260 VDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 370
VDVDE D +S ++I + PTF F+KNG+++ + GAN
Sbjct: 82 VDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGAN 118
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 46.0 bits (104), Expect = 2e-05
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = +3
Query: 147 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVV 254
DK V++D+ ATWCGPC+ + P L+E++ + D I V
Sbjct: 81 DKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQV 116
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 257 KVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 367
K+D ++ IA++Y I ++PTF+ K+G+ D F GA
Sbjct: 118 KIDTEKYPSIANKYKIEALPTFILFKDGEPCDRFEGA 154
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +3
Query: 102 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 227
+ DL L AGDKLVV+DF + CG CK + PK+ +IA
Sbjct: 98 VTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKIA 139
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 45.2 bits (102), Expect = 4e-05
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +3
Query: 156 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVV 254
V+++F+ATWCGPCK+I P ++ ++ E D + +
Sbjct: 90 VLVEFVATWCGPCKLIYPAMEALSQEYGDKLTI 122
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 102 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
I + +L L AGDKLVV+DF + CG CK + PK+ + AEM+ +
Sbjct: 102 ISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQF-AEMNPDV 149
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 123 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
K + A KL+VIDF ATWC PC+ I P ++A + D +
Sbjct: 19 KLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +2
Query: 254 FKVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 367
FKVDVDE +A E+ + +MPTF+F+K G+ + GA
Sbjct: 62 FKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGA 99
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 96 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 227
+ I+ ++ L L AGD+LVV+DF + CG CK + PK+ ++A
Sbjct: 88 LEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQLA 131
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3
Query: 156 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
VV+DF A WCGPCKMI P ++++A + I
Sbjct: 101 VVVDFWAPWCGPCKMIDPLVNDLAQHYTGKI 131
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 254 FKVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 367
+K++ DE + +Y + S+PT + G+K D GA
Sbjct: 134 YKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGA 171
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 111 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 227
+D L D+ V +DF A WCGPCKMI P ++E+A
Sbjct: 80 NDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELA 118
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 254 FKVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 367
+K++ DE +Y + S+PT + NG+K D GA
Sbjct: 128 YKLNTDESPATPGQYGVRSIPTIMIFVNGEKKDTIIGA 165
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/47 (38%), Positives = 34/47 (72%)
Frame = +3
Query: 99 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMS 239
++ DS+ +T++ E+ D V+++F A WCGPC+MI P +D++A + +
Sbjct: 90 NLSDSE-WQTKVLES-DVPVLVEFWAPWCGPCRMIHPIVDQLAKDFA 134
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 254 FKVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 367
+K++ DE + A+ Y I S+PT + K G+K D GA
Sbjct: 140 YKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGA 177
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 111 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE-MSDSIVV 254
SD L + +G K V+++F A WCG C+ + P LDE+A SDS VV
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDSSVV 428
Score = 37.5 bits (83), Expect = 0.009
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +3
Query: 156 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
+V++F A WCG CK + P+ ++ A+ +S ++
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNV 80
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 111 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE-MSDSIVV 254
SD L + +G K V+++F A WCG C+ + P LDE+A SDS VV
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDSSVV 428
Score = 37.5 bits (83), Expect = 0.009
