Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00192
(728 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 110 1e-24
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 110 1e-24
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 110 1e-24
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 105 5e-23
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 105 5e-23
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 64 1e-14
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 69 5e-12
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 53 2e-07
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 53 3e-07
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 53 3e-07
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 53 3e-07
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 53 3e-07
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 53 3e-07
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 53 3e-07
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 53 3e-07
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 33 0.31
SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_16225| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 110 bits (265), Expect = 1e-24
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = +2
Query: 2 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 151
LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 377 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 110 bits (265), Expect = 1e-24
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = +2
Query: 2 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 151
LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 322 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 371
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 110 bits (265), Expect = 1e-24
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = +2
Query: 2 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 151
LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 377 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 105 bits (251), Expect = 5e-23
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = +2
Query: 2 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 151
LFKR+ EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM+DL++EYQQYQ
Sbjct: 142 LFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQYQ 191
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 105 bits (251), Expect = 5e-23
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = +2
Query: 2 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 151
LFKR+ EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM+DL++EYQQYQ
Sbjct: 204 LFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQYQ 253
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 64.1 bits (149), Expect(2) = 1e-14
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +2
Query: 5 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 115
F+R +EQF AMFRR+AFLHWYT EGMD +EFTE + N
Sbjct: 197 FRRFTEQFAAMFRRRAFLHWYTTEGMDPLEFTEIKRN 233
Score = 33.5 bits (73), Expect(2) = 1e-14
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +2
Query: 95 FTEAESNMNDLVSEYQQYQ 151
+ A+SN+NDL+SEYQQY+
Sbjct: 256 YFSADSNLNDLISEYQQYE 274
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 68.5 bits (160), Expect = 5e-12
Identities = 29/48 (60%), Positives = 37/48 (77%)
Frame = +2
Query: 2 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
LFKRI + MFRR+AFLHWYT EGMD +F EA++++ DL+S YQQ
Sbjct: 282 LFKRIRLHYKLMFRRRAFLHWYTEEGMDSQQFEEADNDILDLISTYQQ 329
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 53.2 bits (122), Expect = 2e-07
Identities = 19/45 (42%), Positives = 33/45 (73%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 188 RLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 53.2 bits (122), Expect = 2e-07
Identities = 19/45 (42%), Positives = 33/45 (73%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 88 RLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 132
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 374 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 418
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 542 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 586
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 327 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 371
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 761 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 805
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 1170 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 1214
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 375 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 419
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 806 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 850
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 355 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 399
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 823 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 867
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 975 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 1019
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 315 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 359
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 188 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 303 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 347
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 46.0 bits (104), Expect = 3e-05
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +2
Query: 38 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 13 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 48
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/46 (28%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 5 FKRISEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEY 139
F + ++F +++RKA +H YT +G++ +F + +++ L+ EY
Sbjct: 425 FVELKDRFMKLYKRKAHVHHYTHVDGLEVGQFDDGLESLSWLIQEY 470
>SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 481 SVYFRSAFTNFRSSSQRGLVEYQGM 407
S YF + FTN SQ+G++E QG+
Sbjct: 60 SDYFYAMFTNDMLESQKGVIELQGL 84
>SB_16225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 519
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -3
Query: 537 RYRILIRHFVLLHILCK*KVSILDQPLQISDLALNEAW-WNIKECIEQIVFVQIIC 373
R R + +FV+ + V++L P +I N AW +++ C+ IV V IIC
Sbjct: 58 RMRTITNYFVVSLAVSDLLVAMLSLPFRIHQTTHNTAWCLSLEACVAWIV-VDIIC 112
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,172,225
Number of Sequences: 59808
Number of extensions: 356986
Number of successful extensions: 819
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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