Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00189X
(548 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 133 6e-32
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 133 6e-32
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 133 6e-32
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 133 6e-32
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 133 6e-32
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 133 6e-32
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 133 6e-32
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 133 6e-32
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 133 6e-32
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 133 6e-32
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 133 6e-32
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 133 6e-32
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 133 6e-32
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 133 6e-32
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 133 6e-32
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 133 6e-32
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 133 6e-32
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 133 6e-32
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 133 6e-32
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 133 6e-32
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 132 1e-31
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 132 2e-31
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 126 1e-29
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 110 7e-25
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 82 2e-16
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 64 4e-11
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 64 8e-11
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 58 5e-09
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 52 2e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 52 2e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 52 3e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 48 3e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 47 7e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 47 7e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 46 1e-05
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 46 2e-05
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 46 2e-05
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 46 2e-05
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 46 2e-05
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 46 2e-05
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 46 2e-05
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 45 4e-05
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 44 5e-05
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 44 5e-05
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 43 2e-04
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 43 2e-04
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 42 2e-04
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 42 3e-04
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 41 5e-04
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 40 0.001
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 40 0.001
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 39 0.002
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 39 0.002
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 39 0.003
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 37 0.008
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 37 0.010
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 35 0.031
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 35 0.041
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 35 0.041
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 33 0.095
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 33 0.17
At1g11970.1 68414.m01383 hypothetical protein 32 0.22
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 31 0.38
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 31 0.38
At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal... 30 1.2
At2g25840.2 68415.m03101 tRNA synthetase class I (W and Y) famil... 30 1.2
At2g25840.1 68415.m03100 tRNA synthetase class I (W and Y) famil... 30 1.2
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 1.2
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 30 1.2
At5g12280.1 68418.m01444 hypothetical protein 29 1.5
At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal... 29 2.0
At1g47680.1 68414.m05297 hypothetical protein 29 2.0
At5g20830.1 68418.m02474 sucrose synthase / sucrose-UDP glucosyl... 28 4.7
At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal... 28 4.7
At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming] beta-... 27 6.2
At2g20130.1 68415.m02352 expressed protein contains Pfam domain,... 27 8.3
At1g78020.1 68414.m09092 senescence-associated protein-related s... 27 8.3
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 139 KESTLHLV 146
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 215 KESTLHLV 222
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 291 KESTLHLV 298
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 366
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 367 KESTLHLV 374
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 139 KESTLHLV 146
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 215 KESTLHLV 222
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 291 KESTLHLV 298
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 139 KESTLHLV 146
