Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00189X
(548 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 139 2e-35
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 139 2e-35
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 127 6e-32
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 125 3e-31
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.58
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.58
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.58
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 2.3
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 21 5.4
EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 21 9.4
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 139 bits (336), Expect = 2e-35
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQ
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 139 bits (336), Expect = 2e-35
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQ
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 139 bits (336), Expect = 2e-35
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQ
Sbjct: 79 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 139 KESTLHLV 146
Score = 139 bits (336), Expect = 2e-35
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQ
Sbjct: 155 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 215 KESTLHLV 222
Score = 139 bits (336), Expect = 2e-35
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQ
Sbjct: 231 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 290
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 291 KESTLHLV 298
Score = 139 bits (336), Expect = 2e-35
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQ
Sbjct: 307 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 366
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 367 KESTLHLV 374
Score = 139 bits (336), Expect = 2e-35
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQ
Sbjct: 459 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 518
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 519 KESTLHLV 526
Score = 139 bits (336), Expect = 2e-35
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQ
Sbjct: 535 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 594
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 595 KESTLHLV 602
Score = 139 bits (336), Expect = 2e-35
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQ
Sbjct: 611 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 670
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 671 KESTLHLV 678
Score = 136 bits (330), Expect = 9e-35
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQR IFAGKQLEDGRTLSDYNIQ
Sbjct: 383 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQ 442
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 443 KESTLHLV 450
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 127 bits (307), Expect = 6e-32
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQ
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62
Query: 181 KE 186
KE
Sbjct: 63 KE 64
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 125 bits (301), Expect = 3e-31
Identities = 60/62 (96%), Positives = 61/62 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQR IFAGKQLEDGRTLSDYNIQ
Sbjct: 51 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQ 110
Query: 181 KE 186
KE
Sbjct: 111 KE 112
Score = 88.6 bits (210), Expect = 3e-20
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +1
Query: 79 KIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 204
KIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 1 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 42
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.58
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -1
Query: 548 LSSDTVSRFYLKSTYTAVSSVLYRLEGTYLFVVVFEDHRAVTLPAVVTVLHHR 390
L S TV + T VS + L GTY ++F +V L VV HHR
Sbjct: 250 LLSLTVFLNLVAETLPQVSDAIPLL-GTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.58
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -1
Query: 548 LSSDTVSRFYLKSTYTAVSSVLYRLEGTYLFVVVFEDHRAVTLPAVVTVLHHR 390
L S TV + T VS + L GTY ++F +V L VV HHR
Sbjct: 250 LLSLTVFLNLVAETLPQVSDAIPLL-GTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.58
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -1
Query: 548 LSSDTVSRFYLKSTYTAVSSVLYRLEGTYLFVVVFEDHRAVTLPAVVTVLHHR 390
L S TV + T VS + L GTY ++F +V L VV HHR
Sbjct: 250 LLSLTVFLNLVAETLPQVSDAIPLL-GTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 476 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 390
L GTY ++F +V L VV HHR
Sbjct: 273 LIGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 476 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 390
L GTY ++F +V L VV HHR
Sbjct: 273 LIGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 22.6 bits (46), Expect = 2.3
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -2
Query: 220 HHEASTPGGGWIPSGYCSPR 161
HH P GG P G PR
Sbjct: 63 HHYGGPPSGGQPPQGMPYPR 82
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 21.4 bits (43), Expect = 5.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 192 GGFLLDIVVREGTSIFQLLSS 130
GGFLL VV+ G ++ LSS
Sbjct: 108 GGFLLCKVVKYGQTLGPYLSS 128
>EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B
protein.
Length = 279
Score = 20.6 bits (41), Expect = 9.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 233 ARRGITPPQEDQAQEEERQ 289
+RR PP+ Q +EEE +
Sbjct: 261 SRRKPRPPRPTQVEEEEEK 279
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,461
Number of Sequences: 336
Number of extensions: 2768
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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