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +3
Query: 156 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
+V++F A WCG CK + P+ ++ A+ +S ++
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNV 80
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 41.5 bits (93), Expect = 5e-04
Identities = 15/36 (41%), Positives = 28/36 (77%)
Frame = +2
Query: 260 VDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 367
VDV+E + ++E+N+ + PT VF+K+G+++D+ GA
Sbjct: 45 VDVEELAEFSNEWNVEATPTVVFLKDGRQMDKLVGA 80
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 174 ATWCGPCKMIGPKLDEIAAEMSDSIVVS 257
A WC PCK I P ++A+ I V+
Sbjct: 17 APWCVPCKKIEPVFRDLASRYPSMIFVT 44
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +3
Query: 144 GDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMSDSIVV 254
GD+ V ++DF ATWCGPC ++ +L+ +A E + ++
Sbjct: 91 GDRKVPLIVDFYATWCGPCILMAQELEMLAVEYESNAII 129
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Frame = +3
Query: 69 VSIYLPKMSIHIKDSDDLKTRLAEAGD-------KLVVIDFMATWCGPCKMIGPKLDEIA 227
V+++ I ++++ +K +AE+ D K V+I+F A WCG C+ + P LDE+A
Sbjct: 357 VAVHKKSQPIPAENNEPVKVVVAESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVA 416
Query: 228 AEMSD--SIVVSR 260
+ S+++++
Sbjct: 417 LSFQNDPSVIIAK 429
Score = 36.3 bits (80), Expect = 0.020
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +3
Query: 156 VVIDFMATWCGPCKMIGPKLDEIAAEMS 239
+V++F A WCG C+ + P+ ++ A+E+S
Sbjct: 49 IVVEFYAPWCGHCQKLAPEYEKAASELS 76
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +2
Query: 257 KVDVDE--CEDIASEYNINSMPTFVFVKN-GKKLDEFSG 364
K+D E ++ A+EY I PT ++N GK + +++G
Sbjct: 86 KIDASEEANKEFANEYKIQGFPTLKILRNGGKSVQDYNG 124
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 39.5 bits (88), Expect = 0.002
Identities = 13/37 (35%), Positives = 28/37 (75%)
Frame = +2
Query: 260 VDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 370
+DV+E + + E+N+++ PT VF+K+G+++D+ G +
Sbjct: 99 IDVEELAEFSHEWNVDATPTVVFLKDGRQMDKLVGGD 135
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +3
Query: 78 YLPKMSIH-IKDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
Y K +H + + + ++ EA K++V++F A+WC P K I P E+A+ + I
Sbjct: 36 YFIKGKVHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKTILPIYQELASTYTSMI 95
Query: 249 VVS 257
V+
Sbjct: 96 FVT 98
>At4g04950.1 68417.m00719 thioredoxin family protein similar to
PKCq-interacting protein PICOT from [Mus musculus]
GI:6840949, [Rattus norvegicus] GI:6840951; contains
Pfam profile PF00085: Thioredoxin
Length = 488
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +2
Query: 254 FKVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 370
F+V+ +E +I+ Y++ ++P FVF K+GK +D GA+
Sbjct: 56 FRVEAEEHPEISEAYSVAAVPYFVFFKDGKTVDTLEGAD 94
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 38.3 bits (85), Expect = 0.005
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 156 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
V+++F +WCGPC+M+ +DEIA + + +
Sbjct: 87 VLVEFYTSWCGPCRMVHRIIDEIAGDYAGKL 117
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 254 FKVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSG 364
+ ++ D +A EY I ++P + KNG+K + G
Sbjct: 120 YLLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMG 156
>At4g32580.1 68417.m04638 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 160
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +2
Query: 254 FKVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 370
F+V+ +E +I+ Y++ +P FVF K+GK +D GA+
Sbjct: 56 FRVEAEEHPEISEAYSVALVPYFVFFKDGKTVDTLEGAD 94
>At5g61340.1 68418.m07697 expressed protein
Length = 326
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = -3
Query: 502 FFLHLLKTYTCFFFFNSI*FPSAAAYNFSLYLLVFKDSCFEFVDVSAREFVQFLAI 335
F+L LLKTY C FFF SA A F+L+ L + + E S+R F FL++
Sbjct: 122 FYLRLLKTYVCNFFF----LLSANASAFALFFLAY--NTLEAFGFSSRNFYTFLSL 171
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +3
Query: 156 VVIDFMATWCGPCKMIGPKLD---EIAAEMSDSIVVSR 260
+ +DF A WCG CK + P+LD I A++ IV+++
Sbjct: 52 IFVDFYAPWCGHCKRLNPELDAAAPILAKLKQPIVIAK 89
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +3
Query: 39 FAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLD 218
F F + L LVS + + DS + + DK +++F A WCG CK + P+ +
Sbjct: 8 FGFALLALLLVSAVADDVVVLTDDSFEKEV----GKDKGALVEFYAPWCGHCKKLAPEYE 63
