Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00191
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    79   2e-16
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    24   5.9  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   7.7  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   7.7  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   7.7  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 78.6 bits (185), Expect = 2e-16
 Identities = 32/63 (50%), Positives = 43/63 (68%)
 Frame = +2

Query: 65  IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIXXXXXXXXECE 244
           +KDS+D   +L  AGD+LVV+DF ATWCGPCK+I PKL+E   + +D I        ECE
Sbjct: 5   VKDSEDFNNKLEAAGDQLVVVDFFATWCGPCKVIAPKLEEFQNKYADKIVVVKVDVDECE 64

Query: 245 DIA 253
           ++A
Sbjct: 65  ELA 67



 Score = 38.7 bits (86), Expect = 2e-04
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +1

Query: 256 EYNINSMPTFVFVKNGKKLDEFSGANVD 339
           +YNI SMPTF+F+K  + + +FSGAN +
Sbjct: 69  QYNIASMPTFLFIKRKEVVGQFSGANAE 96


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +3

Query: 174 NWTRSPPKCQIPSSXSRWTLMSARTSPRVQHQLDADVR 287
           N+T S   C +P + +RW +         +++ +AD+R
Sbjct: 442 NFTSSASSCFLPEAGARWDVSGVPIEMESKYR-NADIR 478


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 717 GEIIHLSNSDKNKKKTTIHTLKFLSTPLINKKPN 616
           GE++ +  S    K T ++ L F S P +   PN
Sbjct: 126 GELLAVMGSSGAGKTTLLNALAFRSPPGVKISPN 159


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 717 GEIIHLSNSDKNKKKTTIHTLKFLSTPLINKKPN 616
           GE++ +  S    K T ++ L F S P +   PN
Sbjct: 126 GELLAVMGSSGAGKTTLLNALAFRSPPGVKISPN 159


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 717 GEIIHLSNSDKNKKKTTIHTLKFLSTPLINKKPN 616
           GE++ +  S    K T ++ L F S P +   PN
Sbjct: 104 GELLAVMGSSGAGKTTLLNALAFRSPPGVKISPN 137


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,401
Number of Sequences: 2352
Number of extensions: 14393
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)