Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00194
(413 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 131 2e-31
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 130 3e-31
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 128 2e-30
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 31 0.48
02_02_0317 + 8893593-8894207 31 0.48
08_02_0451 + 17297293-17297793,17297866-17298130,17298215-172984... 30 0.64
07_03_1509 - 27246721-27247350 29 1.5
09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 28 2.6
09_06_0319 - 22293869-22293906,22294539-22295808 27 4.5
06_02_0103 - 11829343-11829699,11831560-11831826,11832239-118325... 27 4.5
06_02_0084 - 11547820-11548773 27 4.5
08_01_0651 + 5622786-5624165,5624720-5624881,5624984-5625173,562... 27 5.9
05_01_0378 + 2970528-2971008,2971961-2972036,2972108-2972253,297... 27 5.9
04_04_0932 - 29488626-29488877,29488965-29489201,29489578-294899... 27 5.9
01_06_0102 - 26447286-26448107,26448248-26448385,26448990-264493... 27 5.9
09_04_0623 - 19038777-19040561 27 7.8
08_02_0270 + 15108178-15108587,15108678-15108774,15109445-151094... 27 7.8
03_01_0577 + 4261249-4262055,4262149-4262203,4262293-4262468,426... 27 7.8
02_01_0759 - 5628913-5630870,5631023-5631047 27 7.8
02_01_0254 - 1669461-1669590,1669833-1672318 27 7.8
01_06_1640 + 38836977-38836988,38837694-38838047,38838164-388382... 27 7.8
01_06_0212 + 27575406-27575604,27575723-27576241,27576371-27576387 27 7.8
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 131 bits (316), Expect = 2e-31
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +2
Query: 2 IRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVITALRRAK 181
+RINKMLSCAGADRLQTGMRGAFGKP GT ARVRIGQ ++SVR D A ALRRAK
Sbjct: 404 LRINKMLSCAGADRLQTGMRGAFGKPTGTCARVRIGQVLLSVRCRDANAAHAQEALRRAK 463
Query: 182 FKFPGRQKIYVSKKWGFTKYERDE 253
FKFPGRQ++ S KWGFT+++RDE
Sbjct: 464 FKFPGRQRVIFSAKWGFTRFKRDE 487
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 130 bits (315), Expect = 3e-31
Identities = 62/84 (73%), Positives = 67/84 (79%)
Frame = +2
Query: 2 IRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVITALRRAK 181
+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++SVR ALRRAK
Sbjct: 93 LRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAK 152
Query: 182 FKFPGRQKIYVSKKWGFTKYERDE 253
FKFPGRQKI S+KWGFTK+ RDE
Sbjct: 153 FKFPGRQKIIESRKWGFTKFSRDE 176
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 128 bits (309), Expect = 2e-30
Identities = 61/84 (72%), Positives = 68/84 (80%)
Frame = +2
Query: 2 IRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVITALRRAK 181
+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++SVR + ALRRAK
Sbjct: 97 LRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAK 156
Query: 182 FKFPGRQKIYVSKKWGFTKYERDE 253
FKFPGRQKI S+KWGFTK+ R+E
Sbjct: 157 FKFPGRQKIIHSRKWGFTKFTREE 180
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 190 PRTSKDLRIKEVGFHKV*T**VEKLREEGRLANDGCIVQYRPEHGPL 330
P K + ++ GF K KL+ EGR+ +DG Q HG L
Sbjct: 160 PGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQLLGSHGRL 206
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 30.7 bits (66), Expect = 0.48
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -3
Query: 117 MGCPMRTRATVP*GLPNAPRIPVWSLSAPAH 25
+ CP+ + + VP LP++P P++S ++P +
