Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00191
(758 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 55 4e-08
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 51 7e-07
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 50 2e-06
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 49 3e-06
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 48 7e-06
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 48 9e-06
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 48 9e-06
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 47 1e-05
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 47 2e-05
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 47 2e-05
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 46 3e-05
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 45 5e-05
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 45 5e-05
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 45 5e-05
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 45 5e-05
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 45 6e-05
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 44 1e-04
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 43 2e-04
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 43 2e-04
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 43 2e-04
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 43 2e-04
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 43 3e-04
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 42 4e-04
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 40 0.002
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 40 0.002
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 39 0.004
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 39 0.004
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 38 0.005
At5g06690.1 68418.m00756 thioredoxin family protein low similiar... 36 0.022
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 36 0.022
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 36 0.022
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 36 0.029
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 36 0.029
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 36 0.039
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 36 0.039
At5g04260.1 68418.m00417 thioredoxin family protein low similari... 34 0.089
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 34 0.12
At1g11530.1 68414.m01324 thioredoxin family protein similar to t... 34 0.12
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 34 0.12
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 33 0.27
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 32 0.36
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 32 0.36
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 32 0.36
At1g76080.1 68414.m08835 thioredoxin family protein low similari... 32 0.36
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 31 1.1
At1g07700.3 68414.m00829 thioredoxin family protein low similari... 31 1.1
At1g07700.2 68414.m00827 thioredoxin family protein low similari... 31 1.1
At1g07700.1 68414.m00828 thioredoxin family protein low similari... 31 1.1
At4g04950.1 68417.m00719 thioredoxin family protein similar to P... 30 1.9
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 30 1.9
At5g60620.1 68418.m07608 phospholipid/glycerol acyltransferase f... 29 2.5
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 29 2.5
At4g32580.1 68417.m04638 thioredoxin family protein contains Pfa... 29 4.4
At4g31240.2 68417.m04435 expressed protein 28 7.7
At4g31240.1 68417.m04434 expressed protein 28 7.7
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 28 7.7
At1g15910.1 68414.m01908 XH/XS domain-containing protein / XS zi... 28 7.7
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Frame = +2
Query: 59 IHIKDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 205
+ IK+ + K+RL D KL+VI+F A WCGPCK + PKL+E+AA+ +D
Sbjct: 40 VEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTD 90
Score = 32.3 bits (70), Expect = 0.36
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 256 EYNINSMPTFVFVKNGKKLDEFSGANVD 339
E+N++++P VF+K G+++D G VD
Sbjct: 107 EFNLSTLPAIVFMKRGREVDMVVGVKVD 134
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 51.2 bits (117), Expect = 7e-07
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 71 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
D D + AGDK+VV+D WCGPCK+I PK E++ + D +
Sbjct: 84 DKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMV 130
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +2
Query: 47 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 196