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 215 KESTLHLV 222
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 291 KESTLHLV 298
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 139 KESTLHLV 146
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 215 KESTLHLV 222
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 96
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 31.9 bits (69), Expect = 0.29
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +2
Query: 74 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRN 232
K K + K L + S LESS +MDV TT SRR+ TW FVV ++
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 307
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 139 KESTLHLV 146
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 215 KESTLHLV 222
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 291 KESTLHLV 298
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 366
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 367 KESTLHLV 374
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 96
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 31.9 bits (69), Expect = 0.29
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +2
Query: 74 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRN 232
K K + K L + S LESS +MDV TT SRR+ TW FVV ++
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 139 KESTLHLV 146
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 215 KESTLHLV 222
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 291 KESTLHLV 298
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 96
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 31.9 bits (69), Expect = 0.29
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +2
Query: 74 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRN 232
K K + K L + S LESS +MDV TT SRR+ TW FVV ++
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 139 KESTLHLV 146
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 215 KESTLHLV 222
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 291 KESTLHLV 298
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 366
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 367 KESTLHLV 374
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 96
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 383 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 31.9 bits (69), Expect = 0.29
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +2
Query: 74 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRN 232
K K + K L + S LESS +MDV TT SRR+ TW FVV ++
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 139 KESTLHLV 146
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 215 KESTLHLV 222
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 291 KESTLHLV 298
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 96
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 307 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 31.9 bits (69), Expect = 0.29
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +2
Query: 74 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVVALRN 232
K K + K L + S LESS +MDV TT SRR+ TW FVV ++
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 139 KESTLHLV 146
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 215 KESTLHLV 222
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 139 KESTLHLV 146
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 215 KESTLHLV 222
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 291 KESTLHLV 298
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 139 KESTLHLV 146
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 215 KESTLHLV 222
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 139 KESTLHLV 146
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 215 KESTLHLV 222
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 231 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 290
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 291 KESTLHLV 298
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 74.5 bits (175), Expect = 4e-14
Identities = 31/54 (57%), Positives = 38/54 (70%)
Frame = +3
Query: 291 LTVLRFYKVDEHGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDD 452
L VL+FYK+D GK+ RLR+EC CGAG FMA DRHYCGKC T V++ +
Sbjct: 100 LAVLQFYKIDGSGKVQRLRKECPNATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 74.9 bits (176), Expect = 3e-14
Identities = 32/54 (59%), Positives = 38/54 (70%)
Frame = +3
Query: 291 LTVLRFYKVDEHGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDD 452
L VL+FYKVD GK+ RLR+EC CGAG FMA DRHYCGKC T V++ +
Sbjct: 100 LAVLQFYKVDGSGKVQRLRKECPNATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 91.9 bits (218), Expect = 3e-19
Identities = 41/68 (60%), Positives = 54/68 (79%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138
Query: 181 KESTLHLV 204
S LHLV
Sbjct: 139 GGSVLHLV 146
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 130 bits (314), Expect = 6e-31
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKE IPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 154 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQ 213
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 214 KESTLHLV 221
Score = 126 bits (304), Expect = 1e-29
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+D NIQ
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQ 137
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 138 KESTLHLV 145
Score = 95.1 bits (226), Expect = 3e-20
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 153
IFVKTLTGKTITLEVE S TI+NVKAKIQDKEGIPP+QQRLIFAGKQLE G
