Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00194
         (413 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   169   1e-42
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   169   1e-42
AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   169   1e-42
AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   169   1e-42
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   164   4e-41
L04929-1|AAA28850.1|  135|Drosophila melanogaster RNA binding pr...    27   9.8  
AE014297-1198|AAN13486.1|  135|Drosophila melanogaster CG17136-P...    27   9.8  
AE014297-1197|AAF54555.1|  135|Drosophila melanogaster CG17136-P...    27   9.8  

>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  169 bits (412), Expect = 1e-42
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +2

Query: 2   IRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVITALRRAK 181
           IRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVI ALRRAK
Sbjct: 97  IRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAK 156

Query: 182 FKFPGRQKIYVSKKWGFTKYERD 250
           FKFPGRQKIYVSKKWGFTKYER+
Sbjct: 157 FKFPGRQKIYVSKKWGFTKYERE 179



 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 24/48 (50%), Positives = 32/48 (66%)
 Frame = +1

Query: 217 KEVGFHKV*T**VEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAEI 360
           K+ GF K      E+LR++ RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 169 KKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 216


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  169 bits (412), Expect = 1e-42
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +2

Query: 2   IRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVITALRRAK 181
           IRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVI ALRRAK
Sbjct: 97  IRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAK 156

Query: 182 FKFPGRQKIYVSKKWGFTKYERD 250
           FKFPGRQKIYVSKKWGFTKYER+
Sbjct: 157 FKFPGRQKIYVSKKWGFTKYERE 179



 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 24/48 (50%), Positives = 32/48 (66%)
 Frame = +1

Query: 217 KEVGFHKV*T**VEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAEI 360
           K+ GF K      E+LR++ RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 169 KKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 216


>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  169 bits (412), Expect = 1e-42
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +2

Query: 2   IRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVITALRRAK 181
           IRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVI ALRRAK
Sbjct: 110 IRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAK 169

Query: 182 FKFPGRQKIYVSKKWGFTKYERD 250
           FKFPGRQKIYVSKKWGFTKYER+
Sbjct: 170 FKFPGRQKIYVSKKWGFTKYERE 192



 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 24/48 (50%), Positives = 32/48 (66%)
 Frame = +1

Query: 217 KEVGFHKV*T**VEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAEI 360
           K+ GF K      E+LR++ RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 182 KKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 229


>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  169 bits (412), Expect = 1e-42
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +2

Query: 2   IRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVITALRRAK 181
           IRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVI ALRRAK
Sbjct: 116 IRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAK 175

Query: 182 FKFPGRQKIYVSKKWGFTKYERD 250
           FKFPGRQKIYVSKKWGFTKYER+
Sbjct: 176 FKFPGRQKIYVSKKWGFTKYERE 198



 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 24/48 (50%), Positives = 32/48 (66%)
 Frame = +1

Query: 217 KEVGFHKV*T**VEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAEI 360
           K+ GF K      E+LR++ RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 188 KKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 235


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  164 bits (399), Expect = 4e-41
 Identities = 77/80 (96%), Positives = 79/80 (98%)
 Frame = +2

Query: 11  NKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVITALRRAKFKF 190
           NKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVI ALRRAKFKF
Sbjct: 79  NKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKF 138

Query: 191 PGRQKIYVSKKWGFTKYERD 250
           PGRQKIYVSKKWGFTKYER+
Sbjct: 139 PGRQKIYVSKKWGFTKYERE 158



 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 24/48 (50%), Positives = 32/48 (66%)
 Frame = +1

Query: 217 KEVGFHKV*T**VEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAEI 360
           K+ GF K      E+LR++ RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 148 KKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 195


>L04929-1|AAA28850.1|  135|Drosophila melanogaster RNA binding
           protein protein.
          Length = 135

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -1

Query: 317 SGRYCTMQPSLARRPSSRSFS 255
           SGRY +  P  +R P SRSFS
Sbjct: 102 SGRYRSRSPRRSRSPRSRSFS 122


>AE014297-1198|AAN13486.1|  135|Drosophila melanogaster CG17136-PC,
           isoform C protein.
          Length = 135

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -1

Query: 317 SGRYCTMQPSLARRPSSRSFS 255
           SGRY +  P  +R P SRSFS
Sbjct: 102 SGRYRSRSPRRSRSPRSRSFS 122


>AE014297-1197|AAF54555.1|  135|Drosophila melanogaster CG17136-PA,
           isoform A protein.
          Length = 135

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -1

Query: 317 SGRYCTMQPSLARRPSSRSFS 255
           SGRY +  P  +R P SRSFS
Sbjct: 102 SGRYRSRSPRRSRSPRSRSFS 122


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,837,579
Number of Sequences: 53049
Number of extensions: 453647
Number of successful extensions: 1206
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)