P M I I ++ L +AGD+LV++DF TWCG C+ + PKL + A E
Sbjct: 93 PNM-IDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKE 141
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/37 (48%), Positives = 29/37 (78%)
Frame = +2
Query: 101 EAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
+ +KL+VIDF A WCGPCK + P++ EIA++ S+++
Sbjct: 40 KGSNKLLVIDFTAVWCGPCKAMEPRVREIASKYSEAV 76
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 259 YNINSMPTFVFVKNGKKLDEFSGANVD 339
Y ++P FVFVK G+++D GA D
Sbjct: 92 YRAITLPAFVFVKRGEEIDRVVGAKPD 118
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 62 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIXXXXXXXXEC 241
H D ++ A+ +KL+VIDF A+WC PC+MI P +++A + S E
Sbjct: 12 HTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDEL 71
Query: 242 EDIA 253
+ +A
Sbjct: 72 QSVA 75
Score = 35.5 bits (78), Expect = 0.039
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 256 EYNINSMPTFVFVKNGKKLDEFSGAN 333
E+ + +MPTFVF+K G+ +D+ GAN
Sbjct: 77 EFGVEAMPTFVFIKAGEVVDKLVGAN 102
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 47.6 bits (108), Expect = 9e-06
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 71 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
D D + AG+KLVV+D WCGPCK+I PK ++ + D +
Sbjct: 74 DKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVV 120
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 47.6 bits (108), Expect = 9e-06
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +2
Query: 95 LAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
L + DK V++DF ATWCGPC+++ P L+E++ + D I
Sbjct: 71 LLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDII 109
Score = 32.3 bits (70), Expect = 0.36
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 256 EYNINSMPTFVFVKNGKKLDEFSGA 330
+Y I ++PTF+ K+GK D F GA
Sbjct: 125 KYQIEALPTFILFKDGKLWDRFEGA 149
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2
Query: 53 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMS 202
+SIH + KT+ A+ +L+++ F ATWCGPC+ + P +A + S
Sbjct: 273 ISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHS 322
Score = 34.3 bits (75), Expect = 0.089
Identities = 12/25 (48%), Positives = 22/25 (88%)
Frame = +1
Query: 259 YNINSMPTFVFVKNGKKLDEFSGAN 333
+NI+S+PTF F+++GK++D+ GA+
Sbjct: 341 WNISSVPTFCFIRDGKEVDKVVGAD 365
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/55 (34%), Positives = 34/55 (61%)
Frame = +2
Query: 47 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E D +
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIV 156
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/55 (34%), Positives = 34/55 (61%)
Frame = +2
Query: 47 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E D +
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIV 156
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +2
Query: 59 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMS 202
I K+S D K A+ K+VV +F ATWCGPCK++ P E++ + S
Sbjct: 28 ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHS 75
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 259 YNINSMPTFVFVKNGKKLDEFSGAN 333
++I + PTF F+KNG+++ + GAN
Sbjct: 94 WDIKATPTFFFLKNGQQIGKLVGAN 118
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 45.2 bits (102), Expect = 5e-05
Identities = 16/32 (50%), Positives = 25/32 (78%)
Frame = +2
Query: 110 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 205
+KL+V+DF A+WCGPC+MI P + +A + +D
Sbjct: 47 NKLLVVDFSASWCGPCRMIEPAIHAMADKFND 78
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 256 EYNINSMPTFVFVKNGKKLDEFSGANVD 339
E+N+ +MPTFV VK GK+++ GA D
Sbjct: 95 EFNVTAMPTFVLVKRGKEIERIIGAKKD 122
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +2
Query: 65 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 190
+ DL L AGDKLVV+DF + CG CK + PK+ +IA
Sbjct: 98 VTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKIA 139
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 45.2 bits (102), Expect = 5e-05
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +2
Query: 110 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
DK V++D+ ATWCGPC+ + P L+E++ + D I
Sbjct: 81 DKPVLVDYYATWCGPCQFMVPILNEVSETLKDKI 114
Score = 31.5 bits (68), Expect = 0.63
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 256 EYNINSMPTFVFVKNGKKLDEFSGA 330
+Y I ++PTF+ K+G+ D F GA
Sbjct: 130 KYKIEALPTFILFKDGEPCDRFEGA 154
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +2
Query: 65 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
I + +L L AGDKLVV+DF + CG CK + PK+ + AEM+ +
Sbjct: 102 ISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQF-AEMNPDV 149
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 86 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
