Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00192
(728 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 110 9e-25
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 110 9e-25
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 110 9e-25
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 110 9e-25
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 110 1e-24
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 110 1e-24
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 74 1e-13
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 74 1e-13
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 54 1e-07
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 54 1e-07
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 54 1e-07
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 54 1e-07
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 54 1e-07
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 54 1e-07
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 54 1e-07
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 53 2e-07
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 53 2e-07
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 53 2e-07
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 53 2e-07
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 53 2e-07
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 49 3e-06
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 110 bits (265), Expect = 9e-25
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = +2
Query: 2 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 151
LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 377 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 110 bits (265), Expect = 9e-25
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = +2
Query: 2 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 151
LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 377 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 110 bits (265), Expect = 9e-25
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = +2
Query: 2 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 151
LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 377 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 110 bits (265), Expect = 9e-25
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = +2
Query: 2 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 151
LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 377 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 110 bits (264), Expect = 1e-24
Identities = 49/50 (98%), Positives = 50/50 (100%)
Frame = +2
Query: 2 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 151
LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQ
Sbjct: 377 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQ 426
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 110 bits (264), Expect = 1e-24
Identities = 49/50 (98%), Positives = 50/50 (100%)
Frame = +2
Query: 2 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 151
LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQ
Sbjct: 377 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQ 426
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/48 (66%), Positives = 41/48 (85%)
Frame = +2
Query: 8 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 151
KRIS+QF +FRRKAFLHWYT M+E EFT+AE+ +NDL+SE+QQY+
Sbjct: 377 KRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQYE 421
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/48 (66%), Positives = 41/48 (85%)
Frame = +2
Query: 8 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 151
KRIS+QF +FRRKAFLHWYT M+E EFT+AE+ +NDL+SE+QQY+
Sbjct: 377 KRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQYE 421
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 54.0 bits (124), Expect = 1e-07
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +2
Query: 5 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
+ R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 386 WSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 54.0 bits (124), Expect = 1e-07
Identities = 20/45 (44%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 396 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 440
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 54.0 bits (124), Expect = 1e-07
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +2
Query: 5 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
+ R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 386 WSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 54.0 bits (124), Expect = 1e-07
Identities = 20/45 (44%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 54.0 bits (124), Expect = 1e-07
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +2
Query: 5 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
+ R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 386 WSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 54.0 bits (124), Expect = 1e-07
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +2
Query: 5 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
+ R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 386 WSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 54.0 bits (124), Expect = 1e-07
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +2
Query: 5 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
+ R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 386 WSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 54.0 bits (124), Expect = 1e-07
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +2
Query: 5 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
+ R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 386 WSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 54.0 bits (124), Expect = 1e-07
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +2
Query: 5 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
+ R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 23 WSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 54.0 bits (124), Expect = 1e-07
Identities = 20/45 (44%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 368 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 412
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 52.8 bits (121), Expect = 2e-07
Identities = 19/47 (40%), Positives = 34/47 (72%)
Frame = +2
Query: 5 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
++R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 383 WQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 52.8 bits (121), Expect = 2e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 52.8 bits (121), Expect = 2e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 395 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 439
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 52.8 bits (121), Expect = 2e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 389 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 52.8 bits (121), Expect = 2e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 52.8 bits (121), Expect = 2e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2
Query: 11 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 145
R+ +F M+ ++AF+HW+ GEGM+E EF EA ++ L +Y +
Sbjct: 393 RLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAE 437
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,342,775
Number of Sequences: 27780
Number of extensions: 275915
Number of successful extensions: 671
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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