Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00190-2
         (364 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L06498-1|AAA60286.1|  119|Homo sapiens ribosomal protein S20 pro...    68   1e-11
BC087850-1|AAH87850.1|  119|Homo sapiens ribosomal protein S20 p...    68   1e-11
BC007507-1|AAH07507.1|  119|Homo sapiens ribosomal protein S20 p...    68   1e-11
AB061842-1|BAB79480.1|  119|Homo sapiens ribosomal protein S20 p...    68   1e-11
AB007156-1|BAA25820.1|   60|Homo sapiens ribosomal protein S20 p...    64   2e-10
BC037990-1|AAH37990.1|  894|Homo sapiens THADA protein protein.        28   7.8  
AY149633-1|AAO46789.1|  958|Homo sapiens death receptor interact...    28   7.8  
AY149632-1|AAO46788.1| 1063|Homo sapiens death receptor interact...    28   7.8  
AY149631-1|AAO46787.1| 1063|Homo sapiens death receptor interact...    28   7.8  
AY149630-1|AAO46786.1| 1097|Homo sapiens death receptor interact...    28   7.8  
AY149629-1|AAO46785.1| 1953|Homo sapiens death receptor interact...    28   7.8  
AK126004-1|BAC86389.1|  937|Homo sapiens protein ( Homo sapiens ...    28   7.8  
AC092615-1|AAX93152.1|  894|Homo sapiens unknown protein.              28   7.8  
AB051554-1|BAB21858.2| 1960|Homo sapiens KIAA1767 protein protein.     28   7.8  

>L06498-1|AAA60286.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 38/82 (46%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
 Frame = +3

Query: 120 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGARKQKLR*RAQSACQPRXXXX 296
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GA+++ L+ +       +    
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 297 XXXXXXXXXXQRPGDRFQMRIH 362
                      +  DRFQMRIH
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIH 85



 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = +2

Query: 233 SQETEAALKGPVRMPTKILRITTRKTPCGEGSKTWGSF 346
           ++E    +KGPVRMPTK LRITTRKTPCGEGSKTW  F
Sbjct: 43  AKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRF 80


>BC087850-1|AAH87850.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 38/82 (46%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
 Frame = +3

Query: 120 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGARKQKLR*RAQSACQPRXXXX 296
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GA+++ L+ +       +    
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 297 XXXXXXXXXXQRPGDRFQMRIH 362
                      +  DRFQMRIH
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIH 85



 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = +2

Query: 233 SQETEAALKGPVRMPTKILRITTRKTPCGEGSKTWGSF 346
           ++E    +KGPVRMPTK LRITTRKTPCGEGSKTW  F
Sbjct: 43  AKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRF 80


>BC007507-1|AAH07507.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 38/82 (46%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
 Frame = +3

Query: 120 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGARKQKLR*RAQSACQPRXXXX 296
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GA+++ L+ +       +    
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 297 XXXXXXXXXXQRPGDRFQMRIH 362
                      +  DRFQMRIH
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIH 85



 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = +2

Query: 233 SQETEAALKGPVRMPTKILRITTRKTPCGEGSKTWGSF 346
           ++E    +KGPVRMPTK LRITTRKTPCGEGSKTW  F
Sbjct: 43  AKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRF 80


>AB061842-1|BAB79480.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 38/82 (46%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
 Frame = +3

Query: 120 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGARKQKLR*RAQSACQPRXXXX 296
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GA+++ L+ +       +    
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 297 XXXXXXXXXXQRPGDRFQMRIH 362
                      +  DRFQMRIH
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIH 85



 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = +2

Query: 233 SQETEAALKGPVRMPTKILRITTRKTPCGEGSKTWGSF 346
           ++E    +KGPVRMPTK LRITTRKTPCGEGSKTW  F
Sbjct: 43  AKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRF 80


>AB007156-1|BAA25820.1|   60|Homo sapiens ribosomal protein S20
           protein.
          Length = 60

 Score = 63.7 bits (148), Expect = 2e-10
 Identities = 27/30 (90%), Positives = 27/30 (90%)
 Frame = +2

Query: 257 KGPVRMPTKILRITTRKTPCGEGSKTWGSF 346
           KGPVRMPTK LRITTRKTPCGEGSKTW  F
Sbjct: 1   KGPVRMPTKTLRITTRKTPCGEGSKTWDRF 30


>BC037990-1|AAH37990.1|  894|Homo sapiens THADA protein protein.
          Length = 894