K + A KL+VIDF ATWC PC+ I P ++A + D +
Sbjct: 19 KLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 256 EYNINSMPTFVFVKNGKKLDEFSGA 330
E+ + +MPTF+F+K G+ + GA
Sbjct: 75 EFKVQAMPTFIFMKEGEIKETVVGA 99
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 44.0 bits (99), Expect = 1e-04
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +2
Query: 119 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
V+++F+ATWCGPCK+I P ++ ++ E D +
Sbjct: 90 VLVEFVATWCGPCKLIYPAMEALSQEYGDKL 120
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +2
Query: 59 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 190
+ I+ ++ L L AGD+LVV+DF + CG CK + PK+ ++A
Sbjct: 88 LEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQLA 131
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 119 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
VV+DF A WCGPCKMI P ++++A + I
Sbjct: 101 VVVDFWAPWCGPCKMIDPLVNDLAQHYTGKI 131
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +2
Query: 86 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
K + A KL+VIDF A+WC PC+ I P E+A + ++ +
Sbjct: 19 KVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 256 EYNINSMPTFVFVKNGKKLDEFSGANVD 339
E+ + +MPTFVF+K G +D GA D
Sbjct: 75 EFKVEAMPTFVFMKEGNIIDRVVGAAKD 102
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 74 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 190
+D L D+ V +DF A WCGPCKMI P ++E+A
Sbjct: 80 NDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELA 118
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/47 (38%), Positives = 34/47 (72%)
Frame = +2
Query: 62 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMS 202
++ DS+ +T++ E+ D V+++F A WCGPC+MI P +D++A + +
Sbjct: 90 NLSDSE-WQTKVLES-DVPVLVEFWAPWCGPCRMIHPIVDQLAKDFA 134
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +2
Query: 53 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEM 199
++ H ++ + + + A LVV+DF A+WCGPC+ I P ++A ++
Sbjct: 9 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKL 57
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 256 EYNINSMPTFVFVKNGKKLDEFSGANVD 339
++ I +MPTF+F+K GK LD+ GA D
Sbjct: 76 DWAIQAMPTFMFLKEGKILDKVVGAKKD 103
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 74 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE-MSDS 208
SD L + +G K V+++F A WCG C+ + P LDE+A SDS
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDS 425
Score = 37.5 bits (83), Expect = 0.010
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 119 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
+V++F A WCG CK + P+ ++ A+ +S ++
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNV 80
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 74 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE-MSDS 208
SD L + +G K V+++F A WCG C+ + P LDE+A SDS
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDS 425
Score = 37.5 bits (83), Expect = 0.010
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 119 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
+V++F A WCG CK + P+ ++ A+ +S ++
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNV 80
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +2
Query: 107 GDKLV--VIDFMATWCGPCKMIGPKLDEIAAE 196
GD+ V ++DF ATWCGPC ++ +L+ +A E
Sbjct: 91 GDRKVPLIVDFYATWCGPCILMAQELEMLAVE 122
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Frame = +2
Query: 32 VSIYLPKMSIHIKDSDDLKTRLAEAGD-------KLVVIDFMATWCGPCKMIGPKLDEIA 190
V+++ I ++++ +K +AE+ D K V+I+F A WCG C+ + P LDE+A
Sbjct: 357 VAVHKKSQPIPAENNEPVKVVVAESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVA 416
Score = 36.3 bits (80), Expect = 0.022
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +2
Query: 119 VVIDFMATWCGPCKMIGPKLDEIAAEMS 202
+V++F A WCG C+ + P+ ++ A+E+S
Sbjct: 49 IVVEFYAPWCGHCQKLAPEYEKAASELS 76
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 38.3 bits (85), Expect = 0.005
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 119 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
V+++F +WCGPC+M+ +DEIA + + +
Sbjct: 87 VLVEFYTSWCGPCRMVHRIIDEIAGDYAGKL 117
>At5g06690.1 68418.m00756 thioredoxin family protein low similiarity
to SP|P34723 Thioredoxin {Penicillium chrysogenum};
contains Pfam profile: PF00085 Thioredoxin
Length = 210
Score = 36.3 bits (80), Expect = 0.022
Identities = 12/29 (41%), Positives = 23/29 (79%)
Frame = +2
Query: 119 VVIDFMATWCGPCKMIGPKLDEIAAEMSD 205
++I++MA+WC C + PKL+++AAE ++
Sbjct: 121 IIIEWMASWCRKCIYLKPKLEKLAAEYNN 149
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +2
Query: 2 FAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLD 181
F F + L LVS + + DS + + DK +++F A WCG CK + P+ +
Sbjct: 8 FGFALLALLLVSAVADDVVVLTDDSFEKEV----GKDKGALVEFYAPWCGHCKKLAPEYE 63
