Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00188
(786 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 142 5e-34
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 142 5e-34
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 142 5e-34
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 135 6e-32
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 132 4e-31
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 120 3e-27
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 142 bits (344), Expect = 5e-34
Identities = 68/85 (80%), Positives = 74/85 (87%)
Frame = +1
Query: 1 KGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 180
KG KKK+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADL
Sbjct: 15 KGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADL 74
Query: 181 QADTDAERSFRKFRLIAEYVQGRNV 255
Q D D ERSFRKFRLIAE VQ RNV
Sbjct: 75 QKDIDPERSFRKFRLIAEDVQDRNV 99
Score = 139 bits (337), Expect = 3e-33
Identities = 69/114 (60%), Positives = 83/114 (72%)
Frame = +3
Query: 255 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 434
LCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYA
Sbjct: 100 LCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYA 159
Query: 435 QHTQVRAIRKKMCEIITRDVTNSELGRW*TS*FLTPLPRTSRRPAMASTLCAMF 596
Q +QVR IR +M +IIT +V+ ++L + TS T L + S++ A MF
Sbjct: 160 QQSQVRKIRARMTDIITNEVSGADLKQLLTSWPWTRLRKISKKAVSAYIHYMMF 213
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 142 bits (344), Expect = 5e-34
Identities = 68/85 (80%), Positives = 74/85 (87%)
Frame = +1
Query: 1 KGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 180
KG KKK+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADL
Sbjct: 15 KGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADL 74
Query: 181 QADTDAERSFRKFRLIAEYVQGRNV 255
Q D D ERSFRKFRLIAE VQ RNV
Sbjct: 75 QKDIDPERSFRKFRLIAEDVQDRNV 99
Score = 135 bits (327), Expect = 6e-32
Identities = 61/85 (71%), Positives = 71/85 (83%)
Frame = +3
Query: 255 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 434
LCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYA
Sbjct: 100 LCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYA 159
Query: 435 QHTQVRAIRKKMCEIITRDVTNSEL 509
Q +QVR IR +M +IIT +V+ ++L
Sbjct: 160 QQSQVRKIRARMTDIITNEVSGADL 184
Score = 62.9 bits (146), Expect = 5e-10
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +2
Query: 509 REVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 628
+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+P
Sbjct: 185 KQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 224
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 142 bits (344), Expect = 5e-34
Identities = 68/85 (80%), Positives = 74/85 (87%)
Frame = +1
Query: 1 KGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 180
KG KKK+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADL
Sbjct: 15 KGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADL 74
Query: 181 QADTDAERSFRKFRLIAEYVQGRNV 255
Q D D ERSFRKFRLIAE VQ RNV
Sbjct: 75 QKDIDPERSFRKFRLIAEDVQDRNV 99
Score = 135 bits (327), Expect = 6e-32
Identities = 61/85 (71%), Positives = 71/85 (83%)
Frame = +3
Query: 255 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 434
LCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYA
Sbjct: 100 LCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYA 159
Query: 435 QHTQVRAIRKKMCEIITRDVTNSEL 509
Q +QVR IR +M +IIT +V+ ++L
Sbjct: 160 QQSQVRKIRARMTDIITNEVSGADL 184
Score = 62.9 bits (146), Expect = 5e-10
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +2
Query: 509 REVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 628
+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+P
Sbjct: 185 KQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 224
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 135 bits (327), Expect = 6e-32
Identities = 61/85 (71%), Positives = 71/85 (83%)
Frame = +3
Query: 255 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 434
LCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYA
Sbjct: 50 LCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYA 109
Query: 435 QHTQVRAIRKKMCEIITRDVTNSEL 509
Q +QVR IR +M +IIT +V+ ++L
Sbjct: 110 QQSQVRKIRARMTDIITNEVSGADL 134
Score = 62.9 bits (146), Expect = 5e-10
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +2
Query: 509 REVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 628
+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+P
Sbjct: 135 KQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 174
Score = 62.1 bits (144), Expect = 8e-10
Identities = 31/36 (86%), Positives = 31/36 (86%)
Frame = +1
Query: 148 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNV 255
GRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNV
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNV 49
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 132 bits (320), Expect = 4e-31
Identities = 65/86 (75%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 KGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-D 177
KG KKK+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ KGRVFEVSL D
Sbjct: 15 KGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPD 74
Query: 178 LQADTDAERSFRKFRLIAEYVQGRNV 255
LQ D D E SFRKFRLIAE VQ RNV
Sbjct: 75 LQKDIDPEHSFRKFRLIAEDVQDRNV 100
Score = 129 bits (312), Expect = 4e-30
Identities = 60/86 (69%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 434
LCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYA
Sbjct: 101 LCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYA 160
Query: 435 QHTQVRAIRK-KMCEIITRDVTNSEL 509
+QVR IR +M +IIT +V+ ++L
Sbjct: 161 HESQVRKIRSGRMTDIITNEVSGADL 186
Score = 62.9 bits (146), Expect = 5e-10
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +2
Query: 509 REVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 628
+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+P
Sbjct: 187 KQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 226
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 120 bits (288), Expect = 3e-27
Identities = 55/79 (69%), Positives = 65/79 (82%)
Frame = +3
Query: 273 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 452
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 453 AIRKKMCEIITRDVTNSEL 509
IR +M +IIT +V+ ++L
Sbjct: 61 KIRARMTDIITNEVSGADL 79
Score = 62.9 bits (146), Expect = 5e-10
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +2
Query: 509 REVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 628
+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+P
Sbjct: 80 KQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 119
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,520,979
Number of Sequences: 53049
Number of extensions: 739992
Number of successful extensions: 2339
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2338
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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