Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00190-2
(364 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y11119-1|CAA72004.1| 120|Drosophila melanogaster S20 ribosomal ... 77 7e-15
AY071742-1|AAL49364.1| 120|Drosophila melanogaster RH47995p pro... 77 7e-15
AE014297-2870|AAF55809.1| 120|Drosophila melanogaster CG15693-P... 77 7e-15
AY071353-1|AAL48975.1| 120|Drosophila melanogaster RE38972p pro... 73 1e-13
AE014298-877|AAF46154.1| 1543|Drosophila melanogaster CG15894-PA... 29 1.8
BT004493-1|AAO42657.1| 648|Drosophila melanogaster GH27039p pro... 27 5.6
AE013599-1629|AAF58429.3| 648|Drosophila melanogaster CG3915-PB... 27 5.6
>Y11119-1|CAA72004.1| 120|Drosophila melanogaster S20 ribosomal
protein protein.
Length = 120
Score = 77.0 bits (181), Expect = 7e-15
Identities = 41/82 (50%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 120 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGARKQKLR*RAQSACQPRXXXX 296
KDIEKP + + +HRIRITLTSRNVRSLE VC DLINGA+ Q LR + +
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65
Query: 297 XXXXXXXXXXQRPGDRFQMRIH 362
+ DRFQMRIH
Sbjct: 66 TTRKTPCGEGSKTWDRFQMRIH 87
Score = 64.1 bits (149), Expect = 5e-11
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +2
Query: 254 LKGPVRMPTKILRITTRKTPCGEGSKTWGSF 346
+KGPVRMPTK LRITTRKTPCGEGSKTW F
Sbjct: 52 VKGPVRMPTKTLRITTRKTPCGEGSKTWDRF 82
>AY071742-1|AAL49364.1| 120|Drosophila melanogaster RH47995p
protein.
Length = 120
Score = 77.0 bits (181), Expect = 7e-15
Identities = 41/82 (50%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 120 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGARKQKLR*RAQSACQPRXXXX 296
KDIEKP + + +HRIRITLTSRNVRSLE VC DLINGA+ Q LR + +
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65
Query: 297 XXXXXXXXXXQRPGDRFQMRIH 362
+ DRFQMRIH
Sbjct: 66 TTRKTPCGEGSKTWDRFQMRIH 87
Score = 64.1 bits (149), Expect = 5e-11
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +2
Query: 254 LKGPVRMPTKILRITTRKTPCGEGSKTWGSF 346
+KGPVRMPTK LRITTRKTPCGEGSKTW F
Sbjct: 52 VKGPVRMPTKTLRITTRKTPCGEGSKTWDRF 82
>AE014297-2870|AAF55809.1| 120|Drosophila melanogaster CG15693-PA
protein.
Length = 120
Score = 77.0 bits (181), Expect = 7e-15
Identities = 41/82 (50%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 120 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGARKQKLR*RAQSACQPRXXXX 296
KDIEKP + + +HRIRITLTSRNVRSLE VC DLINGA+ Q LR + +
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65
Query: 297 XXXXXXXXXXQRPGDRFQMRIH 362
+ DRFQMRIH
Sbjct: 66 TTRKTPCGEGSKTWDRFQMRIH 87
Score = 64.1 bits (149), Expect = 5e-11
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +2
Query: 254 LKGPVRMPTKILRITTRKTPCGEGSKTWGSF 346
+KGPVRMPTK LRITTRKTPCGEGSKTW F
Sbjct: 52 VKGPVRMPTKTLRITTRKTPCGEGSKTWDRF 82
>AY071353-1|AAL48975.1| 120|Drosophila melanogaster RE38972p
protein.
Length = 120
Score = 72.9 bits (171), Expect = 1e-13
Identities = 40/82 (48%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +3
Query: 120 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGARKQKLR*RAQSACQPRXXXX 296
KDIEKP + + +H IRITLTSRNVRSLE VC DLINGA+ Q LR +
Sbjct: 6 KDIEKPHVGDSASVHCIRITLTSRNVRSLENVCRDLINGAKNQNLRVEGPVRMPTKTLRI 65
Query: 297 XXXXXXXXXXQRPGDRFQMRIH 362
+ DRFQMRIH
Sbjct: 66 TTRKTPCGEGSKTWDRFQMRIH 87
Score = 62.5 bits (145), Expect = 2e-10
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +2
Query: 254 LKGPVRMPTKILRITTRKTPCGEGSKTWGSF 346
++GPVRMPTK LRITTRKTPCGEGSKTW F
Sbjct: 52 VEGPVRMPTKTLRITTRKTPCGEGSKTWDRF 82
>AE014298-877|AAF46154.1| 1543|Drosophila melanogaster CG15894-PA
protein.
Length = 1543
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 121 KTLRNPRQRSPLFTASGSLLLLAMCAHSRRSVLT*SMEPGNRSCVKGPSP 270
+ + P Q +P+++ SL L R T S +PG R + PSP
Sbjct: 449 RVVEAPNQLAPVYSKPASLSLQGAPIEEHRLTPTASPKPGRRLTSRSPSP 498
>BT004493-1|AAO42657.1| 648|Drosophila melanogaster GH27039p
protein.
Length = 648
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 241 NRSCVKGPSPHANQDPAYHH 300
N+ C KG SP NQ PA H
Sbjct: 157 NKICAKGISPEPNQSPAPAH 176
>AE013599-1629|AAF58429.3| 648|Drosophila melanogaster CG3915-PB,
isoform B protein.
Length = 648
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 241 NRSCVKGPSPHANQDPAYHH 300
N+ C KG SP NQ PA H
Sbjct: 157 NKICAKGISPEPNQSPAPAH 176
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,083,277
Number of Sequences: 53049
Number of extensions: 353567
Number of successful extensions: 863
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 922092336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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