Query: 182 EIAA 193
++ A
Sbjct: 64 KLGA 67
Score = 33.9 bits (74), Expect = 0.12
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 110 DKLVVIDFMATWCGPCKMIGPKLDEIA 190
+K V+++F A WCG CK + P +++A
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVA 185
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +2
Query: 2 FAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLD 181
F F + L LVS + + DS + + DK +++F A WCG CK + P+ +
Sbjct: 8 FGFALLALLLVSAVADDVVVLTDDSFEKEV----GKDKGALVEFYAPWCGHCKKLAPEYE 63
Query: 182 EIAA 193
++ A
Sbjct: 64 KLGA 67
Score = 33.9 bits (74), Expect = 0.12
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 110 DKLVVIDFMATWCGPCKMIGPKLDEIA 190
+K V+++F A WCG CK + P +++A
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVA 185
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 35.9 bits (79), Expect = 0.029
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 65 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMSD 205
+K ++ +++A D + V F A WCGPC+ I P + E++ + D
Sbjct: 89 VKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVIVELSKQYPD 137
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +2
Query: 65 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMSD 205
+K + + L++A D + V F A WCGPC++I P + E++ + D
Sbjct: 54 LKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELSNKYPD 102
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 35.5 bits (78), Expect = 0.039
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 113 KLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
K + + F A WCGPC+ P+L E+ E+S +
Sbjct: 44 KKIGLYFSAAWCGPCQRFTPQLVEVYNELSSKV 76
Score = 35.1 bits (77), Expect = 0.051
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 62 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 205
++ D K +++ K +++ F A WC PC+ PKL E+ ++ +
Sbjct: 347 YVLGKDGAKVLVSDLVGKTILMYFSAHWCPPCRAFTPKLVEVYKQIKE 394
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 35.5 bits (78), Expect = 0.039
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 119 VVIDFMATWCGPCKMIGPKLDEIA 190
+ +DF A WCG CK + P+LD A
Sbjct: 52 IFVDFYAPWCGHCKRLNPELDAAA 75
>At5g04260.1 68418.m00417 thioredoxin family protein low similarity
to SP|P29429 Thioredoxin. [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile: PF00085
Thioredoxin
Length = 192
Score = 34.3 bits (75), Expect = 0.089
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 119 VVIDFMATWCGPCKMIGPKLDEIAAE 196
VVI +MA WC C + PKL+++AAE
Sbjct: 101 VVIVWMAAWCRKCIYLKPKLEKLAAE 126
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +2
Query: 41 YLPKMSIH-IKDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
Y K +H + + + ++ EA K++V++F A+WC P K I P E+A+ + I
Sbjct: 36 YFIKGKVHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKTILPIYQELASTYTSMI 95
Score = 31.5 bits (68), Expect = 0.63
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +1
Query: 256 EYNINSMPTFVFVKNGKKLDEFSGAN 333
E+N+++ PT VF+K+G+++D+ G +
Sbjct: 110 EWNVDATPTVVFLKDGRQMDKLVGGD 135
>At1g11530.1 68414.m01324 thioredoxin family protein similar to
thioredoxin H-type from Arabidopsis thaliana SP|P29448,
Nicotiana tabacum SP|Q07090; contains Pfam profile:
PF00085 Thioredoxin
Length = 118
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 256 EYNINSMPTFVFVKNGKKLDEFSGANVD 339
+ + +MPTF+F+K+G +D+ GAN D
Sbjct: 72 QLEVKAMPTFLFLKDGNAMDKLVGANPD 99
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 47 PKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
P S+ + S D+L T E L +++F A WCG CK + P+ + A + +
Sbjct: 162 PSASVELNSSNFDELVTESKE----LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKV 214
Score = 31.9 bits (69), Expect = 0.48
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +2
Query: 116 LVVIDFMATWCGPCKMIGPKLDEIAAEM 199
+V+++F A WCG C+ + P +++A+ +
Sbjct: 48 VVLVEFFAPWCGHCQSLTPTWEKVASTL 75
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 32.7 bits (71), Expect = 0.27
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 116 LVVIDFMATWCGPCKMIGPKLDEIA 190
+V+++F A WCG CK + P +++A
Sbjct: 50 VVLVEFFAPWCGHCKALTPTWEKVA 74
Score = 32.3 bits (70), Expect = 0.36
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 110 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
++L +++F A WCG CK + P+ A + +
Sbjct: 180 NELWIVEFFAPWCGHCKKLAPEWKRAAKNLQGKV 213
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 32.3 bits (70), Expect = 0.36
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 110 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 205
++ V+++F A WCG C+ + P+ A E+ +
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKE 151
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 32.3 bits (70), Expect = 0.36