Query: 219 EIAA--EMSDSIVVSR 260
++ A + + S+++++
Sbjct: 64 KLGASFKKAKSVLIAK 79
Score = 34.3 bits (75), Expect = 0.080
Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 147 DKLVVIDFMATWCGPCKMIGPKLDEIAA--EMSDSIVVS 257
+K V+++F A WCG CK + P +++A + + +V++
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIA 197
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +3
Query: 39 FAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLD 218
F F + L LVS + + DS + + DK +++F A WCG CK + P+ +
Sbjct: 8 FGFALLALLLVSAVADDVVVLTDDSFEKEV----GKDKGALVEFYAPWCGHCKKLAPEYE 63
Query: 219 EIAA--EMSDSIVVSR 260
++ A + + S+++++
Sbjct: 64 KLGASFKKAKSVLIAK 79
Score = 34.3 bits (75), Expect = 0.080
Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 147 DKLVVIDFMATWCGPCKMIGPKLDEIAA--EMSDSIVVS 257
+K V+++F A WCG CK + P +++A + + +V++
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIA 197
>At5g06690.1 68418.m00756 thioredoxin family protein low similiarity
to SP|P34723 Thioredoxin {Penicillium chrysogenum};
contains Pfam profile: PF00085 Thioredoxin
Length = 210
Score = 36.3 bits (80), Expect = 0.020
Identities = 12/29 (41%), Positives = 23/29 (79%)
Frame = +3
Query: 156 VVIDFMATWCGPCKMIGPKLDEIAAEMSD 242
++I++MA+WC C + PKL+++AAE ++
Sbjct: 121 IIIEWMASWCRKCIYLKPKLEKLAAEYNN 149
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 35.9 bits (79), Expect = 0.026
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 102 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMSD 242
+K ++ +++A D + V F A WCGPC+ I P + E++ + D
Sbjct: 89 VKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVIVELSKQYPD 137
>At1g76080.1 68414.m08835 thioredoxin family protein low similarity
to thioredoxin (TRX) [Fasciola hepatica] GI:6687568;
contains Pfam profile PF00085: Thioredoxin
Length = 302
Score = 35.9 bits (79), Expect = 0.026
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 144 GDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVSR 260
G KL+V+D CGPC + P + +++ MS+++V +R
Sbjct: 206 GGKLIVLDVGLKHCGPCVKVYPTVLKLSRSMSETVVFAR 244
Score = 29.1 bits (62), Expect = 3.0
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +2
Query: 269 DECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 367
D C + + N+ +PTF+F+++G+ + G+
Sbjct: 251 DSCMEFLKDMNVIEVPTFLFIRDGEIRGRYVGS 283
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +3
Query: 102 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMSD 242
+K + + L++A D + V F A WCGPC++I P + E++ + D
Sbjct: 54 LKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELSNKYPD 102
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 35.5 bits (78), Expect = 0.035
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 150 KLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
K + + F A WCGPC+ P+L E+ E+S +
Sbjct: 44 KKIGLYFSAAWCGPCQRFTPQLVEVYNELSSKV 76
Score = 35.1 bits (77), Expect = 0.046
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 99 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 242
++ D K +++ K +++ F A WC PC+ PKL E+ ++ +
Sbjct: 347 YVLGKDGAKVLVSDLVGKTILMYFSAHWCPPCRAFTPKLVEVYKQIKE 394
>At5g60620.1 68418.m07608 phospholipid/glycerol acyltransferase
family protein contains Pfam PF01553: Acyltransferase
Length = 376
Score = 34.3 bits (75), Expect = 0.080
Identities = 18/63 (28%), Positives = 35/63 (55%)
Frame = +3
Query: 24 LECFLFAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMI 203
L CF AF +I +S+++P ++ +K D L+ ++ +++ F+A+W G K
Sbjct: 99 LRCFTLAFGWIIF--LSLFIPVNAL-LKGQDRLRKKIERVLVEMICSFFVASWTGVVKYH 155
Query: 204 GPK 212
GP+
Sbjct: 156 GPR 158
>At5g04260.1 68418.m00417 thioredoxin family protein low similarity
to SP|P29429 Thioredoxin. [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile: PF00085
Thioredoxin
Length = 192
Score = 34.3 bits (75), Expect = 0.080
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 156 VVIDFMATWCGPCKMIGPKLDEIAAE 233
VVI +MA WC C + PKL+++AAE
Sbjct: 101 VVIVWMAAWCRKCIYLKPKLEKLAAE 126
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 34.3 bits (75), Expect = 0.080
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 257 KVDVDECEDIASEYNINSMPTFVFVKNGKKLDE 355
KVD+D+C I + N+ +PT KNG ++ E
Sbjct: 649 KVDIDKCPSIGNAENVRVVPTVKIYKNGSRVKE 681
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 33.9 bits (74), Expect = 0.11