Sbjct: 230 IFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/68 (61%), Positives = 55/68 (80%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 181 KESTLHLV 204
S LHLV
Sbjct: 139 GGSVLHLV 146
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 133 bits (322), Expect = 6e-32
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 63 KESTLHLV 70
Score = 77.0 bits (181), Expect = 8e-15
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = +3
Query: 291 LTVLRFYKVDEHGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDDDK 458
L VL+FYKVD GK+ RL++EC CG G FMA DRHYCGKC +T VFK D+
Sbjct: 100 LAVLQFYKVDGSGKVQRLKKECPSVSCGPGTFMASHFDRHYCGKCGTTYVFKKADE 155
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 132 bits (319), Expect = 1e-31
Identities = 63/68 (92%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 79 IFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 138
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 139 KESTLHLV 146
Score = 127 bits (307), Expect = 4e-30
Identities = 62/68 (91%), Positives = 65/68 (95%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI P+QQRLIFAGKQ EDGRTL+DYNIQ
Sbjct: 155 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQ 214
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 215 KESTLHLV 222
Score = 118 bits (283), Expect = 3e-27
Identities = 55/68 (80%), Positives = 63/68 (92%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IF+KTLTGKT LEVE SDTI+NVKAKIQD EGIPP+Q RLIFAGKQLEDGRTL+DYN+Q
Sbjct: 3 IFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQ 62
Query: 181 KESTLHLV 204
++STLHL+
Sbjct: 63 EDSTLHLL 70
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 132 bits (318), Expect = 2e-31
Identities = 62/68 (91%), Positives = 67/68 (98%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PP+QQRLIFAGKQL+DGRTL+DYNIQ
Sbjct: 81 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQ 140
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 141 KESTLHLV 148
Score = 125 bits (301), Expect = 2e-29
Identities = 60/68 (88%), Positives = 64/68 (94%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFV+TLT KTI LEVE SDT +NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 157 IFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 216
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 217 KESTLHLV 224
Score = 116 bits (279), Expect = 1e-26
Identities = 59/69 (85%), Positives = 63/69 (91%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG-RTLSDYNI 177
IFV TLTGKTITLEVE SDTI+NVKAKIQDKE I P+QQRLIFAG+QLEDG TL+DYNI
Sbjct: 233 IFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNI 292
Query: 178 QKESTLHLV 204
QKESTLHLV
Sbjct: 293 QKESTLHLV 301
Score = 100 bits (240), Expect = 6e-22
Identities = 49/67 (73%), Positives = 57/67 (85%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
I KTLT KTIT++V SDTI NVKAKIQD EGIP +QQRLIF+GK L+DGRTL+DY+IQ
Sbjct: 5 IHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQ 64
Query: 181 KESTLHL 201
K+S LHL
Sbjct: 65 KDSILHL 71
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 126 bits (303), Expect = 1e-29
Identities = 61/68 (89%), Positives = 65/68 (95%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFV+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 81 IFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQ 140
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 141 KESTLHLV 148
Score = 115 bits (276), Expect = 2e-26
Identities = 56/68 (82%), Positives = 62/68 (91%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
I+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP +QQRLIFAGKQLEDG TL+DYNIQ
Sbjct: 5 IYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQ 64
Query: 181 KESTLHLV 204
KESTLHLV
Sbjct: 65 KESTLHLV 72
Score = 102 bits (245), Expect = 1e-22
Identities = 51/68 (75%), Positives = 57/68 (83%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IF+KTLTGKTI LEVE SDTI NVK KIQ KEGI P+QQ LIF G+QLEDG TL DY+I
Sbjct: 554 IFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDIH 613
Query: 181 KESTLHLV 204
K+STL+LV
Sbjct: 614 KKSTLYLV 621
Score = 102 bits (244), Expect = 2e-22
Identities = 53/70 (75%), Positives = 58/70 (82%), Gaps = 2/70 (2%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP--NQQRLIFAGKQLEDGRTLSDYN 174
IFVKTLT K I LEVE DTIENVKA +QDKEGI P N QRLIF GK+L+DG TL+DY+
Sbjct: 321 IFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYS 380
Query: 175 IQKESTLHLV 204
IQKESTLHLV
Sbjct: 381 IQKESTLHLV 390
Score = 97.9 bits (233), Expect = 4e-21
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFVK GK ITLEV SDTI++VKAKIQDK G PP+QQ L+F G QL+DGRTL DYNI+
Sbjct: 395 IFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIR 454
Query: 181 KESTLHL 201
ESTLHL
Sbjct: 455 NESTLHL 461
Score = 90.6 bits (215), Expect = 6e-19
Identities = 49/73 (67%), Positives = 55/73 (75%), Gaps = 5/73 (6%)
Frame = +1
Query: 1 IFVKTL-----TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLS 165
IFVK L TG+ LEVE SDTI+NVKAK+QDKE IP + RLIFAGK LE GRTL+
Sbjct: 240 IFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLA 299
Query: 166 DYNIQKESTLHLV 204
YNIQK STL+LV
Sbjct: 300 HYNIQKGSTLYLV 312
Score = 85.4 bits (202), Expect = 2e-17
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1
Query: 10 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKES 189
+T T KTITLEVE SDTI+NVK KIQ K GIP ++QRLIF G+ L RTL DYNIQK S
Sbjct: 481 ETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGS 540
Query: 190 TLH 198
T+H
Sbjct: 541 TIH 543
Score = 85.0 bits (201), Expect = 3e-17
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 7/74 (9%)
Frame = +1
Query: 1 IFVKTLTGK-----TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL--EDGRT 159
IFV T +GK T+TL+VE SDTIENVKAKIQD+EG+ P+ QRLIF G++L ED RT
