Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00192
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.8  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   7.7  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +1

Query: 517  ADQNSIPTNADSTRTPV-PFYFCCTECI 597
            A+ N+IPTNA +T   +  F + C + +
Sbjct: 1020 ANTNNIPTNAGTTPGAILAFSWACNDAV 1047


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -1

Query: 671 IIANKTSVTEPSQLNVWRSWQHPNFIHSV 585
           IIANK S          R W   NF ++V
Sbjct: 81  IIANKQSGAAAPDARTQRVWSQYNFTNNV 109


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 215 NALQSPSPALRQTLRPRRRWPPGT 144
           N+   P P +  T RP    PP T
Sbjct: 395 NSYSVPEPTISTTPRPEWARPPST 418


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +1

Query: 628 FNC-DGSVTEVLLAMISIFNVYNKDF 702
           + C DG +TE L     +FN Y+ ++
Sbjct: 56  YECNDGQITEKLCPDGMVFNDYSSEY 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,985
Number of Sequences: 336
Number of extensions: 3159
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)