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 110 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 205
++ V+++F A WCG C+ + P+ A E+ +
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKE 151
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 32.3 bits (70), Expect = 0.36
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +1
Query: 256 EYNINSMPTFVFVKNGKKLDEFSGA 330
E+N+ + PT VF+K+G+++D+ GA
Sbjct: 56 EWNVEATPTVVFLKDGRQMDKLVGA 80
>At1g76080.1 68414.m08835 thioredoxin family protein low similarity
to thioredoxin (TRX) [Fasciola hepatica] GI:6687568;
contains Pfam profile PF00085: Thioredoxin
Length = 302
Score = 32.3 bits (70), Expect = 0.36
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 107 GDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 211
G KL+V+D CGPC + P + +++ MS+++
Sbjct: 206 GGKLIVLDVGLKHCGPCVKVYPTVLKLSRSMSETV 240
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 119 VVIDFMATWCGPCKMIGPKLDEIAAE 196
V++ F A WCGPC+ + P L+++ +E
Sbjct: 230 VMVMFTARWCGPCRDMIPILNKMDSE 255
>At1g07700.3 68414.m00829 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 217
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 68 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 205
K D+L + L ++ + LVV+DF T CG CK I ++ + D
Sbjct: 104 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGD 151
>At1g07700.2 68414.m00827 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 171
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 68 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 205
K D+L + L ++ + LVV+DF T CG CK I ++ + D
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGD 138
>At1g07700.1 68414.m00828 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 204
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 68 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 205
K D+L + L ++ + LVV+DF T CG CK I ++ + D
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGD 138
>At4g04950.1 68417.m00719 thioredoxin family protein similar to
PKCq-interacting protein PICOT from [Mus musculus]
GI:6840949, [Rattus norvegicus] GI:6840951; contains
Pfam profile PF00085: Thioredoxin
Length = 488
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 259 YNINSMPTFVFVKNGKKLDEFSGAN 333
Y++ ++P FVF K+GK +D GA+
Sbjct: 70 YSVAAVPYFVFFKDGKTVDTLEGAD 94
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/54 (20%), Positives = 28/54 (51%)
Frame = +2
Query: 92 RLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSIXXXXXXXXECEDIA 253
+L +++++ + + CGPC+ + P L+++ E + + E ++IA
Sbjct: 436 KLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHDVHFVEIDIEEDQEIA 489
>At5g60620.1 68418.m07608 phospholipid/glycerol acyltransferase
family protein contains Pfam PF01553: Acyltransferase
Length = 376
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +2
Query: 20 ILFLVSIYLPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPK 175
I+FL S+++P ++ +K D L+ ++ +++ F+A+W G K GP+
Sbjct: 109 IIFL-SLFIPVNAL-LKGQDRLRKKIERVLVEMICSFFVASWTGVVKYHGPR 158
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 29.5 bits (63), Expect = 2.5
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +2
Query: 110 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM 199
+ +++F A WCG C+ + P+ A E+
Sbjct: 116 NSFAMVEFYAPWCGACQALTPEYAAAATEL 145
>At4g32580.1 68417.m04638 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 160
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 259 YNINSMPTFVFVKNGKKLDEFSGAN 333
Y++ +P FVF K+GK +D GA+
Sbjct: 70 YSVALVPYFVFFKDGKTVDTLEGAD 94
>At4g31240.2 68417.m04435 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 113 KLVVIDFMATWCGPCKMIGPKL 178
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At4g31240.1 68417.m04434 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 113 KLVVIDFMATWCGPCKMIGPKL 178
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 77 DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMS 202
DD+K+ + A VI++ A+WCG C I P +++ S
Sbjct: 37 DDIKSSKSPA-----VINYGASWCGVCSQILPAFRKLSNSFS 73
>At1g15910.1 68414.m01908 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 634
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = -2
Query: 634 DKQKTKLEIQFGL*IIN*YLVLFIELFDYNRTNIFCIPEAANLKINIFKFITDVKNIFSS 455
D+Q KL+ ++G + N +E+ +YN + + PE N K + +V S+
Sbjct: 565 DEQLKKLKREWGKEVHNAVKTALVEMNEYNASGRYTTPELWNFKEGRKATLKEVITFISN 624
Query: 454 FIK 446
IK
Sbjct: 625 DIK 627
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,761,288
Number of Sequences: 28952
Number of extensions: 276912
Number of successful extensions: 721
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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