Sbjct: 157 IFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNRT 216
Query: 160 LSDYNIQKESTLHL 201
L+DY I+ STL L
Sbjct: 217 LADYGIRNRSTLCL 230
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 110 bits (264), Expect = 7e-25
Identities = 51/68 (75%), Positives = 59/68 (86%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP +QQRLIF GKQLEDG TL+DYNIQ
Sbjct: 88 IFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYNIQ 147
Query: 181 KESTLHLV 204
+S LHL+
Sbjct: 148 NDSILHLI 155
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 82.2 bits (194), Expect = 2e-16
Identities = 37/68 (54%), Positives = 50/68 (73%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN++
Sbjct: 3 IKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLE 62
Query: 181 KESTLHLV 204
+ S LHLV
Sbjct: 63 RGSVLHLV 70
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 64.5 bits (150), Expect = 4e-11
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 138
IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP QQRLIF G+
Sbjct: 52 IFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97
Score = 61.3 bits (142), Expect = 4e-10
Identities = 30/65 (46%), Positives = 44/65 (67%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
IFV T+ KT LEV+ SDTI+ +K+ I D+ G P +QQ L G +L++ T+SDYNI+
Sbjct: 143 IFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYNIK 202
Query: 181 KESTL 195
++ L
Sbjct: 203 PDANL 207
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 63.7 bits (148), Expect = 8e-11
Identities = 28/66 (42%), Positives = 43/66 (65%)
Frame = +1
Query: 7 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 186
+KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+++
Sbjct: 28 IKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYHLENG 87
Query: 187 STLHLV 204
TLHL+
Sbjct: 88 HTLHLI 93
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 57.6 bits (133), Expect = 5e-09
Identities = 28/69 (40%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 IFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 177
IFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y+I
Sbjct: 97 IFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYYSI 156
Query: 178 QKESTLHLV 204
+++++L LV
Sbjct: 157 EQDASLQLV 165
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 52.4 bits (120), Expect = 2e-07
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYN 174
IFVKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D TL + N
Sbjct: 3 IFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEENN 62
Query: 175 IQKES 189
+ + S
Sbjct: 63 VVENS 67
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = +1
Query: 7 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 186
++ G +++ T+E+ K + +P NQQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 187 STLHLV 204
T+H+V
Sbjct: 82 HTIHMV 87
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +1
Query: 7 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 186
V+ G ++ T+E+ K I +P NQQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 187 STLHLV 204
T+H+V
Sbjct: 82 HTVHMV 87
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 48.4 bits (110), Expect = 3e-06
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
+++ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY I
Sbjct: 3 VYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMIL 62
Query: 181 KESTLHL 201
ES L L
Sbjct: 63 FESRLLL 69
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 47.2 bits (107), Expect = 7e-06
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSDY 171
IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+ +
Sbjct: 3 IFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEEN 62
Query: 172 NIQKES 189
+ + S
Sbjct: 63 KVAENS 68
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 47.2 bits (107), Expect = 7e-06
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSDY 171
IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+ +
Sbjct: 3 IFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEEN 62
Query: 172 NIQKES 189
+ + S
Sbjct: 63 KVAENS 68
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 46.4 bits (105), Expect = 1e-05
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYNI 177
I +K L T TL VE + + ++K I G+ P +Q RL+F G+ L++ + LSDY++
Sbjct: 13 IKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDYHV 72
Query: 178 QKESTLHLV 204
++ TL+LV
Sbjct: 73 EEGHTLYLV 81
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/68 (30%), Positives = 41/68 (60%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
I V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS ++
Sbjct: 3 ITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALGVK 62
Query: 181 KESTLHLV 204
+ L ++
Sbjct: 63 DDDLLMMM 70
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +1
Query: 7 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSDYNI 177
VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L + +
Sbjct: 5 VKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKV 64
Query: 178 QKESTL 195
+E L
Sbjct: 65 TEEGFL 70
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +1
Query: 7 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSDYNI 177
VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L + +
Sbjct: 5 VKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKV 64
Query: 178 QKESTL 195
+E L
Sbjct: 65 TEEGFL 70
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +1
Query: 7 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSDYNI 177
VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L + +
Sbjct: 5 VKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKV 64
Query: 178 QKESTL 195
+E L
Sbjct: 65 TEEGFL 70