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 147 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVV 254
++ V+++F A WCG C+ + P+ A E+ + VV
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVV 155
Score = 30.7 bits (66), Expect = 0.98
Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 150 KLVVIDFMATWCGPCKMIGPKLDEIAAEMS--DSIVVSR 260
K V+++ A WCG C+ + P +++A + DS+V+++
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITK 498
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 257 KVDVDECEDIASEYNINSMPTFVFVKNGK 343
K+D E ++A EY + PT +F +G+
Sbjct: 158 KIDATEENELAQEYRVQGFPTLLFFVDGE 186
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 33.9 bits (74), Expect = 0.11
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 147 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVV 254
++ V+++F A WCG C+ + P+ A E+ + VV
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVV 155
Score = 30.7 bits (66), Expect = 0.98
Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 150 KLVVIDFMATWCGPCKMIGPKLDEIAAEMS--DSIVVSR 260
K V+++ A WCG C+ + P +++A + DS+V+++
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITK 498
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 257 KVDVDECEDIASEYNINSMPTFVFVKNGK 343
K+D E ++A EY + PT +F +G+
Sbjct: 158 KIDATEENELAQEYRVQGFPTLLFFVDGE 186
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 84 PKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
P S+ + S D+L T E L +++F A WCG CK + P+ + A + +
Sbjct: 162 PSASVELNSSNFDELVTESKE----LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKV 214
Score = 32.3 bits (70), Expect = 0.32
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +3
Query: 153 LVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIVVS 257
+V+++F A WCG C+ + P +++A+ + V+
Sbjct: 48 VVLVEFFAPWCGHCQSLTPTWEKVASTLKGIATVA 82
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 263 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGA 367
D+DEC + +I PTF F ++G+K+DE GA
Sbjct: 81 DIDECPETTR--HIRYTPTFQFYRDGEKVDEMFGA 113
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 114 DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMS 239
DD+K+ + A VI++ A+WCG C I P +++ S
Sbjct: 37 DDIKSSKSPA-----VINYGASWCGVCSQILPAFRKLSNSFS 73
>At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 682
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 254 FKVDVDECEDIASEYNINSMPTFVFVKNGKKLDE 355
FKVDV+E +A +I +PTF K G+K+ E
Sbjct: 631 FKVDVEESLALAKAESIKKIPTFKIYKKGEKVKE 664
>At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 691
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 254 FKVDVDECEDIASEYNINSMPTFVFVKNGKKLDE 355
F VDV+E +A +I +PTF KNG K+ E
Sbjct: 640 FMVDVEESMALAKAESIRKVPTFKMYKNGDKVKE 673
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 32.7 bits (71), Expect = 0.24
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 153 LVVIDFMATWCGPCKMIGPKLDEIA 227
+V+++F A WCG CK + P +++A
Sbjct: 50 VVLVEFFAPWCGHCKALTPTWEKVA 74
Score = 32.3 bits (70), Expect = 0.32
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 147 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
++L +++F A WCG CK + P+ A + +
Sbjct: 180 NELWIVEFFAPWCGHCKKLAPEWKRAAKNLQGKV 213
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 156 VVIDFMATWCGPCKMIGPKLDEIAAE 233
V++ F A WCGPC+ + P L+++ +E
Sbjct: 230 VMVMFTARWCGPCRDMIPILNKMDSE 255
>At1g07700.3 68414.m00829 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 217
Score = 30.7 bits (66), Expect = 0.98
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 105 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 242
K D+L + L ++ + LVV+DF T CG CK I ++ + D
Sbjct: 104 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGD 151
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 263 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFS 361
+ DE ++A I ++P F F KNG L+ F+
Sbjct: 166 EYDEQSEVAERLRIKAVPLFHFYKNGVLLESFA 198
>At1g07700.2 68414.m00827 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 171
Score = 30.7 bits (66), Expect = 0.98
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 105 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 242
K D+L + L ++ + LVV+DF T CG CK I ++ + D
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGD 138