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = -2

Query: 141 PGVSQCLCLTLQRLPCCLLNSGRDKQLFNQKLFSAEPE----KPHVSASLE 1
           PGV Q +C  L++L C +  S +      Q     EPE    K H S SL+
Sbjct: 676 PGVRQQICSLLKKLFCRIQESSQVLYKLEQSKSKREPENELTKQHPSVSLQ 726


>AY149633-1|AAO46789.1|  958|Homo sapiens death receptor interacting
           protein splice variant protein.
          Length = 958

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = -2

Query: 141 PGVSQCLCLTLQRLPCCLLNSGRDKQLFNQKLFSAEPE----KPHVSASLE 1
           PGV Q +C  L++L C +  S +      Q     EPE    K H S SL+
Sbjct: 386 PGVRQQICSLLKKLFCRIQESSQVLYKLEQSKSKREPENELTKQHPSVSLQ 436


>AY149632-1|AAO46788.1| 1063|Homo sapiens death receptor
           interacting/7p fusion protein protein.
          Length = 1063

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = -2

Query: 141 PGVSQCLCLTLQRLPCCLLNSGRDKQLFNQKLFSAEPE----KPHVSASLE 1
           PGV Q +C  L++L C +  S +      Q     EPE    K H S SL+
Sbjct: 386 PGVRQQICSLLKKLFCRIQESSQVLYKLEQSKSKREPENELTKQHPSVSLQ 436


>AY149631-1|AAO46787.1| 1063|Homo sapiens death receptor
           interacting/3p fusion protein splice variant protein.
          Length = 1063

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = -2

Query: 141 PGVSQCLCLTLQRLPCCLLNSGRDKQLFNQKLFSAEPE----KPHVSASLE 1
           PGV Q +C  L++L C +  S +      Q     EPE    K H S SL+
Sbjct: 386 PGVRQQICSLLKKLFCRIQESSQVLYKLEQSKSKREPENELTKQHPSVSLQ 436


>AY149630-1|AAO46786.1| 1097|Homo sapiens death receptor
           interacting/3p fusion protein protein.
          Length = 1097

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = -2

Query: 141 PGVSQCLCLTLQRLPCCLLNSGRDKQLFNQKLFSAEPE----KPHVSASLE 1
           PGV Q +C  L++L C +  S +      Q     EPE    K H S SL+
Sbjct: 386 PGVRQQICSLLKKLFCRIQESSQVLYKLEQSKSKREPENELTKQHPSVSLQ 436


>AY149629-1|AAO46785.1| 1953|Homo sapiens death receptor interacting
           protein protein.
          Length = 1953

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = -2

Query: 141 PGVSQCLCLTLQRLPCCLLNSGRDKQLFNQKLFSAEPE----KPHVSASLE 1
           PGV Q +C  L++L C +  S +      Q     EPE    K H S SL+
Sbjct: 676 PGVRQQICSLLKKLFCRIQESSQVLYKLEQSKSKREPENELTKQHPSVSLQ 726


>AK126004-1|BAC86389.1|  937|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44016 fis, clone TESTI4025797. ).
          Length = 937

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = -2

Query: 141 PGVSQCLCLTLQRLPCCLLNSGRDKQLFNQKLFSAEPE----KPHVSASLE 1
           PGV Q +C  L++L C +  S +      Q     EPE    K H S SL+
Sbjct: 676 PGVRQQICSLLKKLFCRIQESSQVLYKLEQSKSKREPENELTKQHPSVSLQ 726


>AC092615-1|AAX93152.1|  894|Homo sapiens unknown protein.
          Length = 894

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = -2

Query: 141 PGVSQCLCLTLQRLPCCLLNSGRDKQLFNQKLFSAEPE----KPHVSASLE 1
           PGV Q +C  L++L C +  S +      Q     EPE    K H S SL+
Sbjct: 676 PGVRQQICSLLKKLFCRIQESSQVLYKLEQSKSKREPENELTKQHPSVSLQ 726


>AB051554-1|BAB21858.2| 1960|Homo sapiens KIAA1767 protein protein.
          Length = 1960

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = -2

Query: 141 PGVSQCLCLTLQRLPCCLLNSGRDKQLFNQKLFSAEPE----KPHVSASLE 1
           PGV Q +C  L++L C +  S +      Q     EPE    K H S SL+
Sbjct: 683 PGVRQQICSLLKKLFCRIQESSQILYKLEQSKSKREPENELTKQHPSVSLQ 733


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,417,515
Number of Sequences: 237096
Number of extensions: 1220777
Number of successful extensions: 2127
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2123
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2248517154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)