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +1
Query: 7 VKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPNQQRLIFAGKQLEDGRTLSDYNI 177
VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D TL + +
Sbjct: 5 VKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLVENKV 64
Query: 178 QKESTL 195
+E L
Sbjct: 65 TEEGFL 70
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +1
Query: 7 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 186
+ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY I E
Sbjct: 5 IDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFE 64
Query: 187 STL 195
S L
Sbjct: 65 SLL 67
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 44.8 bits (101), Expect = 4e-05
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +1
Query: 7 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 186
V+ +G T ++++ DT+ K KI+ + IP ++Q + F GK LED + +++I +
Sbjct: 5 VENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDILQN 64
Query: 187 STLHL 201
LHL
Sbjct: 65 PLLHL 69
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 7 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
VKT GK VE I VK +I K G + P++Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 181 KESTLHLV 204
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 7 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
VKT GK VE I VK +I K G + P++Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 181 KESTLHLV 204
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +1
Query: 22 GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 201
GK+I L V P T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 202 V 204
+
Sbjct: 604 M 604
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYNI 177
I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L+ N+
Sbjct: 663 IIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQNV 722
Query: 178 QKESTLHLV 204
Q S +HL+
Sbjct: 723 QPNSLVHLI 731
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 42.3 bits (95), Expect = 2e-04
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +1
Query: 4 FVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
FV+ L GK++TL P E +K +I ++ IP + QRLI G Q+ DG +S Q
Sbjct: 12 FVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS----Q 67
Query: 181 KESTLHLV 204
++T++LV
Sbjct: 68 PDATVNLV 75
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
+F +T +G T +E+ DT+ +K KI+ + IP ++Q L+F G L+D + I
Sbjct: 3 VFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCVIL 62
Query: 181 KESTLHL 201
S + L
Sbjct: 63 NHSRIQL 69
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYNI 177
I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++ N+
Sbjct: 502 IKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQNV 561
Query: 178 QKESTLHLV 204
Q S +HL+
Sbjct: 562 QPNSLVHLL 570
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 39.5 bits (88), Expect = 0.001
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE---GIPPNQQRLIFAGKQLEDGRTLSDY 171
I V+T+ GK L VE S + VK +I KE GIP + + L G++L+D R ++D
Sbjct: 111 ISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDL 169
Query: 172 NIQKESTLHLV 204
++ +HL+
Sbjct: 170 CQNGDNVIHLL 180
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK---QLEDGRTLSDY 171
+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+ DY
Sbjct: 3 VFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMDDY 62
Query: 172 NIQKESTLHL 201
I+ H+
Sbjct: 63 KIKACDIFHM 72
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
+ ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D + I+
Sbjct: 4 VIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIR 63
Query: 181 KESTLHL 201
S + L
Sbjct: 64 HNSRILL 70
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 180
+ ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D + I+
Sbjct: 38 VIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIR 97
Query: 181 KESTLHL 201
S + L
Sbjct: 98 HNSRILL 104
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSDY 171
I VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D T+
Sbjct: 3 IIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTMEAN 62
Query: 172 NIQKESTLHLV 204
+ +S + ++
Sbjct: 63 KVFDKSVIAII 73
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 108
IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 51 IFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 36.7 bits (81), Expect = 0.010
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 150
+F +T +G +E+ DT+ +K KI+ + IP ++Q LIF G L+D
Sbjct: 3 VFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 35.1 bits (77), Expect = 0.031
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +1
Query: 7 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 135
V+ L G + +EVE +DT+ VK KI+ + +P ++Q LI G
Sbjct: 5 VEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 34.7 bits (76), Expect = 0.041
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 37 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 150
L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 34.7 bits (76), Expect = 0.041
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +1
Query: 7 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 135
V+ L G + LEV+ DT+ VK KI+ + IP ++Q LI G
Sbjct: 5 VENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 33.5 bits (73), Expect = 0.095
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 159
+FV+T TG + LE++ SD VK K+Q P + L F L++ T
Sbjct: 43 VFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 32.7 bits (71), Expect = 0.17
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 7 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 150
V T++ + + ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 32.3 bits (70), Expect = 0.22