>At1g07700.1 68414.m00828 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 204
Score = 30.7 bits (66), Expect = 0.98
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 105 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 242
K D+L + L ++ + LVV+DF T CG CK I ++ + D
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGD 138
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 263 DVDECEDIASEYNINSMPTFVFVKNGKKLDEFS 361
+ DE ++A I ++P F F KNG L+ F+
Sbjct: 153 EYDEQSEVAERLRIKAVPLFHFYKNGVLLESFA 185
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 29.5 bits (63), Expect = 2.3
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 147 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM 236
+ +++F A WCG C+ + P+ A E+
Sbjct: 116 NSFAMVEFYAPWCGACQALTPEYAAAATEL 145
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 150 KLVVIDFMATWCGPCKMIGPKLDEIAAEMS--DSIVVSR 260
K V+++ A WCG C+ P +++ + DS+VV++
Sbjct: 456 KDVLLEIYAPWCGHCQSFEPIYNKLGKYLKGIDSLVVAK 494
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 257 KVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 376
K+D D IASE I PT + NG L G++ +
Sbjct: 134 KIDGDRYSKIASELEIKGFPTLLLFVNGTSLTYNGGSSAE 173
>At5g17890.1 68418.m02098 LIM domain-containing protein / disease
resistance protein-related low similarity to disease
resistance protein RPP4 [Arabidopsis thaliana]
GI:20270890; contains Pfam profiles PF00412: LIM domain,
PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1613
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 570 FLHSRGCKH*KLISSNSLQTLKHFFF 493
FL++ GCKH K I+ + Q +HF F
Sbjct: 816 FLNAHGCKHLKSINLDFEQLPRHFIF 841
>At4g31240.2 68417.m04435 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 150 KLVVIDFMATWCGPCKMIGPKL 215
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At4g31240.1 68417.m04434 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 150 KLVVIDFMATWCGPCKMIGPKL 215
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At1g78740.1 68414.m09177 hypothetical protein
Length = 306
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 414 SIYLCLRIVVLSLSTLA-PENSSSFLPFLTXTNVG 313
+IY+C +V L LST+ P S LPFL +G
Sbjct: 94 TIYICESLVSLKLSTVTLPSVKSVSLPFLRVLKLG 128
>At5g36010.1 68418.m04337 hypothetical protein contains Pfam profile
PF03778: Protein of unknown function (DUF321)
Length = 221
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 456 LKKKKHVYVFNK*RKNVLTSVMNLKILIFSVCSLWNAKNI 575
L +K VYVF ++ V NL++ FS+ SL +N+
Sbjct: 179 LTRKSRVYVFGGKITDLCFLVENLRVYFFSISSLVYLRNL 218
>At4g02330.1 68417.m00317 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 573
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 432 LRTTLVSIYLCLRIVVLSLSTLAPENSSS 346
L+ LV+++L L+ + ++ TL P NSSS
Sbjct: 4 LKLFLVTLFLSLQTLFIASQTLLPSNSSS 32
>At2g45060.1 68415.m05609 expressed protein
Length = 272
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 266 VDECEDIASEYNINSMPTFVFVKNG 340
+D DIASEYN+ F +K+G
Sbjct: 90 IDSLRDIASEYNVYEQMVFGKIKDG 114
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 27.5 bits (58), Expect = 9.2
Identities = 8/40 (20%), Positives = 23/40 (57%)
Frame = +3
Query: 129 RLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 248
+L +++++ + + CGPC+ + P L+++ E + +
Sbjct: 436 KLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHDV 475
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +2
Query: 257 KVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSG 364
+VD + ++ I+S PTF+ NG+++ ++ G
Sbjct: 82 EVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKG 117
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +2
Query: 257 KVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSG 364
+VD + ++ I+S PTF+ NG+++ ++ G
Sbjct: 82 EVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKG 117
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +2
Query: 257 KVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSG 364
+VD + ++ I+S PTF+ NG+++ ++ G
Sbjct: 82 EVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKG 117
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,804,111
Number of Sequences: 28952
Number of extensions: 259925
Number of successful extensions: 710
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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