Sbjct: 1625 LSCPLTSPSYVPTSLPHSPTSPIYSATSPIY 1655
>02_02_0317 + 8893593-8894207
Length = 204
Score = 30.7 bits (66), Expect = 0.48
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -2
Query: 361 GSQPEPSSKRREVHVP---GGTARCSRHWRGGP 272
G +P P++ R +HVP GG R RHWR P
Sbjct: 3 GRRPRPAAGTR-IHVPQPCGGEIRWERHWRPDP 34
>08_02_0451 +
17297293-17297793,17297866-17298130,17298215-17298410,
17298437-17298864,17298923-17299200,17299298-17299588
Length = 652
Score = 30.3 bits (65), Expect = 0.64
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +2
Query: 242 ERDELRSCVKRAASPMTAASCSTARNMDLSTLGGRFRLRS 361
E DE S +KR A + AA CST R M G + RLR+
Sbjct: 542 EFDEGYSAIKRLAVRILAAHCSTERTMRACLDGFKNRLRA 581
>07_03_1509 - 27246721-27247350
Length = 209
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +3
Query: 105 LDNPSCPCALVTGGRHRSSRL---CAVP--SSSSPDVKRSTYQRSGVS 233
L P PC RH RL +P +SSSP+++R+T R+G S
Sbjct: 132 LQPPLSPCLSAGRRRHHLPRLHDAALIPGITSSSPELRRNTVARAGFS 179
>09_06_0320 - 22297579-22297760,22298433-22299358,22299422-22299747,
22300591-22300660,22301632-22301726,22301917-22302048,
22302154-22302222,22302953-22303051,22303169-22303253,
22303353-22303453,22303660-22303728,22303861-22303901,
22304085-22304303,22304444-22304470,22304562-22304660,
22304898-22305106,22305382-22305485,22305753-22305894,
22305991-22306289,22306508-22306903
Length = 1229
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 71 GKPQGTVARVRIGQPIMSVRSSD 139
G PQ T+ R+ +G P +S++S+D
Sbjct: 1089 GTPQQTLERLHVGHPTLSLQSND 1111
>09_06_0319 - 22293869-22293906,22294539-22295808
Length = 435
Score = 27.5 bits (58), Expect = 4.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 71 GKPQGTVARVRIGQPIMSVRSSD 139
G PQ T+ R+ +G P +S+ S D
Sbjct: 343 GTPQPTLERLHVGHPTLSLHSDD 365
>06_02_0103 -
11829343-11829699,11831560-11831826,11832239-11832559,
11833783-11833844,11835413-11835446,11835539-11835619
Length = 373
Score = 27.5 bits (58), Expect = 4.5
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2
Query: 230 FTKYERDELRSCVKRAASPMTAASCSTARNMDLSTLG 340
F K +D +++ ++ A + + +SC +NM ++ LG
Sbjct: 58 FIKTAQDRMKTLIEEAVTGLCTSSCPHPKNMVIADLG 94
>06_02_0084 - 11547820-11548773
Length = 317
Score = 27.5 bits (58), Expect = 4.5
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +2
Query: 20 LSCAGADRLQTGMRGAFGK--PQGTVARVRIGQPIMSVRSSDRWK 148
L G DR Q GMRGA P RVR +P R +W+
Sbjct: 133 LGAGGGDRGQLGMRGAADGWWPDWRERRVRWRRPAWRERRGRQWR 177
>08_01_0651 +
5622786-5624165,5624720-5624881,5624984-5625173,
5625253-5625284
Length = 587
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 250 ITFILCETPLL*YVDLLTSGELELGTAQSRDDLCLPPVTRAHGHDGLSN 104
+ F+ C TP+ L SG L G+ D L + + H DG S+
Sbjct: 307 LVFLQCITPMKWVPVLKDSGSLVTGSIMIDDSLLIGDSKKGHEVDGFSS 355
>05_01_0378 +
2970528-2971008,2971961-2972036,2972108-2972253,
2972300-2972817
Length = 406
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 16 NVIVRWS**APDWDAWCVWQASGYCSTCSHWT 111
NV+ RW P AWC + S + CS W+
Sbjct: 342 NVLGRWGH-GPVPGAWCSGRKSWFSDPCSQWS 372
>04_04_0932 -
29488626-29488877,29488965-29489201,29489578-29489942,
29490825-29491137
Length = 388
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = -3
Query: 369 YIEDLSLNLPPSVERSMFRAVLHDAAVIGEAALFTQLLNSSRSYFV 232
Y++ L PS+ R L + E +++T++L+S S+F+
Sbjct: 235 YLKKQEFALDPSMTRFHLSEPLRRPVLTSEPSIYTRVLHSQDSFFI 280