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 16 LTGKTITLEVEPSDTIENVKAKIQDKEGIP 105
L+ K I +E++P D IE +K I+++ GIP
Sbjct: 50 LSEKKIDIEIDPMDKIEQIKEGIEEEIGIP 79
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 31.5 bits (68), Expect = 0.38
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +1
Query: 37 LEVEPSD-TIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG----RTLSDYNIQKESTL 195
LEVE + T+ ++ ++ + G+ P +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 31.5 bits (68), Expect = 0.38
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 1 IFVKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPP-NQQRLIFAGKQLEDGRTLSDYN 174
+ V T GK V+ + +K +I ++ +G P + Q ++F G++L+D R +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 175 IQKESTLHLV 204
S +HL+
Sbjct: 173 KDGNSVIHLL 182
>At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to Chain A,
Glycolate Oxidase (E.C.1.1.3.15) Mutant With Tyr 24
Replaced By Phe (Y24f) gi|999542
Length = 363
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -3
Query: 204 HQVEGGF--LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 85
H V+G LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 272 HAVKGRIPVLLDGGVRRGTDVFKALALGAQAVLIGRPIVYGL 313
>At2g25840.2 68415.m03101 tRNA synthetase class I (W and Y) family
protein contains Pfam profile: PF00579 tRNA synthetases
class I (W and Y)
Length = 412
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 476 LEGTYLFVVVFEDHRAVTLPAVVTVLHHRHEHTGAALLACAL 351
L+ TY + + DH A+TLP L T A LAC +
Sbjct: 92 LQDTYETLFIIVDHHAITLPYDTRQLGKATTDTAALYLACGI 133
>At2g25840.1 68415.m03100 tRNA synthetase class I (W and Y) family
protein contains Pfam profile: PF00579 tRNA synthetases
class I (W and Y)
Length = 408
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 476 LEGTYLFVVVFEDHRAVTLPAVVTVLHHRHEHTGAALLACAL 351
L+ TY + + DH A+TLP L T A LAC +
Sbjct: 92 LQDTYETLFIIVDHHAITLPYDTRQLGKATTDTAALYLACGI 133
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
Frame = +1
Query: 52 SDTIENVKAKI-----QDKEGIPP--NQQRLIFAGKQLEDGRTLSD 168
S T+ ++K K+ +DKE P N +LI AGK LE+ RTL++
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAE 73
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 52 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 177
S+ + ++K KI + IP N+Q+L L+D +L+ YN+
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNV 767
>At5g12280.1 68418.m01444 hypothetical protein
Length = 419
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 25 KTITLEVEP-SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 177
K + + V+ S+ + ++K KI + P N+Q+L L+D +L+ YN+
Sbjct: 357 KVVKITVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
>At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 363
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -3
Query: 183 LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 85
LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 281 LLDGGVRRGTDVFKALALGAQAVLIGRPIIYGL 313
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 46 EPSDTIENVKAKIQDKEG-IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 201
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At5g20830.1 68418.m02474 sucrose synthase / sucrose-UDP
glucosyltransferase (SUS1) identical to SP|P49040
Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP
glucosyltransferase) {Arabidopsis thaliana}
Length = 808
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -1
Query: 536 TVSRFYLKSTYTAVSSVLYRLEGTYLFVVVFEDHRAVTLPAVVTVLH 396
T F + T ++S + G+ V +E H A TLP + V+H
Sbjct: 466 TADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVH 512
>At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 368
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 180 LDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 85
LD VR GT +F+ L+ + +GR SLF L
Sbjct: 284 LDGGVRRGTDVFKALALGASGVFVGRPSLFSL 315
>At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial, putative / succinyl-CoA
synthetase, beta chain, putative / SCS-beta, putative
identical to SP|O82662 Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor (EC 6.2.1.4)
(Succinyl-CoA synthetase, beta chain) (SCS- beta)
{Arabidopsis thaliana}; similar to SP|O97580
Succinyl-CoA ligase [ADP-forming] beta-chain,
mitochondrial precursor (EC 6.2.1.5) {Sus scrofa};
contains Pfam profiles PF00549: CoA-ligase, PF02222:
ATP-grasp domain
Length = 421
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 52 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 204
+ ++E VK IQD + PN+ L+ + L GR L + + +H+V
Sbjct: 51 ASSLEEVKKAIQD---VFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIV 98
>At2g20130.1 68415.m02352 expressed protein contains Pfam domain,
PF04367: Protein of unknown function (DUF502)
Length = 256
Score = 27.1 bits (57), Expect = 8.3
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -3
Query: 240 LLAFLSATTKPQHQVEGGFLLDIVVREGTSIFQLLSSKDQPLL-IGRDS 97
LL + +P V G ++IVV G S+ Q+LS+ D+PL IG +S
Sbjct: 210 LLVNSNDVIRPNLSVREG--IEIVVSGGMSMPQILSTLDKPLASIGNES 256
>At1g78020.1 68414.m09092 senescence-associated protein-related
similar to senescence-associated protein SAG102
(GI:22331931) [Arabidopsis thaliana]
Length = 162
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 92 KRESLPINRG*SLLESSWKMDVPSRTTISRRNPPS 196
KR+ PINR SL E + +++PS + S + P+
Sbjct: 5 KRQRPPINRTTSLSEIKFDLNLPSESEPSNQQKPT 39
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,489,309
Number of Sequences: 28952
Number of extensions: 268503
Number of successful extensions: 895
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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