>01_06_0102 -
26447286-26448107,26448248-26448385,26448990-26449359,
26449505-26449606,26449696-26449788,26449934-26450181,
26451088-26451274,26451825-26452043,26452464-26452660,
26453545-26453875,26454099-26454457,26455141-26455240,
26455349-26455464,26455547-26455663,26455782-26455880,
26456057-26456131,26456205-26456286,26457724-26457763,
26458685-26458769,26458924-26459055
Length = 1303
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 272 RAASPMTAASCSTARNMDLSTLGG 343
R SP+TA + ST ++M LS GG
Sbjct: 530 RRISPVTATAISTVQSMPLSGFGG 553
>09_04_0623 - 19038777-19040561
Length = 594
Score = 26.6 bits (56), Expect = 7.8
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 14 KMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIT 163
++ +C L +G G KP G A V +G ++S S D WK +VIT
Sbjct: 388 RLSNCIAVCGLSSG--GDVAKPPGAAA-VALGL-LISELSQDPWKGRVIT 433
>08_02_0270 +
15108178-15108587,15108678-15108774,15109445-15109492,
15109583-15109806,15111367-15111463,15111556-15111651,
15112297-15112544,15112632-15112715,15112787-15113236,
15114880-15115024,15115116-15115217,15115677-15115769,
15117308-15117349,15119085-15119113,15119210-15119251,
15119922-15119997,15120764-15120835,15121208-15121326,
15121428-15121491,15121576-15123009
Length = 1323
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -2
Query: 400 FLRVECIDQIIH*GSQPEPSSKRREVHVPGGTARCSRHW 284
F C+ Q++H S+ E S +++ + G + C HW
Sbjct: 336 FYHPRCVAQLLHPNSRNEASEMEKKI-MAGFSFTCPVHW 373
>03_01_0577 +
4261249-4262055,4262149-4262203,4262293-4262468,
4262554-4262718,4262811-4263178,4263225-4263861,
4263952-4265844,4266325-4266672
Length = 1482
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -2
Query: 331 REVHVPGGTARCSRHWRGGP 272
R H P TA C R WR P
Sbjct: 500 RHAHQPPRTASCCRQWRRSP 519
>02_01_0759 - 5628913-5630870,5631023-5631047
Length = 660
Score = 26.6 bits (56), Expect = 7.8
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 138 SLERTDMMGCPMRT---RATVP*GLPNAPRIPVWSLSAPAHDNI 16
SLER D+ CP+ T A V G PN + V S S +D +
Sbjct: 233 SLERLDITRCPLITDKGLAAVAHGCPNLLSLTVESCSGVGNDGL 276
>02_01_0254 - 1669461-1669590,1669833-1672318
Length = 871
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 384 VLIRLYIEDLSLNLPPSVERSMFRAVLHDAAVIGEAALFTQLL 256
V +RL++ S PPS + F A + AA +AAL LL
Sbjct: 24 VALRLFLHLTSAASPPSPHSTSFLARILAAAAAHDAALLPSLL 66
>01_06_1640 +
38836977-38836988,38837694-38838047,38838164-38838294,
38838554-38838860,38839036-38839349,38839507-38839645
Length = 418
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 328 EVHVPGGTARCSRHWRGGPLHAASQLITFILCETPL 221
++ VPGG A C R W+ LH + C PL
Sbjct: 337 KMRVPGGCANCKRIWQLLELH-SRMCSALETCHVPL 371
>01_06_0212 + 27575406-27575604,27575723-27576241,27576371-27576387
Length = 244
Score = 26.6 bits (56), Expect = 7.8
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -2
Query: 202 LTSGELELGTAQSRDDLCLPPVTRAHGHDGLSNANTCYSTLRLAKRTTHP 53
L+SGEL +G + D+ LPPV G G S+A S + +R P
Sbjct: 134 LSSGELLIGASSPYDEPPLPPVHSRRG-AGRSSAVPRLSAPDIGRRYYEP 182
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,897,916
Number of Sequences: 37544
Number of extensions: 287090
Number of successful extensions: 855
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 742607976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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